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Information on EC 6.2.1.16 - acetoacetate-CoA ligase and Organism(s) Rattus norvegicus and UniProt Accession Q9JMI1

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EC Tree
     6 Ligases
         6.2 Forming carbon-sulfur bonds
             6.2.1 Acid-thiol ligases
                6.2.1.16 acetoacetate-CoA ligase
IUBMB Comments
Also acts, more slowly, on L-3-hydroxybutanoate.
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This record set is specific for:
Rattus norvegicus
UNIPROT: Q9JMI1
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Word Map
The taxonomic range for the selected organisms is: Rattus norvegicus
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria, Archaea
Synonyms
acetoacetyl-coa synthetase, slaacs, acetoacetate-coa ligase, acetoacetyl coa synthetase, acetoacetyl-coa ligase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Acetoacetate--CoA ligase
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-
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Acetoacetyl CoA synthetase
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-
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Acetoacetyl-CoA ligase
Acetoacetyl-CoA synthase
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Acetoacetyl-CoA synthetase
Acetoacetyl-coenzyme A synthetase
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Synthetase, acetoacetyl coenzyme A
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-
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REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Acid-thiol ligation
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-
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SYSTEMATIC NAME
IUBMB Comments
acetoacetate:CoA ligase (AMP-forming)
Also acts, more slowly, on L-3-hydroxybutanoate.
CAS REGISTRY NUMBER
COMMENTARY hide
39394-62-2
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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
ATP + acetate + CoA
AMP + diphosphate + acetyl-CoA
show the reaction diagram
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45% of the activity relative to acetoacetate
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-
?
ATP + acetoacetate + CoA
AMP + diphosphate + acetoacetyl-CoA
show the reaction diagram
ATP + L-3-hydroxybutanoate + CoA
AMP + diphosphate + L-3-hydroxybutyryl-CoA
show the reaction diagram
additional information
?
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NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
ATP + acetoacetate + CoA
AMP + diphosphate + acetoacetyl-CoA
show the reaction diagram
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-
-
-
?
additional information
?
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COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Cs+
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can replace K+ in activation
K+
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monovalent cation required
Mn2+
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can replace Mg2+ in activation
NH4+
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can replace K+ in activation
Ni2+
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can replace Mg2+ in activation
Rb+
-
can replace K+ in activation
additional information
-
absolute requirement for a monovalent cation and a divalent cation
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
AMP
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5 mM, 70% inhibition
diphosphate
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10 mM, 70% inhibition
phosphate
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-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Tris
-
stimulates
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.008 - 0.07
acetoacetate
0.06
ATP
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0.01
CoA
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0.075
L-(+)-3-hydroxybutyrate
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SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.5 - 7.4
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-
7
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phosphate buffer
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6 - 9
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pH 6.0: about 30% of maximal activity, pH 9.0: about 65% of maximal activity
6.2 - 8.6
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about 65% of maximal activity at pH 6.2 and 8.6
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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Uniprot
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
expression of AACS mRNA in the cerebellum is restricted primarily to glial cells
Manually annotated by BRENDA team
in cerebral cortex expression of AACS mRNA is restricetd to neuronal cells
Manually annotated by BRENDA team
expression of AACS mRNA in the cerebellum is restricted primarily to glial cells
Manually annotated by BRENDA team
in cerebral cortex expression of AACS mRNA is restricetd to neuronal cells
Manually annotated by BRENDA team
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AACS mRNA is preferentially detected in mature adipocytes but not in preadipocytes. AACS mRNA expression in primary preadipocytes increases during the adipocyte differentiation
Manually annotated by BRENDA team
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lactating
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
AACS_RAT
672
0
75040
Swiss-Prot
other Location (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
100000
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gel filtration
71000
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1 * 71000, SDS-PAGE
80000
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gel filtration
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
monomer
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1 * 71000, SDS-PAGE
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
expression of a Streptomyces mevalonate pathway gene cluster starting from HMG-CoA synthase and including isopentenyl diphosphate isomerase, idi, type 2 gene and the yeast idi type 1 and rat acetoacetate-CoA ligase genes in Escherichia coli, overview
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
40% loss of activity on freezing and thawing without glycerol
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in presence of 5% glycerol the enzyme can be frozen and thawed five times without loss of activity
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STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, 0.1 mg/ml enzyme, 10 mM Tris-HCl, pH 7.5, 50% glycerol, 10 mM 2-mercaptoethanol, stable for at least 3 months
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PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
DNA and amino acid sequence determination, expression in Escherichia coli JM109, the engineered strain utilizes acetoacetate and can synthesize carotenoids, e.g. alpha-humulene, effectively, overview
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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Ito, M.; Fukui, T.; Kamokari, M.; Saito, T.; Tomita, K.
