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Literature summary for 1.14.12.18 extracted from

  • Uhlik, O.; Jecna, K.; Mackova, M.; Vlcek, C.; Hroudova, M.; Demnerova, K.; Paces, V.; Macek, T.
    Biphenyl-metabolizing bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls as revealed by stable isotope probing (2009), Appl. Environ. Microbiol., 75, 6471-6477.
    View publication on PubMedView publication on EuropePMC

Organism

Organism UniProt Comment Textmining
Achromobacter sp.
-
-
-
Hydrogenophaga sp.
-
-
-
Methylophilus sp.
-
-
-
Methylovorus
-
-
-
Paenibacillus sp.
-
-
-
Pseudomonas alcaligenes
-
B-357
-
Pseudomonas alcaligenes B-357
-
B-357
-
Stenotrophomonas sp.
-
-
-
Variovorax sp.
-
-
-

Source Tissue

Source Tissue Comment Organism Textmining
additional information from bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls Pseudomonas alcaligenes
-
additional information from bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls Methylophilus sp.
-
additional information from bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls Stenotrophomonas sp.
-
additional information from bacterium present in the horseradish rhizosphere Variovorax sp.
-
additional information from bacterium present in the horseradish rhizosphere Methylovorus
-
additional information from bacterium, that dominates biphenyl metabolism in the horseradish rhizosphere soil Hydrogenophaga sp.
-
additional information from predominant biphenyl-utilizing bacteria in the initial bulk soil Paenibacillus sp.
-
additional information from second most abundant taxon present in the horseradish rhizosphere Achromobacter sp.
-

Synonyms

Synonyms Comment Organism
biphenyl dioxygenase
-
Achromobacter sp.
biphenyl dioxygenase
-
Pseudomonas alcaligenes
biphenyl dioxygenase
-
Paenibacillus sp.
biphenyl dioxygenase
-
Methylophilus sp.
biphenyl dioxygenase
-
Stenotrophomonas sp.
biphenyl dioxygenase
-
Variovorax sp.
biphenyl dioxygenase
-
Hydrogenophaga sp.
biphenyl dioxygenase
-
Methylovorus
BphA
-
Pseudomonas alcaligenes
BphA
-
Methylophilus sp.
BphA
-
Stenotrophomonas sp.