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Literature summary for 2.8.4.1 extracted from

  • Ermler, U.; Grabarse, W.; Shima, S.; Goubeaud, M.; Thauer, R.K.
    Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation (1997), Science, 278, 1457-1462.
    View publication on PubMed

Activating Compound

Activating Compound Comment Organism Structure
Ti(III) citrate activation of the oxidized state of enzyme Methanothermobacter thermautotrophicus

Metals/Ions

Metals/Ions Comment Organism Structure
Ni(2+)
-
Methanothermobacter thermautotrophicus

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
300000
-
-
Methanothermobacter thermautotrophicus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
methyl coenzyme M + coenzyme B Methanothermobacter thermautotrophicus strictly anaerobic conditions methane + CoM-S-S-CoB
-
?
methyl coenzyme M + coenzyme B Methanothermobacter thermautotrophicus key enzyme in methane formation by methanogenic Archaea methane + CoM-S-S-CoB
-
?

Organism

Organism UniProt Comment Textmining
Methanothermobacter thermautotrophicus
-
-
-

Reaction

Reaction Comment Organism Reaction ID
methyl-CoM + CoB = CoM-S-S-CoB + methane proposed reaction mechanism uses a radical intermediate and a nickel organic compound. Suggested solutions for enzyme state, structure, reaction cycle and binding mechanism for the enzyme are given Methanothermobacter thermautotrophicus

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
methyl coenzyme M + coenzyme B strictly anaerobic conditions Methanothermobacter thermautotrophicus methane + CoM-S-S-CoB
-
?
methyl coenzyme M + coenzyme B key enzyme in methane formation by methanogenic Archaea Methanothermobacter thermautotrophicus methane + CoM-S-S-CoB
-
?

Subunits

Subunits Comment Organism
hexamer alpha2,beta2,gamma2 Methanothermobacter thermautotrophicus

Cofactor

Cofactor Comment Organism Structure
F-430
-
Methanothermobacter thermautotrophicus
additional information 2 molecules of the nickel porphinoid coenzyme F-430 are embedded between the subunits, forming 2 structurally identical active sites Methanothermobacter thermautotrophicus