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Literature summary for 2.7.11.24 extracted from

  • Bardwell, A.J.; Bardwell, L.
    Two hydrophobic residues can determine the specificity of mitogen-activated protein kinase docking interactions (2015), J. Biol. Chem., 290, 26661-26674.
    View publication on PubMedView publication on EuropePMC

Activating Compound

Activating Compound Comment Organism Structure
additional information the ERK2 MAPK is activated by phosphorylation through MEK1 and MEK2 Mus musculus
additional information the JNK1 MAPK is activated by phosphorylation through MKK4 and MKK7 Homo sapiens
additional information the JNK2 MAPK is activated by phosphorylation through MKK4 and MKK7 Homo sapiens
additional information the p38 MAPK is activated by phosphorylation through MKK3, MKK6, and MKK4 Homo sapiens

Cloned(Commentary)

Cloned (Comment) Organism
recombinant expression of GST-tagged enzyme Mus musculus
recombinant expression of GST-tagged enzyme Homo sapiens

Inhibitors

Inhibitors Comment Organism Structure
MKK4 wild-type and L44I mutant MKK4, the D-site from enzyme MKK4 competitively inhibits JNK-mediated phosphorylation of c-Jun and ATF2; wild-type MKK4, the D-site from enzyme MKK4 competitively inhibits JNK-mediated phosphorylation of c-Jun and ATF2 Homo sapiens
MKK4 mutant F48K the D-site from enzyme MKK4 competitively inhibits JNK-mediated phosphorylation of c-Jun and ATF2, but to a lesser degree compared to the wild-type MKK4; the D-site from enzyme MKK4 competitively inhibits JNK-mediated phosphorylation of c-Jun and ATF2, but to a lesser degree compared to the wild-type MKK4 Homo sapiens
MKK4 mutant L44I the D-site from enzyme MKK4 competitively inhibits JNK-mediated phosphorylation of c-Jun and ATF2; wild-type and L44I mutant MKK4, the D-site from enzyme MKK4 competitively inhibits JNK-mediated phosphorylation of c-Jun and ATF2 Homo sapiens
additional information no inhibition by MKK4 mutant L44I/F48K. Creation of MEK1-like, MEK2-like, MKK3-like, and MKK6-like alleles of MKK4 by changing 2 residues, L44 and F48, in the MKK4 D-site; no inhibition by MKK4 mutant L44I/F48K. Creation of MEK1-like, MEK2-like, MKK3-like, and MKK6-like alleles of MKK4 by changing 2 residues, L44 and F48, in the MKK4 D-site Homo sapiens

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required Mus musculus
Mg2+ required Homo sapiens

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + ATF2 Homo sapiens
-
ADP + phosphorylated ATF2
-
?
ATP + c-Jun Homo sapiens
-
ADP + phosphorylated c-Jun
-
?
ATP + Elk-1 Mus musculus an ETS family transcription factor ADP + phosphorylated Elk-1
-
?
ATP + Elk-1 Homo sapiens an ETS family transcription factor ADP + phosphorylated Elk-1
-
?
ATP + Net Mus musculus an ETS family transcription factor ADP + phosphorylated Net
-
?
ATP + Net Homo sapiens an ETS family transcription factor ADP + phosphorylated Net
-
?

Organism

Organism UniProt Comment Textmining
Homo sapiens P45983
-
-
Homo sapiens P45984
-
-
Homo sapiens Q15759
-
-
Mus musculus P63085
-
-

Posttranslational Modification

Posttranslational Modification Comment Organism
phosphoprotein MKKs efficiently phosphorylate their cognate, within-pathway MAPKs and do not appreciably phosphorylate MAPKs in other pathways. The ERK MAPK is activated by phosphorylation through MEK1 and MEK2 Mus musculus
phosphoprotein MKKs efficiently phosphorylate their cognate, within-pathway MAPKs and do not appreciably phosphorylate MAPKs in other pathways. The JNK1 MAPK is activated by phosphorylation through MKK4 and MKK7. MKK7 binds to JNK1 preferentially over JNK2 and does not bind to p38. MKK4 exhibits the highest affinity binding for JNK2, followed by JNK1 and then p38 Homo sapiens
phosphoprotein MKKs efficiently phosphorylate their cognate, within-pathway MAPKs and do not appreciably phosphorylate MAPKs in other pathways. The JNK2 MAPK is activated by phosphorylation through MKK4 and MKK7. MKK7 binds to JNK1 preferentially over JNK2 and does not bind to p38. MKK4 exhibits the highest affinity binding for JNK2, followed by JNK1 and then p38 Homo sapiens
phosphoprotein MKKs efficiently phosphorylate their cognate, within-pathway MAPKs and do not appreciably phosphorylate MAPKs in other pathways. The p38 MAPK is activated by phosphorylation through MKK3, MKK6, and MKK4. MKK7 binds to JNK1 preferentially over JNK2 and does not bind to p38. MKK4 exhibits the highest affinity binding for JNK2, followed by JNK1 and then p38 Homo sapiens

