Organism | UniProt | Comment | Textmining |
---|---|---|---|
Physarum polycephalum | - |
- |
- |
Reaction | Comment | Organism | Reaction ID |
---|---|---|---|
Endonucleolytic cleavage to a 5'-phosphomonoester | B1 site, i.e. base recognition site for the base at 5'-side of scissile phosphodiester bond, and B2 site, i.e. base recognition site for the base at 3'-side of the scissile bond, identification | Physarum polycephalum |
Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
---|---|---|---|
additional information | - |
- |
Physarum polycephalum |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
ApA + H2O | - |
Physarum polycephalum | 5'-AMP + adenosine | - |
? | |
ApC + H2O | - |
Physarum polycephalum | 5'-CMP + adenosine | - |
? | |
ApG + H2O | - |
Physarum polycephalum | 5'-GMP + adenosine | - |
? | |
ApU + H2O | - |
Physarum polycephalum | 5'-UMP + adenosine | - |
? | |
CpA + H2O | - |
Physarum polycephalum | 5'-AMP + cytidine | - |
? | |
CpC + H2O | - |
Physarum polycephalum | 5'-CMP + cytidine | - |
? | |
CpG + H2O | - |
Physarum polycephalum | 5'-GMP + cytidine | - |
? | |
CpU + H2O | - |
Physarum polycephalum | 5'-UMP + cytidine | - |
? | |
GpA + H2O | - |
Physarum polycephalum | 5'-AMP + guanosine | - |
? | |
GpC + H2O | - |
Physarum polycephalum | 5'-CMP + guanosine | - |
? | |
GpG + H2O | - |
Physarum polycephalum | 5'-GMP + guanosine | - |
? | |
GpU + H2O | - |
Physarum polycephalum | 5'-UMP + guanosine | - |
? | |
additional information | substrate specificity | Physarum polycephalum | ? | - |
? | |
poly(I) + H2O | - |
Physarum polycephalum | 5'-IMP | - |
? | |
polyA + H2O | - |
Physarum polycephalum | AMP | - |
? | |
polyC + H2O | - |
Physarum polycephalum | 5'CMP | - |
? | |
polyU + H2O | - |
Physarum polycephalum | 5'UMP | - |
? | |
RNA + H2O | yeast RNA, base specificity of B1 site is A,G,U > C and of B2 A > G > C > U, depolymerization | Physarum polycephalum | mononucleotides | - |
? | |
UpA + H2O | - |
Physarum polycephalum | 5'-AMP + uridine | - |
? | |
UpC + H2O | - |
Physarum polycephalum | 5'-CMP + uridine | - |
? | |
UpG + H2O | - |
Physarum polycephalum | 5'-GMP + uridine | - |
? | |
UpU + H2O | - |
Physarum polycephalum | 5'-UMP + uridine | - |
? |
Synonyms | Comment | Organism |
---|---|---|
RNase Phyb | - |
Physarum polycephalum |
Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|
50 | - |
- |
Physarum polycephalum |
Temperature Stability Minimum [°C] | Temperature Stability Maximum [°C] | Comment | Organism |
---|---|---|---|
20 | 50 | stable upto 45°C, loss of approximately 30% activity at 50°C, inactive at 55°C | Physarum polycephalum |
Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
additional information | - |
additional information | - |
Physarum polycephalum |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
5 | - |
- |
Physarum polycephalum |
pH Stability | pH Stability Maximum | Comment | Organism |
---|---|---|---|
3 | 6 | very labile below pH 3.0, stable up to pH 6.0 | Physarum polycephalum |