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Literature summary for 1.9.6.1 extracted from
- The periplasmic nitrate reductase in Shewanella: the resolution, distribution and functional implications of two NAP isoforms, NapEDABC and NapDAGHB (2010), Microbiology, 156, 302-312.
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Shewanella amazonensis | - |
- |
- |
| Shewanella amazonensis SB2B | - |
- |
- |
| Shewanella baltica | - |
- |
- |
| Shewanella baltica OS155 | - |
- |
- |
| Shewanella baltica OS185 | - |
- |
- |
| Shewanella baltica OS195 | - |
- |
- |
| Shewanella baltica OS223 | - |
- |
- |
| Shewanella denitrificans | - |
- |
- |
| Shewanella denitrificans OS217 | - |
- |
- |
| Shewanella frigidimarina | - |
- |
- |
| Shewanella halifaxensis | - |
- |
- |
| Shewanella loihica | - |
- |
- |
| Shewanella loihica PV-4 | - |
- |
- |
| Shewanella oneidensis | - |
- |
- |
| Shewanella oneidensis MR-1 / ATCC 700550 | - |
- |
- |
| Shewanella pealeana | - |
- |
- |
| Shewanella piezotolerans | - |
- |
- |
| Shewanella piezotolerans WP3 | - |
- |
- |
| Shewanella putrefaciens | - |
- |
- |
| Shewanella putrefaciens CN-32 | - |
- |
- |
| Shewanella sediminis | - |
- |
- |
| Shewanella sp. | - |
- |
- |
| Shewanella sp. ANA-3 | - |
- |
- |
| Shewanella sp. MR-4 | - |
- |
- |
| Shewanella sp. MR-7 | - |
- |
- |
| Shewanella sp. W3-18-1 | - |
- |
- |
| Shewanella woodyi | - |
- |
- |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella sp. | nitrite + ferricytochrome + H2O | - |
? |  |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella putrefaciens | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella oneidensis | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella frigidimarina | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella halifaxensis | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella loihica | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella pealeana | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella piezotolerans | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella sediminis | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella woodyi | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella denitrificans | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella amazonensis | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella baltica | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella piezotolerans WP3 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella putrefaciens CN-32 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella baltica OS195 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella sp. ANA-3 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella baltica OS223 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella sp. W3-18-1 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella denitrificans OS217 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella baltica OS155 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella loihica PV-4 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella sp. MR-4 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella oneidensis MR-1 / ATCC 700550 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella baltica OS185 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella sp. MR-7 | nitrite + ferricytochrome + H2O | - |
? | |
| nitrate + ferrocytochrome | the reduction of nitrate catalysed by NAP takes place in the 90 kDa NapA subunit | Shewanella amazonensis SB2B | nitrite + ferricytochrome + H2O | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| NAP | - |
Shewanella sp. |
| NAP | - |
Shewanella putrefaciens |
| NAP | - |
Shewanella oneidensis |
| NAP | - |
Shewanella frigidimarina |
| NAP | - |
Shewanella halifaxensis |
| NAP | - |
Shewanella loihica |
| NAP | - |
Shewanella pealeana |
| NAP | - |
Shewanella piezotolerans |
| NAP | - |
Shewanella sediminis |
| NAP | - |
Shewanella woodyi |
| NAP | - |
Shewanella denitrificans |
| NAP | - |
Shewanella amazonensis |
| NAP | - |
Shewanella baltica |
| Nap-alpha | isoform | Shewanella sp. |
| Nap-alpha | isoform | Shewanella putrefaciens |
| Nap-alpha | isoform | Shewanella frigidimarina |
| Nap-alpha | isoform | Shewanella loihica |
| Nap-alpha | isoform | Shewanella pealeana |
| Nap-alpha | isoform | Shewanella piezotolerans |
| Nap-alpha | isoform | Shewanella sediminis |
| Nap-alpha | isoform | Shewanella woodyi |
| Nap-alpha | isoform | Shewanella denitrificans |
| Nap-alpha | isoform | Shewanella amazonensis |
