Related links
- Enzymes
- Biochemical Pathways
- Structure
- Sequence databases
- Organism classification
- Transcription regulation
- General server
1. Enzymes
- ExplorEnz (official portal for IUBMB Enzyme Nomenclature)
- Enzyme Nomenclature (alternative site)
- Expasy Enzyme Nomenclature Database
- IntEnz (Integrated relational Enzyme database)
- MEROPS - The Peptidase Database
- Thermodynamics of Enzyme-Catalyzed Reactions
- CAZy - Carbohydrate-Active enZYmes
- MACiE - Mechanism, Annotation and Classification in Enzymes
2. Biochemical Pathways
- KEGG - Kyoto Encyclopedia of Genes and Genomes
- MetaCyc
- Biochemical Pathways (digitized version of the identically named Roche wall chart)
3. Structure
4. Sequence databases
- EMBL Nucleotide Sequence Database
- GenBank (NCBI)
- DNA Data Bank of Japan (DDBJ)
- Swiss-Prot & UniProt
- PROSITE - Database of Protein Domains, Families and Functional Sites
- SYSTERS - Protein Family Database
- Pfam - Database of Protein Families (multiple alignments & HMMs)
- TIGRFAM - Protein families based on Hidden Markov Models or HMMs
5. Organism classification
- The NCBI Taxonomy Homepage
- UniProt Taxonomy
- DSMZ-German Collection of Microorganisms and Cell Cultures
- The Tree of Life
6. Transcription regulation
- TRANSFAC - The Transcription Factor Database
- PRODORIC - Database about Gene Regulation and Gene Expression in Prokaryotes
- RegulonDB - Transcriptional Network of Escherichia coli (K-12)