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Literature summary for 3.1.1.32 extracted from

  • Sugimori, D.; Kano, K.; Matsumoto, Y.
    Purification, characterization, molecular cloning and extracellular production of a phospholipase A1 from Streptomyces albidoflavus NA297 (2012), FEBS open bio, 2, 318-327.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
gene pla, DNA and amino acid sequence determination and analysis, expression and extracellular production of the recombinant enzyme in Streptomyces lividans from expression vector pUC702/pla Streptomyces albidoflavus

Protein Variants

Protein Variants Comment Organism
H218A site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
H218R site-directed mutagenesis, the mutant shows highly reduced activity compared to the wild-type enzyme Streptomyces albidoflavus
S11A site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
S11D site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
S11E site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
S11T site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
S11Y site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
S216A site-directed mutagenesis, inactive mutant Streptomyces albidoflavus
S216D site-directed mutagenesis, the mutant shows highly reduced activity compared to the wild-type enzyme Streptomyces albidoflavus
S216E site-directed mutagenesis, the mutant shows highly reduced activity compared to the wild-type enzyme Streptomyces albidoflavus
S216T site-directed mutagenesis, the mutant shows 80-90% reduced activity compared to the wild-type enzyme Streptomyces albidoflavus
S216Y site-directed mutagenesis, the mutant shows 80-90% reduced activity compared to the wild-type enzyme Streptomyces albidoflavus

Inhibitors

Inhibitors Comment Organism Structure
2-mercaptoethanol weak inhibition Streptomyces albidoflavus
Ca2+ up to 0.1 mM Streptomyces albidoflavus
Fe2+
-
Streptomyces albidoflavus
Fe3+
-
Streptomyces albidoflavus
additional information the enzyme is not inhibited by EDTA and DTT Streptomyces albidoflavus
PMSF weak inhibition Streptomyces albidoflavus
SDS
-
Streptomyces albidoflavus
Triton X-100 weak inhibition at up to 0.23% w/v Streptomyces albidoflavus

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
2.38
-
phosphatidic acid pH 7.2, 50°C, recombinant enzyme Streptomyces albidoflavus

Localization

Localization Comment Organism GeneOntology No. Textmining
additional information the enzyme possesses a 33-residue N-terminal signal secretion sequence Streptomyces albidoflavus
-
-

Metals/Ions

Metals/Ions Comment Organism Structure
Ca2+ activates at 10 mM Streptomyces albidoflavus
additional information metal ion-independent phospholipase A1 Streptomyces albidoflavus

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
27199
-
1 * 27199, mature protein, seuence calculation, 1 * 28000, recombinant extracellular enzyme, SDS-PAGE Streptomyces albidoflavus
28000
-
DLS analysis Streptomyces albidoflavus

Organism

Organism UniProt Comment Textmining
Streptomyces albidoflavus K0J3J2 isolated from Japanese soil, gene pla
-
Streptomyces albidoflavus NA297 K0J3J2 isolated from Japanese soil, gene pla
-

Purification (Commentary)

Purification (Comment) Organism
recombinant extracellular enzyme to homogeneity from the culture supernatant by ammonium sulfate precipitation, hydrophobic interaction chromatography, and anion exchange chromatography Streptomyces albidoflavus

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
588 2873 pH 7.2, 50°C, purified recombinant enzyme Streptomyces albidoflavus

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1,2-dimyristoyl-sn-glycero-3-phosphate + H2O
-
Streptomyces albidoflavus ?
-
?
1,2-dimyristoyl-sn-glycero-3-phosphate + H2O
-
Streptomyces albidoflavus NA297 ?
-
?
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine + H2O
-
Streptomyces albidoflavus ?
-
?
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine + H2O
-
Streptomyces albidoflavus NA297 ?
-
?
1,2-dipalmitoyl-sn-glycero-3-phosphocholine + H2O
-
Streptomyces albidoflavus ?
-
?
1,2-dipalmitoyl-sn-glycero-3-phosphocholine + H2O
-
Streptomyces albidoflavus NA297 ?
-
?
L-alpha-phosphatidyl-L-serine + H2O substrate from Glycine max Streptomyces albidoflavus 2-acyl-1-glycerophosphoserine + a carboxylate
-
?
L-alpha-phosphatidylcholine + H2O PLA1 activity for egg yolk lecithin hydrolysis, substrate from egg yolk or Glycine max Streptomyces albidoflavus 2-acylglycerophosphocholine + a carboxylate
-
?
L-alpha-phosphatidylglycerol + H2O
-
Streptomyces albidoflavus ?
-
?
L-alpha-phosphatidylinositol + H2O
-
Streptomyces albidoflavus 2-acyl-sn-glycero-3-phosphoinositol + a carboxylate
-
?
lecithin + H2O from Glycine max Streptomyces albidoflavus ?
-
?
additional information the substrate specificity is pH-dependent, the enzyme preferably hydrolyzes phosphatidic acid and phosphatidylserine at pH 7.2, it is active with lysophosphatidylcholine, but not with triglyceride and the 4-nitrophenyl ester of fatty acids, substrate specificity, overview. At the reaction equilibrium, the molar ratio of released free fatty acids (sn-1:sn-2) is 63:37 Streptomyces albidoflavus ?
-
?
additional information the substrate specificity is pH-dependent, the enzyme preferably hydrolyzes phosphatidic acid and phosphatidylserine at pH 7.2, it is active with lysophosphatidylcholine, but not with triglyceride and the 4-nitrophenyl ester of fatty acids, substrate specificity, overview. At the reaction equilibrium, the molar ratio of released free fatty acids (sn-1:sn-2) is 63:37 Streptomyces albidoflavus NA297 ?
-
?
phosphatidic acid + H2O
-
Streptomyces albidoflavus 2-acyl-lysophosphatidic acid + a carboxylate
-
?
phosphatidic acid + H2O
-
Streptomyces albidoflavus NA297 2-acyl-lysophosphatidic acid + a carboxylate
-
?

Subunits

Subunits Comment Organism
monomer 1 * 27199, mature protein, seuence calculation, 1 * 28000, recombinant extracellular enzyme, SDS-PAGE Streptomyces albidoflavus

Synonyms

Synonyms Comment Organism
PLA1
-
Streptomyces albidoflavus

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
50
-
-
Streptomyces albidoflavus

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
20 70 activity range, profile overview Streptomyces albidoflavus

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
40
-
native and recombinant enzymes, stable at Streptomyces albidoflavus

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
630
-
phosphatidic acid pH 7.2, 50°C, recombinant enzyme Streptomyces albidoflavus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.2
-
-
Streptomyces albidoflavus

pH Range

pH Minimum pH Maximum Comment Organism
4 11 activity range, profile overview Streptomyces albidoflavus

pH Stability

pH Stability pH Stability Maximum Comment Organism
5.6 9 recombinant enzyme, stable at Streptomyces albidoflavus
7.2 9 native enzyme, stable at Streptomyces albidoflavus

General Information

General Information Comment Organism
additional information residue Ser11 is essential for the catalytic function of the enzyme, the active site may include residues Ser216 and His218 Streptomyces albidoflavus

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
265
-
phosphatidic acid pH 7.2, 50°C, recombinant enzyme Streptomyces albidoflavus