Reference on EC 4.2.2.2 - pectate lyase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Sato, M.; Kaji, A.
Purification and properties of pectate lyase produced by Streptomyces fradiae IFO 3439
Agric. Biol. Chem.
39
819-824
1975
Streptomyces fradiae
-
Kamimiya, S.; Itho, Y.; Izaki, K.; Takahashi, H.
Purification and properties of a pectate lyase in Erwinia aroideae
Agric. Biol. Chem.
41
975-981
1977
Erwinia aroidea
-
Sato, M.; Kaji, A.
Purification and properties of pectate lyase produced by Streptomyces nitrosporeus
Agric. Biol. Chem.
41
2193-2197
1977
Streptomyces nitrosporeus
-
Sugiura, J.; Yasuda, M.; Kamimiya, S.; Izaki, K.; Takahashi, H.
Purification and properties of two pectate lyases produced by Erwinia carotovora
J. Gen. Appl. Microbiol.
30
167-175
1984
Pectobacterium carotovorum
-
Sato, M.; Kaji, A.
Another pectate lyase produced by Streptomyces nitrosporeus
Agric. Biol. Chem.
44
1345-1349
1980
Streptomyces nitrosporeus
-
Kelly, C.T.; Fogarty, W.M.
Production and properties of polygalacturonate lyase by an alkalophilic microorganism Bacillus sp. RK9
Can. J. Microbiol.
24
1164-1172
1978
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) RK9
Ofuya, C.O.
Physical properties of pectic polysaccharidases of Pseudomonas solanacearum from Nigeria
Curr. Microbiol.
10
141-146
1984
Ralstonia solanacearum
-
Ikotun, T.
Isolation, purification and assay of the macerating enzyme produced by Penicillium oxalicum Curie and Thom
Z. Allg. Mikrobiol.
24
247-252
1984
Penicillium oxalicum
McCarthy, R.E.; Kotarsky, S.F.; Salyers, A.A.
Location and characteristics of enzymes involved in the breakdown of polygalacturonic acid by Bacteroides thetaiotaomicron
J. Bacteriol.
161
493-499
1985
Bacteroides thetaiotaomicron
Ried, J.L.; Collmer, A.
Comparison of pectic enzymes produced by Erwinia chrysanthemi, Erwinia carotovora subsp. carotovora, and Erwinia carotovora subsp. atroseptica
Appl. Environ. Microbiol.
52
305-310
1986
Pectobacterium carotovorum, Dickeya chrysanthemi
Stutzenberger, F.J.
Inducible thermoalkalophilic polygalacturonate lyase from Thermomonospora fusca
J. Bacteriol.
169
2774-2780
1987
Thermobifida fusca
Lei, S.P.; Lin, H.C.; Wang, S.S.; Callaway, J.; Wilcox, G.
Characterization of the Erwinia carotovora pelB gene and its product pectate lyase
J. Bacteriol.
169
4379-4383
1987
Pectobacterium carotovorum
Barras, F.; Thurn, K.K.; Chatterjee, A.K.
Resolution of four pectate lyase structural genes of Erwinia chrysanthemi (EC16) and characterization of the enzymes produced in Escherichia coli
Mol. Gen. Genet.
209
319-325
1987
Dickeya chrysanthemi, Dickeya chrysanthemi EC16
Crawford, M.S.; Kolattukudy, P.E.
Pectate lyase from Fusarium solani f. sp. pisi: purification, characterization, in vitro translation of the mRNA, and involvement in pathogenicity
Arch. Biochem. Biophys.
258
196-205
1987
Fusarium solani
Nagel, C.W.; Vaughn, R.H.
The degradation of oligogalacturonides by the polygalacturonase of Bacillus polymyxa
Arch. Biochem. Biophys.
94
328-332
1961
Paenibacillus polymyxa
Nasuno, S.; Starr, M.P.
Polygalacturonic acid trans-eliminase of Xanthomonas campestris
Biochem. J.
104
178-185
1967
Xanthomonas campestris
Kozianowsky, G.; Canganella, F.; Rainey, F.A.; Hippe, H.; Antranikian, G.
