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Literature summary for 3.1.6.14 extracted from

  • Myette, J.R.; Soundararajan, V.; Shriver, Z.; Raman, R.; Sasisekharan, R.
    Heparin/heparan sulfate 6-O-sulfatase from Flavobacterium heparinum: integrated structural and biochemical investigation of enzyme active site and substrate specificity (2009), J. Biol. Chem., 284, 35177-35188.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3) cells Pedobacter heparinus

Protein Variants

Protein Variants Comment Organism
C80A inactive Pedobacter heparinus
D186A 53% relative activity after 0.5 h and 92% relative activity after 5 h compared to the wild type enzyme Pedobacter heparinus
D374A inactive Pedobacter heparinus

General Stability

General Stability Organism
the enzyme shows higher activity in acetate buffer when compared with sulfonate buffers such as MES and MOPS Pedobacter heparinus

Inhibitors

Inhibitors Comment Organism Structure
EDTA less than 20% activity in the presence of 1 mM EDTA Pedobacter heparinus
phosphate
-
Pedobacter heparinus
sulfate
-
Pedobacter heparinus

Metals/Ions

Metals/Ions Comment Organism Structure
Ca2+ stimulated 2-3fold by 5 mM Ca2+ Pedobacter heparinus

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
61570
-
calculated from amino acid sequence Pedobacter heparinus

Organism

Organism UniProt Comment Textmining
Pedobacter heparinus
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4-methylumbelliferyl N-acetyl-beta-D-glucosamine 6-sulfate + H2O
-
Pedobacter heparinus 4-methylumbelliferyl N-acetyl-beta-D-glucosamine + sulfate
-
?
alpha-D-glucosamine N2,O6-bissulfate + H2O
-
Pedobacter heparinus ?
-
?
additional information heparin/heparan sulfate 6-O-sulfatase is a predominantly exolytic enzyme that specifically acts on N-sulfated or N-acetylated 6-O-sulfated glucosamines present at the non-reducing end of heparin and heparan sulfate glycosaminoglycan oligosaccharide substrates Pedobacter heparinus ?
-
?
N-acetyl-D-glucosamine 6-sulfate + H2O
-
Pedobacter heparinus N-acetyl-D-glucosamine + sulfate
-
?

Synonyms

Synonyms Comment Organism
6-O-sulfatase
-
Pedobacter heparinus
glucosamine 6-O-sulfatase
-
Pedobacter heparinus
heparin/heparan sulfate 6-O-sulfatase
-
Pedobacter heparinus
HSGAG sulfatase
-
Pedobacter heparinus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
5.5 6.5
-
Pedobacter heparinus

pI Value

Organism Comment pI Value Maximum pI Value
Pedobacter heparinus calculated from amino acid sequence
-
8.6

IC50 Value

IC50 Value IC50 Value Maximum Comment Organism Inhibitor Structure
2
-
-
Pedobacter heparinus phosphate
20
-
-
Pedobacter heparinus sulfate