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Literature summary for 1.14.13.217 extracted from

  • Jiang, P.X.; Wang, H.S.; Xiao, S.; Fang, M.Y.; Zhang, R.P.; He, S.Y.; Lou, K.; Xing, X.H.
    Pathway redesign for deoxyviolacein biosynthesis in Citrobacter freundii and characterization of this pigment (2012), Appl. Microbiol. Biotechnol., 94, 1521-1532.
    View publication on PubMed

Protein Variants

Protein Variants Comment Organism
additional information deletion of gene vioD from the vioabcde gene cluster and recombinant expression of the modified vioabce gene cluster in Citrobacter freundii strain ACCC 05411, biosynthetic pathway of L-tryptophan to violacein in the wild-type and and deoxyviolacein in the vioD deletion mutant, overview. The absence of gene vioD appears to have no effect on cell growth of Citrobacter freundii compard to the untransfected wild-type Duganella sp.

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
protodeoxyviolaceinate + NAD(P)H + H+ + O2 Duganella sp.
-
protoviolaceinate + NAD(P)+
-
?
protodeoxyviolaceinate + NAD(P)H + H+ + O2 Duganella sp. B2
-
protoviolaceinate + NAD(P)+
-
?

Organism

Organism UniProt Comment Textmining
Duganella sp.
-
gene vioD
-
Duganella sp. B2
-
gene vioD
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
protodeoxyviolaceinate + NAD(P)H + H+ + O2
-
Duganella sp. protoviolaceinate + NAD(P)+
-
?
protodeoxyviolaceinate + NAD(P)H + H+ + O2
-
Duganella sp. B2 protoviolaceinate + NAD(P)+
-
?

Synonyms

Synonyms Comment Organism
VioD
-
Duganella sp.

Cofactor

Cofactor Comment Organism Structure
NADH
-
Duganella sp.
NADPH
-
Duganella sp.

General Information

General Information Comment Organism
malfunction biosynthetic pathway of L-tryptophan to violacein in the wild-type and and deoxyviolacein in the vioD deletion mutant, overview Duganella sp.
metabolism biosynthetic pathway of L-tryptophan to violacein in the wild-type and and deoxyviolacein in the vioD deletion mutant, NMR analysis of reactio products and intermediates, overview Duganella sp.