Purification and characterization of thermostable pectate-lyases from a newly isolated thermophilic bacterium, Thermoanaerobacter italicus sp. nov
Extremophiles
1
171-182
1997
Thermoanaerobacter italicus
Kobayashi, T.; Hatada, Y.; Higaki, N.; Lusterio, D.D.; Ozawa, T.; Koike, K.; Kawai, S.; Ito, S.
Enzymatic properties and deduced amino acid sequence of a high-alkaline pectate lyase from an alkaliphilic Bacillus isolate
Biochim. Biophys. Acta
1427
145-154
1999
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-P7
Pissavin, C.; Robert-Baudouy, J.; Hugouvieux-Cotte-Pattat, N.
Biochemical characterization of the pectate lyase PelZ of Erwinia chrysanthemi 3937
Biochim. Biophys. Acta
1383
188-196
1998
Dickeya chrysanthemi, Dickeya chrysanthemi 3937
Huertas-Gonzalez, M.D.; Ruiz-Roldan, M.C.; Roncero, M.I.G.; diPietro, A.
Cloning and characterization of pl1 encoding an in planta-secreted pectate lyase of Fusarium oxysporum
Curr. Genet.
35
36-40
1999
Fusarium oxysporum
Yoshida, A.; Ito, K.; Kamio, Y.; Izaki, K.
Purification and properties of pectate lyase III of Erwinia carotovora Er
Agric. Biol. Chem.
55
601-602
1991
Pectobacterium carotovorum
-
Miyazaki, Y.
Purification and characterization of endo-pectate lyase from Bacillus macerans
Agric. Biol. Chem.
55
25-30
1991
Paenibacillus macerans
-
Roy, C.; Kester, H.; Visser, J.; Shevchik, V.; Hugouvieux-Cotte-Pattat, N.; Robert-Baudouy, J.; Benen, J.
Modes of action of five different endopectate lyases from Erwinia chrysanthemi 3937 [published erratum appears in J Bacteriol 1999 Sep;181(18):5889
J. Bacteriol.
181
3705-3709
1999
Dickeya chrysanthemi, Dickeya chrysanthemi 3937
Tardy, F.; Nasser, W.; Robert-Baudouy, J.; Hugouvieux-Cotte-Pattat, N.
Comparative analysis of the five major Erwinia chrysanthemi pectate lyases: enzyme characteristics and potential inhibitors
J. Bacteriol.
179
2503-2511
1997
Dickeya chrysanthemi
Guo, W.; Gonzalez-Candelas, L.; Kolattukudy, P.E.
Cloning of a novel constitutively expressed pectate lyase gene pelB from Fusarium solani f. sp. pisi (Nectria haematococca, mating type VI) and characterization of the gene product expressed in Pichia pastoris
J. Bacteriol.
177
7070-7077
1995
Fusarium solani
Nasser, W.; Awade, A.C.; Reverchon, S.; Robert-Baudouy, J.
Pectate lyase from Bacillus subtilis: molecular characterization of the gene, and properties of the cloned enzyme
FEBS Lett.
335
319-326
1993
Bacillus subtilis
Sakamoto, T.; Hours, R.A.; Sakai, T.
Purification, characterization, and production of two pectic transeliminases with protopectinase activity from Bacillus subtilis
Biosci. Biotechnol. Biochem.
58
353-358
1994
Bacillus subtilis
Nasser, W.; Chalet, F.; Robert-Baudouy, J.
Purification and characterization of extracellular pectate lyase from Bacillus subtilis
Biochimie
72
689-695
1990
Bacillus subtilis, Bacillus subtilis SO113
Kobayashi, T.; Koike, K.; Yoshimatsu, T.; Higaki, N.; Suzumatsu, A.; Ozawa, T.; Hatada, Y.; Ito, S.
Purification and properties of a low-molecular-weight, high-alkaline pectate lyase from an alkaliphilic strain of Bacillus
Biosci. Biotechnol. Biochem.
