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Literature summary for 3.1.11.2 extracted from

  • Nikitina, T.; Wang, D.; Gomberg, M.; Grigoryev, S.A.; Zhurkin, V.B.
    Combined micrococcal nuclease and exonuclease III digestion reveals precise positions of the nucleosome core/linker junctions: implications for high-resolution nucleosome mapping (2013), J. Mol. Biol., 425, 1946-1960.
    View publication on PubMed

Application

Application Comment Organism
analysis a combined treatment of nucleosomes with micrococcal nuclease and exonuclease III overcomes micrococcal nuclease sequence preference and produces nucleosomal DNA trimmed symmetrically and precisely at the core/linker junctions regardless of the underlying DNA sequence. Combined micrococcal nuclease/exonuclease III digestion can be applied to in situ chromatin for unbiased genome-wide mapping of nucleosome positions that is not ifluenced by DNA sequences at the core/linker junctions. The same approach can be also used for the precise mapping of the extent of linker DNA protection by H1 and other protein factors associated with nucleosome linkers Escherichia coli

Organism

Organism UniProt Comment Textmining
Escherichia coli
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Source Tissue

Source Tissue Comment Organism Textmining
commercial preparation
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Escherichia coli
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