BRENDA - Enzyme Database show
show all sequences of 1.1.1.195

The cinnamyl alcohol dehydrogenase gene family in Populus: phylogeny, organization, and expression

Barakat, A.; Bagniewska-Zadworna, A.; Choi, A.; Plakkat, U.; DiLoreto, D.S.; Yellanki, P.; Carlson, J.E.; BMC Plant Biol. 9, 26 (2009)

Data extracted from this reference:

Localization
Localization
Commentary
Organism
GeneOntology No.
Textmining
additional information
14 of the 15 CAD genes are distributed on duplicated regions
Populus trichocarpa
-
-
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Populus trichocarpa
-
-
-
Source Tissue
Source Tissue
Commentary
Organism
Textmining
bark
all CAD genes expressed, but at different levels. Very low expression of CAD7
Populus trichocarpa
-
leaf
all CAD genes expressed, but at different levels. CAD13, CAD7,CAD12 are most highly expressed in leaves. CAD9 is preferentially expressed in leaves and xylem
Populus trichocarpa
-
additional information
CAD2, CAD3, CAD5, CAD6, CAD11, CAD14, CAD15 show no significant expression differences between tissues
Populus trichocarpa
-
petiole
all CAD genes expressed, but at different levels
Populus trichocarpa
-
xylem
all CAD genes expressed, but at different levels. CAD4 and CAD10 are strongly expressed in xylem, with CAD10 more expressed. CAD4 and CAD10 are 100 times more highly expressed than the other CAD genes. Very low expression of CAD7. CAD9 is preferentially expressed in leaves and xylem
Populus trichocarpa
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
additional information
CAD4 and CAD10 possess transcription factor binding motifs involved in development and in response to various stresses. CAD1, CAD2, CAD10, and CAD11 possess promoter motifs involved in the response to fungal elicitors. CAD2, CAD4, CAD5, CAD7, CAD9, rCAD10 and CAD16 possess motifs involved in response to wounding, herbivore stress, as well as other stresses
696998
Populus trichocarpa
?
-
-
-
-
Localization (protein specific)
Localization
Commentary
Organism
GeneOntology No.
Textmining
additional information
14 of the 15 CAD genes are distributed on duplicated regions
Populus trichocarpa
-
-
Source Tissue (protein specific)
Source Tissue
Commentary
Organism
Textmining
bark
all CAD genes expressed, but at different levels. Very low expression of CAD7
Populus trichocarpa
-
leaf
all CAD genes expressed, but at different levels. CAD13, CAD7,CAD12 are most highly expressed in leaves. CAD9 is preferentially expressed in leaves and xylem
Populus trichocarpa
-
additional information
CAD2, CAD3, CAD5, CAD6, CAD11, CAD14, CAD15 show no significant expression differences between tissues
Populus trichocarpa
-
petiole
all CAD genes expressed, but at different levels
Populus trichocarpa
-
xylem
all CAD genes expressed, but at different levels. CAD4 and CAD10 are strongly expressed in xylem, with CAD10 more expressed. CAD4 and CAD10 are 100 times more highly expressed than the other CAD genes. Very low expression of CAD7. CAD9 is preferentially expressed in leaves and xylem
Populus trichocarpa
-
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
additional information
CAD4 and CAD10 possess transcription factor binding motifs involved in development and in response to various stresses. CAD1, CAD2, CAD10, and CAD11 possess promoter motifs involved in the response to fungal elicitors. CAD2, CAD4, CAD5, CAD7, CAD9, rCAD10 and CAD16 possess motifs involved in response to wounding, herbivore stress, as well as other stresses
696998
Populus trichocarpa
?
-
-
-
-
Other publictions for EC 1.1.1.195
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
738304
Rong
A wheat cinnamyl alcohol dehyd ...
Triticum aestivum
Front. Plant Sci.
7
1723
2016
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1
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739331
Bhattacharyya
Transcriptome-wide identificat ...
Sinopodophyllum hexandrum
Plant Mol. Biol.
92
1-23
2016
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1
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8
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1
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8
1
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4
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8
8
723979
Pennacchio
Synthesis of cinnamyl alcohol ...
Geobacillus stearothermophilus
Appl. Biochem. Biotechnol.
170
1482-1490
2013
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4
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4
4
725800
Deng
Molecular cloning, functional ...
Camellia sinensis
J. Plant Physiol.
170
272-282
2013
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1
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2
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4
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725940
Cheng
Expression patterns of a cinna ...
Ginkgo biloba
Mol. Biol. Rep.
40
707-721
2013
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726086
Lee
Assessment of a putative proto ...
Arabidopsis thaliana
Org. Biomol. Chem.
11
1127-1134
2013
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4
739335
Sun
Molecular cloning and biochemi ...
Plagiochasma appendiculatum
Plant Physiol. Biochem.
70
133-141
2013
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10
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4
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10
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1
2
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10
2
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1
1
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1
10
10
739529
Zhao
Loss of function of cinnamyl a ...
Medicago truncatula
Proc. Natl. Acad. Sci. USA
110
13660-13665
2013
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725014
Seo
Unusual NADPH conformation in ...