Purification and characterization of acetoacetyl-CoA synthetase from rat liver
Biochim. Biophys. Acta
794
183-193
1984
Rattus norvegicus
Manually annotated by BRENDA team
Bergstrom, J.D.; Edmond, J.
Rat liver acetoacetyl-CoA synthetase
Methods Enzymol.
110
3-9
1985
Rattus norvegicus
Manually annotated by BRENDA team
Bergstrom, J.D.; Edmond, J.
A radiochemical assay for acetoacetyl-CoA synthetase
Anal. Biochem.
149
358-364
1985
Homo sapiens, Rattus norvegicus, Zoogloea ramigera, Zoogloea ramigera 1-16-M / ATCC 19623
Manually annotated by BRENDA team
Stern, J.R.
A role of acetoacetyl-CoA synthetase in acetoacetate Utilization by rat liver cell fractions
Biochem. Biophys. Res. Commun.
44
1001-1007
1971
Rattus norvegicus
Manually annotated by BRENDA team
Bergstrom, J.D.; Wong, G.A.; Edwards, P.A.; Edmond, J.
The regulation of acetoacetyl-CoA synthetase activity by modulators of cholesterol synthesis in vivo and the utilization of acetoacetate for cholesterogenesis
J. Biol. Chem.
259
14548-14553
1984
Rattus norvegicus
Manually annotated by BRENDA team
Sato, H.; Takahashi, N.; Nakamoto, M.; Ohgami, M.; Yamazaki, M.; Fukui, T.
Effects of streptozotocin-induced diabetes on acetoacetyl-CoA synthetase activity in rats
Biochem. Pharmacol.
63
1851-1855
2002
Rattus norvegicus, Rattus norvegicus Sprague-Dawley
Manually annotated by BRENDA team
Nakamoto, M.; Takahashi, N.; Iwahori, A.; Sato, H.; Fukui, T.
Effects of development on acetoacetyl-CoA synthetase biosynthesis in rat liver
Biol. Pharm. Bull.
22
981-983
1999
Rattus norvegicus, Rattus norvegicus Sprague-Dawley
Manually annotated by BRENDA team
Iwahori, A.; Takahashi, N.; Nakamoto, M.; Iwama, M.; Fukui, T.
cDNA-derived amino acid sequence of acetoacetyl-CoA synthetase from rat liver
FEBS LETT.
466
239-243
2000
Rattus norvegicus, Rattus sp.
Manually annotated by BRENDA team
Yamasaki, M.; Hasegawa, S.; Suzuki, H.; Hidai, K.; Saitoh, Y.; Fukui, T.
Acetoacetyl-CoA synthetase gene is abundant in rat adipose, and related with fatty acid synthesis in mature adipocytes
Biochem. Biophys. Res. Commun.
335
215-219
2005
Rattus norvegicus
Manually annotated by BRENDA team
Ohnuki, M.; Takahashi, N.; Yamasaki, M.; Fukui, T.
Different localization in rat brain of the novel cytosolic ketone body-utilizing enzyme, acetoacetyl-CoA synthetase, as compared to succinyl-CoA:3-oxoacid CoA-transferase
Biochim. Biophys. Acta
1729
147-153
2005
Rattus norvegicus (Q9JMI1)
Manually annotated by BRENDA team
Yamasaki, M.; Hasegawa, S.; Kitani, T.; Hidai, K.; Fukui, T.
Differential effects of obesity on acetoacetyl-CoA synthetase gene in rat adipose tissues
Eur. J. Lipid Sci. Technol.
109
617-622
2007
Rattus norvegicus
-
Manually annotated by BRENDA team
Harada, H.; Yu, F.; Okamoto, S.; Kuzuyama, T.; Utsumi, R.; Misawa, N.
Efficient synthesis of functional isoprenoids from acetoacetate through metabolic pathway-engineered Escherichia coli
Appl. Microbiol. Biotechnol.
81
915-925
2008
Rattus norvegicus
Manually annotated by BRENDA team