Source Tissue

Source Tissue Comment Organism Textmining
commercial preparation activated ERK2 Mus musculus
-
commercial preparation activated ERK2 Homo sapiens
-
commercial preparation activated JNK1alpha1 Homo sapiens
-
commercial preparation activated JNK2alpha2 Homo sapiens
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + ATF2
-
Homo sapiens ADP + phosphorylated ATF2
-
?
ATP + c-Jun
-
Homo sapiens ADP + phosphorylated c-Jun
-
?
ATP + Elk-1 an ETS family transcription factor Mus musculus ADP + phosphorylated Elk-1
-
?
ATP + Elk-1 an ETS family transcription factor Homo sapiens ADP + phosphorylated Elk-1
-
?
ATP + Elk-1 an ETS family transcription factor with modified D-site by swapping two hydrophobic residues Homo sapiens ADP + phosphorylated Elk-1
-
?
ATP + Net an ETS family transcription factor Mus musculus ADP + phosphorylated Net
-
?
ATP + Net an ETS family transcription factor Homo sapiens ADP + phosphorylated Net
-
?
ATP + Net an ETS family transcription factor with modified D-site by swapping two hydrophobic residues Homo sapiens ADP + phosphorylated Net
-
?
additional information MAPKs that are in different families (e.g. ERK, JNK, and p38) can bind selectively to D-sites in their authentic substrates and regulators while discriminating against D-sites in other pathways. The short hydrophobic region at the distal end of the D-site plays a critical role in determining the high selectivity of JNK MAPKs for docking sites in their cognate MAPK kinases. These specificity-determining differences are also found in the D-sites of the ETS family transcription factors Elk-1 and Net. Swapping two hydrophobic residues between these D-sites switches the relative efficiency of Elk-1 and Net as substrates for ERK versus JNK. Comparison of the hydrophobic submotif in strong versus weak JNK-binding D-sites, overview. The D-sites of the JNK pathway activator MKK4 contains LXL, as do all three of the D-sites in activator MKK7 in the first 3 residues of the hydrophobic submotif. MKK D-sites that bind JNK weakly lack an extended hydrophobic motif Homo sapiens ?
-
?

Synonyms

Synonyms Comment Organism
ERK2
-
Mus musculus
JNK1alpha1
-
Homo sapiens
JNK2alpha2
-
Homo sapiens
MAPK
-
Mus musculus
MAPK
-
Homo sapiens
MAPK1
-
Mus musculus
MAPK11
-
Homo sapiens
MAPK8
-
Homo sapiens
MAPK9
-
Homo sapiens
p38beta
-
Homo sapiens
Prkm1
-
Mus musculus

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
assay at Mus musculus
30
-
assay at Homo sapiens

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.5
-
assay at Mus musculus
7.5
-
assay at Homo sapiens

Cofactor

Cofactor Comment Organism Structure
ATP
-
Mus musculus
ATP
-
Homo sapiens

IC50 Value

IC50 Value IC50 Value Maximum Comment Organism Inhibitor Structure
0.002
-
pH 7.5, 30°C, wild-type MKK4, JNK1, substrate ATF2 Homo sapiens MKK4
0.003
-
pH 7.5, 30°C, JNK1, wild-type MKK4, substrate ATF2 Homo sapiens MKK4 mutant L44I
0.006
-
pH 7.5, 30°C, wild-type MKK4, JNK2, substrate c-Jun Homo sapiens MKK4
0.045
-
pH 7.5, 30°C, JNK2, wild-type MKK4, substrate c-Jun Homo sapiens MKK4 mutant L44I
0.3
-
pH 7.5, 30°C, JNK1, wild-type MKK4, substrate ATF2 Homo sapiens MKK4 mutant F48K
0.4
-
pH 7.5, 30°C, JNK2, wild-type MKK4, substrate c-Jun Homo sapiens MKK4 mutant F48K

General Information

General Information Comment Organism
metabolism MAPK cascade proteins bind to each other selectively via docking interactions Mus musculus
metabolism MAPK cascade proteins bind to each other selectively via docking interactions Homo sapiens
metabolism MAPK cascade proteins bind to each other selectively via docking interactions. The high selectivity of JNK family MAPKs for cognate binding partners is controlled by two key hydrophobic residues in the docking site Homo sapiens
additional information MAPKs that are in different families (e.g. ERK, JNK, and p38) can bind selectively to D-sites in their authentic substrates and regulators while discriminating against D-sites in other pathways. The D-sites of the ERK pathway activators MEK1 and MEK2 contain IXL and LXI, respectively, in the first 3 residues of the hydrophobic submotif Mus musculus
additional information MAPKs that are in different families (e.g. ERK, JNK, and p38) can bind selectively to D-sites in their authentic substrates and regulators while discriminating against D-sites in other pathways. The D-sites of the p38 activators MKK3 and MKK6 both contain LXI in the first 3 residues of the hydrophobic submotif Homo sapiens