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Literature summary for 3.1.26.12 extracted from

  • Heck, C.; Evguenieva-Hackenberg, E.; Balzer, A.; Klug, G.
    RNase E enzymes from Rhodobacter capsulatus and Escherichia coli differ in context- and sequence-dependent in vivo cleavage within the polycistronic puf mRNA (1999), J. Bacteriol., 181, 7621-7625.
    View publication on PubMedView publication on EuropePMC

Protein Variants

Protein Variants Comment Organism
additional information modification of the RNase E recognition sequence at position 1205 within pufL affects the enzyme activity with substrate puf mRNA, overview Escherichia coli
additional information modification of the RNase E recognition sequence at position 1205 within pufL only slightly affects the enzyme activity with substrate puf mRNA, overview Rhodobacter capsulatus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
puf mRNA + H2O Escherichia coli degradation ?
-
?
puf mRNA + H2O Rhodobacter capsulatus degradation ?
-
?
puf mRNA + H2O Escherichia coli N3433 degradation ?
-
?

Organism

Organism UniProt Comment Textmining
Escherichia coli
-
-
-
Escherichia coli N3433
-
-
-
Rhodobacter capsulatus
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
puf mRNA + H2O degradation Escherichia coli ?
-
?
puf mRNA + H2O degradation Rhodobacter capsulatus ?
-
?
puf mRNA + H2O initiation of degradation of the 5' pufQ mRNA segment, expressed from plasmids pBPT8 or pBRMOD11 using the bla promoter of plasmid pBR322, the enzyme discriminates between the two sequences GGCUUU and GAUUUU preferring AU-rich sequences Escherichia coli ?
-
?
puf mRNA + H2O initiation of degradation of the pufLMX segment, the enzyme does not discriminate between the two sequences GGCUUU and GAUUUU Rhodobacter capsulatus ?
-
?
puf mRNA + H2O degradation Escherichia coli N3433 ?
-
?
puf mRNA + H2O initiation of degradation of the 5' pufQ mRNA segment, expressed from plasmids pBPT8 or pBRMOD11 using the bla promoter of plasmid pBR322, the enzyme discriminates between the two sequences GGCUUU and GAUUUU preferring AU-rich sequences Escherichia coli N3433 ?
-
?

Synonyms

Synonyms Comment Organism
RNase E
-
Escherichia coli
RNase E
-
Rhodobacter capsulatus