Helicobacter pylori
FEBS Lett.
586
337-343
2012
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1
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726017
Fornale
Altered lignin biosynthesis im ...
Zea mays
Mol. Plant
5
817-830
2012
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726111
Santiago
Changes in cinnamyl alcohol de ...
Saccharum sp., Saccharum sp. B42231, Saccharum sp. My 5514
Physiol. Plant.
145
245-259
2012
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726189
Chen
Transposon insertion in a cinn ...
Zea mays
Plant Mol. Biol.
80
289-297
2012
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724491
Saathoff
-
Switchgrass contains two cinna ...
Panicum virgatum
Bioenergy Res.
4
120-133
2011
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7
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7
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7
7
724592
Nishimura
Characterization of two isozym ...
Streptomyces sp., Streptomyces sp. NL15-2K
Biosci. Biotechnol. Biochem.
75
1770-1777
2011
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4
5
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5
5
726428
Pandey
Cloning, expression, functiona ...
Leucaena leucocephala
Protein Expr. Purif.
79
197-203
2011
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712611
Ma
Functional analysis of a cinna ...
Triticum aestivum
J. Exp. Bot.
61
2735-2744
2010
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5
713262
Kim
Transcriptional regulation of ...
Ipomoea batatas, Ipomoea batatas cv. Yulmi
Plant Cell Rep.
29
779-791
2010
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696846
Zucca
Cofactor recycling for selecti ...
Saccharomyces cerevisiae
Biosci. Biotechnol. Biochem.
73
1224-1226
2009
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696998
Barakat
The cinnamyl alcohol dehydroge ...
Populus trichocarpa
BMC Plant Biol.
9
26
2009
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698623
Vidal
Characterization of an alcohol ...
Synechocystis sp.
J. Bacteriol.
191
4383-4391
2009
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699271
Bhuiyan
Gene expression profiling and ...
Triticum monococcum
J. Exp. Bot.
60
509-521
2009
1
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699800
Kovacik
Phenolic metabolism of Matrica ...
Matricaria chamomilla
J. Plant Physiol.
166
1460-1464
2009
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700730
Bedon
Sequence analysis and function ...
Picea glauca, Pinus taeda
Plant Cell Rep.
28
787-800
2009
1
1
2
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6
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700777
Li
FLEXIBLE CULM 1 encoding a cin ...
Oryza sativa Japonica Group
Plant Mol. Biol.
69
685-697
2009
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700832
Sattler
A nonsense mutation in a cinna ...
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Thigmomorphogenesis in Solanum ...
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Use of 1-methylcyclopropene fo ...
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686987
Tsuruta
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Isolation and characterization ...
Sorghum bicolor
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688654
Chen
Root and vascular tissue-speci ...
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689105
Ali
Methyl jasmonate and salicylic ...
Panax ginseng
Molecules
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689418
Jourdes
Plant cell walls are enfeebled ...
Arabidopsis thaliana
Phytochemistry
68
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2007
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689419
Kim
Expression of cinnamyl alcohol ...
Arabidopsis thaliana
Phytochemistry
68
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2007
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689438
Prats
Differential effects of phenyl ...
Hordeum vulgare, Triticum aestivum
Phytopathology
97
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2007
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Dauwe
Molecular phenotyping of ligni ...
Nicotiana tabacum
Plant J.
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Youn
Crystal structures and catalyt ...
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670596
Zhang
Gold-hull-and-internode2-gene ...
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Phenolics metabolism and ligni ...
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Hano
Differential accumulation of m ...
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Planta
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Eudes
Evidence for a role of AtCAD 1 ...
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Planta
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670974
Moeller
Lignification in cell cultures ...
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4
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4
1
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3
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Mee
Characterization of cinnamyl a ...
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13
1
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1
2
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3
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13
1
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7
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1
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-
13
1
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-
-
-
-
-
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670531
Sibout
Cinnamyl alcohol dehydrogenase ...
Arabidopsis thaliana
Plant Cell
17
2059-2076
2005
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1
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1
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2
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4
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2
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1
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1
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3
-
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670569
Damiani
Metabolite profiling reveals a ...
Nicotiana tabacum
Plant Mol. Biol.
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753-769
2005
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1
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3
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4
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2
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4
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4
4
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670603
Moeller
Gene silencing of cinnamyl alc ...
Pinus radiata
Plant Physiol. Biochem.
43
1061-1066
2005
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1
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1
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1
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5
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3
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1
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1
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1
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1
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3
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1
-
-
-
-
-
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-
-
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-
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670609
Ali
CO2-induced total phenolics in ...
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Plant Physiol. Biochem.
43
449-457
2005
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1
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1
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2
1
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Valencia
Apo and Holo structures of an ...
Saccharomyces cerevisiae
J. Mol. Biol.
341
1049-1062
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1
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1
1
1
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656769
Valerio
Down regulation of cinnamyl al ...
Eucalyptus camaldulensis
Mol. Breed.
12
157-167
2003
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1
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1
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1
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1
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1
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1
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1
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1
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656926
Ruelland
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Cellular and subcellular local ...