63
65-72
1999
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-P15
Wattad, C.; Dinoor, A.; Prusky, D.
Purification of pectate lyase produced by Colletotrichum gloeosporioides and its inhibition by epicatechin: a possible factor involved in the resistance of unripe avocado fruits to anthracnose
Mol. Plant Microbe Interact.
7
293-297
1994
Colletotrichum gloeosporioides
Guo, W.; Gonzales-Candelas, L.; Kolattukudy, P.E.
Cloning of a new pectate lyase gene pelC from Fusarium solani f. sp. pisi (Nectria haematococca, mating type VI) and characterization of the gene product expressed in Pichia pastoris
Arch. Biochem. Biophys.
323
352-360
1995
Fusarium solani
Guo, W.; Gonzalez-Candelas, L.; Kolattukudy, P.E.
Identification of a novel pelD gene expressed uniquely in planta by Fusarium solani f. sp. pisi (Nectria haematococca, mating type VI) and characterization of its protein product as an endo-pectate lyase
Arch. Biochem. Biophys.
332
305-312
1996
Fusarium solani
Bauer, D.W.; Collmer, A.
Molecular cloning, characterization, and mutagenesis of a pel gene from Pseudomonas syringae pv. lachyrmans encoding a member of the Erwinia chrysanthemi pelADE family of pectate lyases
Mol. Plant Microbe Interact.
10
369-379
1997
Pseudomonas syringae
McMillan, G.P.; Johnston, D.J.; Perombelon, M.C.M.
Purification to homogeneity of extracellular polygalacturonase and isoenzymes of pectate lyase of Erwinia carotovora subsp. atroseptica by column chromatography
J. Appl. Bacteriol.
73
83-86
1992
Pectobacterium carotovorum
-
Brhlmann, F.
Purification and characterization of an extracellular pectate lyase from an amycolata sp.
Appl. Environ. Microbiol.
61
3580-3585
1995
Pseudonocardia sp.
Heikinheimo, R.; Flego, D.; Pirhonen, M.; Karlsson, M.B.; Eriksson, A.; Maee, A.; Koiv, V.; Palva, E.P.
Characterization of a novel pectate lyase from Erwinia carotovora subsp. carotovora
Mol. Plant Microbe Interact.
8
207-217
1995
Pectobacterium carotovorum
Liao, C.H.; Revear, L.; Hotchkiss, A.; Savary, B.
Genetic and biochemical characterization of an exopolygalacturonase and a pectate lyase from Yersinia enterolitica
Can. J. Microbiol.
45
396-403
1999
Yersinia enterocolitica (O68975), Yersinia enterocolitica
Doan, C.N.; Caughron, M.K.; Myers, J.C.; Breakfield, N.W.; Oliver, R.L.; Yoder, M.D.
Purification, crystallization and X-ray analysis of crystals of pectate lyase A from Erwinia chrysanthemi
Acta Crystallogr. Sect. D
56
351-353
2000
Dickeya chrysanthemi, Dickeya chrysanthemi EC16
-
Akita, M.; Suzuki, A.; Kobayashi, T.; Ito, S.; Yamane, T.
Crystallization and preliminary X-ray analysis of high-alkaline pectate lyase
Acta Crystallogr. Sect. D
56
749-750
2000
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-P15
-
Akita, M.; Suzuki, A.; Kobayashi, T.; Ito, S.; Yamane, T.
The first structure of pectate lyase belonging to polysaccharide lyase family 3
Acta Crystallogr. Sect. D
57
1786-1792
2001
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-P15
Thomas, L.M.; Doan, C.N.; Oliver, R.L.; Yoder, M.D.
Structure of pectate lyase A: comparison to other isoforms
Acta Crystallogr. Sect. D
58
1008-1015
2002
Dickeya chrysanthemi, Dickeya chrysanthemi EC16
Novoa de Armas, H.; Rabijns, A.; Verboven, C.; Desair, J.; Vande Broek, A.; Vanderleyden, J.; de Ranter, C.