| Nap-alpha | isoform | Shewanella baltica |
| NAP-beta | isoform | Shewanella sp. |
| NAP-beta | isoform | Shewanella putrefaciens |
| NAP-beta | isoform | Shewanella oneidensis |
| NAP-beta | isoform | Shewanella frigidimarina |
| NAP-beta | isoform | Shewanella halifaxensis |
| NAP-beta | isoform | Shewanella loihica |
| NAP-beta | isoform | Shewanella pealeana |
| NAP-beta | isoform | Shewanella piezotolerans |
| NAP-beta | isoform | Shewanella sediminis |
| NAP-beta | isoform | Shewanella woodyi |
| NAP-beta | isoform | Shewanella amazonensis |
| NAP-beta | isoform | Shewanella baltica |
| NapDAGHB | isoform | Shewanella sp. |
| NapDAGHB | isoform | Shewanella putrefaciens |
| NapDAGHB | isoform | Shewanella oneidensis |
| NapDAGHB | isoform | Shewanella frigidimarina |
| NapDAGHB | isoform | Shewanella halifaxensis |
| NapDAGHB | isoform | Shewanella loihica |
| NapDAGHB | isoform | Shewanella pealeana |
| NapDAGHB | isoform | Shewanella piezotolerans |
| NapDAGHB | isoform | Shewanella sediminis |
| NapDAGHB | isoform | Shewanella woodyi |
| NapDAGHB | isoform | Shewanella amazonensis |
| NapDAGHB | isoform | Shewanella baltica |
| NapEDABC | isoform | Shewanella sp. |
| NapEDABC | isoform | Shewanella putrefaciens |
| NapEDABC | isoform | Shewanella frigidimarina |
| NapEDABC | isoform | Shewanella loihica |
| NapEDABC | isoform | Shewanella pealeana |
| NapEDABC | isoform | Shewanella piezotolerans |
| NapEDABC | isoform | Shewanella sediminis |
| NapEDABC | isoform | Shewanella woodyi |
| NapEDABC | isoform | Shewanella denitrificans |
| NapEDABC | isoform | Shewanella amazonensis |
| NapEDABC | isoform | Shewanella baltica |
| periplasmic nitrate reductase | - |
Shewanella sp. |
| periplasmic nitrate reductase | - |
Shewanella putrefaciens |
| periplasmic nitrate reductase | - |
Shewanella oneidensis |
| periplasmic nitrate reductase | - |
Shewanella frigidimarina |
| periplasmic nitrate reductase | - |
Shewanella halifaxensis |
| periplasmic nitrate reductase | - |
Shewanella loihica |
| periplasmic nitrate reductase | - |
Shewanella pealeana |
| periplasmic nitrate reductase | - |
Shewanella piezotolerans |
| periplasmic nitrate reductase | - |
Shewanella sediminis |
| periplasmic nitrate reductase | - |
Shewanella woodyi |
| periplasmic nitrate reductase | - |
Shewanella denitrificans |
| periplasmic nitrate reductase | - |
Shewanella amazonensis |
| periplasmic nitrate reductase | - |
Shewanella baltica |
Cofactor
| Cofactor | Comment | Organism | Structure |
|---|---|---|---|
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella sp. | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella putrefaciens | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella oneidensis | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella frigidimarina | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella halifaxensis | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella loihica | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella pealeana | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella piezotolerans | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella sediminis | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella woodyi | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella denitrificans | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella amazonensis | |
| 4Fe-4S-center | the 90 kDa NapA subunit contains a one [4Fe-4S] iron-sulfur cluster | Shewanella baltica | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella sp. | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella putrefaciens | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella oneidensis | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella frigidimarina | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella halifaxensis | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella loihica | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella pealeana | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella piezotolerans | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella sediminis | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella woodyi | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella denitrificans | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella amazonensis | |
| molybdopterin | the 90 kDa NapA subunit contains a Mo-bis-molybdopterin guanine dinucleotide cofactor | Shewanella baltica | |
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