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Literature summary for 2.7.7.6 extracted from

  • Obayashi, E.; Yoshida, H.; Kawai, F.; Shibayama, N.; Kawaguchi, A.; Nagata, K.; Tame, J.R.; Park, S.Y.
    The structural basis for an essential subunit interaction in influenza virus RNA polymerase (2008), Nature, 454, 1127-1131.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expression of His-tagged subunits PA and PB1 in Escherichia coli influenza A virus

Crystallization (Commentary)

Crystallization (Comment) Organism
a large fragment of subunit PA bound to a fragment of subunit PB1, hanging dropn vapour diffusion method, 20°C, mixing of 0.001 ml of protein solution, containing 10 mg/ml protein in 20 mM Tris-HCl, pH 8.0, and 100 mM sodium chloride, and 0.001 ml of reservoir solution consisting of 100 mM Tris-HCl, pH 7.5, and 2.4 M sodium formate, X-ray diffraction structure determination and analysis at 2.3 A resolution influenza A virus

Protein Variants

Protein Variants Comment Organism
L640D the mutant of the PA subunit shows reduced transcriptional activity compared to the wild-type enzyme influenza A virus
L666D the mutant of the PA subunit shows reduced transcriptional activity compared to the wild-type enzyme influenza A virus
V636S the mutant of the PA subunit shows reduced transcriptional activity compared to the wild-type enzyme influenza A virus
W706A the mutant of the PA subunit shows reduced transcriptional activity compared to the wild-type enzyme influenza A virus

Organism

Organism UniProt Comment Textmining
influenza A virus
-
-
-

Purification (Commentary)

Purification (Comment) Organism
recombinant His-tagged subunits PA and PB1 from Escherichia coli by nickel affinity chromatography influenza A virus

Subunits

Subunits Comment Organism
heterotrimer the three subunits, PB1, PB2 and PA, are all required for both transcription and replication, PB1 carries the polymerase active site, PB2 includes the capped-RNA recognition domain, and PA, whose C-terminal domain consists of 13 alpha-helices and 9 beta-strands, is involved in assembly of the functional complex. The subunit interface is important for virla replication, overview influenza A virus

Synonyms

Synonyms Comment Organism
RNA polymerase
-
influenza A virus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
8
-
assay at influenza A virus