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Physiol. Plant.
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93-99
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657055
Sibout
Expression pattern of two para ...
Arabidopsis thaliana
Plant Physiol.
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848-860
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Blanco-Portales
Cloning, expression and immuno ...
Fragaria x ananassa
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347820
Mitchell
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Differential induction of cinn ...
Triticum aestivum
Planta
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31-37
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347822
Samaj
Immunolocalization of cinnamyl ...
Populus tremula x Populus alba
Planta
204
437-443
1998
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1
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10
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347823
Goffner
A novel aromatic alcohol dehyd ...
Eucalyptus gunnii
Plant Mol. Biol.
36
755-765
1998
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1
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3
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1
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-
347816
Logemann
A novel type of pathogen defen ...
Petroselinum crispum
Biol. Chem.
378
909-913
1997
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7
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347817
Nakashima
-
Immunocytochemical localizatio ...
Zinnia violacea
Plant Cell Physiol.
38
113-123
1997
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347815
Lauvergeat
Site-directed mutagenesis of a ...
Eucalyptus gunnii
Biochemistry
34
12426-12434
1995
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4
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3
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347821
Grima-Pettenati
Purification and characterizat ...
Phaseolus vulgaris
Phytochemistry
37
941-947
1994
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11
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347814
McKie
A molecular model for cinnamyl ...
Eucalyptus sp.
Biochim. Biophys. Acta
1202
61-69
1993
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347819
Hibino
Purification and partial seque ...
Aralia cordata
Phytochemistry
32
565-567
1993
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6
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1
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347818
O'Malley
Purification, characterization ...
Pinus taeda
Plant Physiol.
98
1364-1371
1992
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5
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2
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347802
Kush
Laticifer-specific gene expres ...
Hevea brasiliensis
Proc. Natl. Acad. Sci. USA
87
1787-1790
1990
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288231
Grima-Pettenati
-
Stimulation of lignification i ...
Vigna mungo
Plant Sci.
61
179-188
1989
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347804
Walter
Cinnamyl-alcohol dehydrogenase ...
Phaseolus vulgaris
Proc. Natl. Acad. Sci. USA
85
5546-5550
1988
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347805
Grand
Rapid induction by fungal elic ...
Phaseolus vulgaris
Eur. J. Biochem.
169
73-77
1987
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347806
Moerschbacher
-
An elicitor of the hypersensit ...
Triticum aestivum
Z. Naturforsch. C
41
839-844
1986
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288228
Sarni
Purification and properties of ...
Populus x canadensis
Eur. J. Biochem.
139
259-265
1984
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347808
Kutsuki
-
Regulatory role of cinnamyl al ...
Cryptomeria japonica, Erythrina crista-galli, Ginkgo biloba, Liriodendron tulipifera, Metasequoia glyptostroboides, Pinus thunbergii, Platycladus orientalis, Populus x canadensis, Prunus persica, Prunus yedoensis, Robinia pseudoacacia
Phytochemistry
21
19-23
1982
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288233
Luderitz
Enzymic synthesis of lignin pr ...
Picea abies
Eur. J. Biochem.
119
115-124
1981
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2
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347810
Kutsuki
Activities of some enzymes of ...
Metasequoia glyptostroboides, Platycladus orientalis, Robinia pseudoacacia
Planta
152
365-368
1981
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6
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347812
Wyrambik
Enzymic synthesis of lignin pr ...
Glycine max
Eur. J. Biochem.
97
503-509
1979
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347813
Klischies
-
Stereospecificity of cinnamoyl ...
Forsythia suspensa
Phytochemistry
17
1523-1525
1978
-
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347801
Wyrambik
Purification and properties of ...
Glycine max
Eur. J. Biochem.
59
9-15
1975
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12
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2
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12
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1
1
5
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2
2
-
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-
347811
Mansell
-
Purification and properties of ...
Abies nobilis, Acer campestre, Acer saccharinum, Athyrium filix-femina, Atrichum undulatum, Avena sativa, Betula pendula, Cichorium endivia, Corylus sp., Daucus carota, Equisetum arvense, Equisetum palustre, Forsythia suspensa, Ginkgo biloba, Helianthus annuus, Heracleum mantegazzianum, Hordeum sp., Ilex aquifolium, Larix kaempferi, Ligustrum vulgare, Linum usitatissimum, Liriodendron tulipifera, Metasequoia glyptostroboides, Morinda citrifolia, Nephrolepis exaltata, Picea abies, Pinus peuce, Pinus strobus, Pisum sativum, Platanus x hispanica, Populus nigra, Populus tremula, Prunus serotina, Pseudotsuga menziesii, Pteris cretica, Pteris wimsetti, Quercus robur, Quercus rubra, Salix alba, Salvinia natans, Sambucus racemosa, Secale cereale, Selaginella kraussiana, Selaginella martensii, Sorbus aucuparia, Sorbus domestica, Sphagnum sp., Syringa vulgaris, Taxus baccata, Thuja plicata, Woodwardia radicans, Zea mays
Phytochemistry
13
2427-2435
1974
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2
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52
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52
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16
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52
1
16
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