Crystallization and preliminary X-ray diffraction analysis of a novel pectate lyase from Azospirillum irakense
Acta Crystallogr. Sect. D
58
292-295
2002
Niveispirillum irakense
McDonough, M.A.; Ryttersgaard, C.; Bjornvad, M.E.; Lo Leggio, L.; Schulein, M.; Schroder Glad, S.O.; Larsen, S.
Crystallization and preliminary X-ray characterization of a thermostable pectate lyase from Thermotoga maritima
Acta Crystallogr. Sect. D
58
709-711
2002
Thermotoga maritima (Q9WYR4), Thermotoga maritima
Dehdashti, S.J.; Doan, C.N.; Chao, K.L.; Yoder, M.D.
Effect of mutations in the T1.5 loop of pectate lyase A from Erwinia chrysanthemi EC16
Acta Crystallogr. Sect. D
59
1339-1342
2003
Dickeya chrysanthemi, Dickeya chrysanthemi EC16
Nakaniwa, T.; Tada, T.; Ishii, K.; Takao, M.; Sakai, T.; Nishimura, K.
Crystallization and preliminary X-ray analysis of a thermostable pectate lyase PL 47 from Bacillus sp. TS 47
Acta Crystallogr. Sect. D
59
341-342
2003
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) TS 47
Charnock, S.J.; Brown, I.E.; Turkenburg, J.P.; Black, G.W.; Davies, G.J.
Characterization of a novel pectate lyase, Pel10A, from Pseudomonas cellulosa
Acta Crystallogr. Sect. D
D57
1141-1143
2001
Cellvibrio japonicus
Yakoby, N.; Kobiler, I.; Dinoor, A.; Prusky, D.
pH regulation of pectate lyase secretion modulates the attack of Colletotrichum gloeosporioides on avocado fruits
Appl. Environ. Microbiol.
66
1026-1030
2000
Colletotrichum gloeosporioides
Drori, N.; Kramer-Haimovich, H.; Rollins, J.; Dinoor, A.; Okon, Y.; Pines, O.; Prusky, D.
External pH and nitrogen source affect secretion of pectate lyase by Colletotrichum gloeosporioides
Appl. Environ. Microbiol.
69
3258-3262
2003
Colletotrichum gloeosporioides (Q8J254), Colletotrichum gloeosporioides
Hurlbert, J.C.; Preston, J.F.3rd.
Functional implications of the b-helical protein fold: Differences in chemical and thermal stabilities of Erwinia chrysanthemi EC16 pectate lyases B, C, and E
Arch. Biochem. Biophys.
381
264-272
2000
Dickeya chrysanthemi, Dickeya chrysanthemi EC16
Dixit, V.S.; Kumar, A.R.; Pant, A.; Khan, M.I.
Low molecular mass pectate lyase from Fusarium moniliforme: similar modes of chemical and thermal denaturation
Biochem. Biophys. Res. Commun.
315
477-484
2004
Fusarium verticillioides
Matsumoto, T.; Katsura, D.; Kondo, A.; Fukuda, H.
Efficient secretory overexpression of Bacillus subtilis pectate lyase in Escherichia coli and single-step purification
Biochem. Eng. J.
12
175-179
2002
Bacillus subtilis, Bacillus subtilis IFO3134
-
Brown, I.E.; Mallen, M.H.; Charnock, S.J.; Davies, G.J.; Black, G.W.
Pectate lyase 10A from Pseudomonas cellulosa is a modular enzyme containing a family 2a carbohydrate-binding module
Biochem. J.
355
155-165
2001
Cellvibrio japonicus
Benen, J.A.; Kester, H.C.; Parenicova, L.; Visser, J.
Characterization of Aspergillus niger pectate lyase A
Biochemistry
39
15563-15569
2000
Aspergillus niger (Q9C2Z0), Aspergillus niger
Kamen, D.E.; Griko, Y.; Woody, R.W.
