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Literature summary for 2.8.4.1 extracted from

  • Duin, E.C.; McKee, M.L.
    A new mechanism for methane production from methyl-coenzyme M reductase as derived from density functional calculations (2008), J. Phys. Chem. B, 112, 2466-2482.
    View publication on PubMed

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
CH3-S-CoM + HS-CoB Methanothermobacter marburgensis
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CoM-S-S-CoB + methane
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?

Organism

Organism UniProt Comment Textmining
Methanothermobacter marburgensis
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-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
CH3-S-CoM + HS-CoB
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Methanothermobacter marburgensis CoM-S-S-CoB + methane
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?
CH3-S-CoM + HS-CoB catalytic cycle and proton transfer mechanism and energetics, reaction complex formations and mechanism, detailed overview Methanothermobacter marburgensis CoM-S-S-CoB + methane
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?
additional information three general mechanisms for the catalytic production of methane by MCR: (1) the Ni-Me/Ragsdale pathway, (2) the Ni-Me/Thauer pathway, (3) the methyl radical pathway. Density functional calculations and electronic-structure calculations and analysis by computational methods, homolytic Ni-S/Ni-C bonds energies, overview Methanothermobacter marburgensis ?
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?

Synonyms

Synonyms Comment Organism
MCR
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Methanothermobacter marburgensis
methyl-coenzyme M reductase
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Methanothermobacter marburgensis

Cofactor

Cofactor Comment Organism Structure
F-430 binding structure, and different oxidation states F430 (Ni(I)/Ni(II)/Ni(III)), Ni(I) is the active state, overview Methanothermobacter marburgensis