The stability, structural organization, and denaturation of pectate lyase C, a parallel beta-helix protein
Biochemistry
39
15932-15943
2000
Dickeya chrysanthemi
Ogawa, A.; Sawada, K.; Saito, K.; Hakamada, Y.; Sumitomo, N.; Hatada, Y.; Kobayashi, T.; Ito, S.
A new high-alkaline and high-molecular-weight pectate lyase from a Bacillus isolate: enzymatic properties and cloning of the gene for the enzyme
Biosci. Biotechnol. Biochem.
64
1133-1141
2000
Bacillus sp. (in: Bacteria) (Q9XDT1), Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-P15 (Q9XDT1)
Takao, M.; Nakaniwa, T.; Yoshikawa, K.; Terashita, T.; Sakai, T.
Purification and characterization of thermostable pectate lyase with protopectinase activity from thermophilic Bacillus sp. TS 47
Biosci. Biotechnol. Biochem.
64
2360-2367
2000
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) TS 47
Ding, F.; Noritomi, H.; Nagahama, K.
Optimization of fermentation conditions for preparation of polygalacturonic acid transeliminase by Erwinia carotovora IFO3830
Biotechnol. Prog.
17
311-317
2001
Pectobacterium carotovorum, Pectobacterium carotovorum IFO3830
Sawada, K.; Ogawa, A.; Ozawa, T.; Sumitomo, N.; Hatada, Y.; Kobayashi, T.; Ito, S.
Nucleotide and amino-acid sequences of a new-type pectate lyase from an alkaliphilic strain of Bacillus
Eur. J. Biochem.
267
1510-1515
2000
Bacillus sp. (in: Bacteria) (Q9XDT2), Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-P15 (Q9XDT2)
Hatada, Y.; Saito, K.; Koike, K.; Yoshimatsu, T.; Ozawa, T.; Kobayashi, T.; Ito, S.
Deduced amino-acid sequence and possible catalytic residues of a novel pectate lyase from an alkaliphilic strain of Bacillus
Eur. J. Biochem.
267
2268-2275
2000
Bacillus sp. (in: Bacteria) (Q9RHW0), Bacillus sp. (in: Bacteria) KSM-P15 (Q9RHW0)
Walker, S.G.; Ryan, M.E.
Cloning and expression of a pectate lyase from the oral spirochete Treponema pectinovorum ATCC 33768
FEMS Microbiol. Lett.
226
385-390
2003
Treponema pectinovorum (Q7X0P2), Treponema pectinovorum
Mitsuiki, S.; Eguchi, H.; Hara, Y.; Sakai, M.; Moriyama, Y.; Goto, M.; Furukawa, K.
Purification and some properties of pectate lyase from alkaliphilic Nocardiopsis sp. TOA-1
J. Appl. Glycosci.
49
497-500
2002
Nocardiopsis sp., Nocardiopsis sp. TOA-1
-
Miyairi, K.; Nishida, K.; Takarae, M.; Shikanai, Y.; Okuno, T.
Purification and characterization of pectate lyase I and II from fungus Stereum purpureum
J. Appl. Glycosci.
49
99-106
2002
Chondrostereum purpureum
-
Miyairi, K.; Ogasawara, A.; Tonouchi, A.; Hosaka, K.; Kudou, M.; Okuno, T.
Low-molecular-weight pectate lyase from Streptomyces thermocarboxydus
J. Appl. Glycosci.
51
1-7
2004
Streptomyces thermocarboxydus
-
Herron, S.R.; Scavetta, R.D.; Garrett, M.; Legner, M.; Jurnak, F.
Characterization and implications of Ca2+ binding to pectate lyase C
J. Biol. Chem.
278
12271-12277
2003
Dickeya chrysanthemi
Jenkins, J.; Shevchik, V.E.; Hugouvieux-Cotte-Pattat, N.; Pickersgill, R.W.
The crystal structure of pectate lyase Pel9A from Erwinia chrysanthemi
J. Biol. Chem.
279
9139-9145
2004
Dickeya chrysanthemi
Nakajima, N.; Ishihara, K.; Tanabe, M.; Matsubara, K.; Matsuura, Y.
Degradation of pectic substances by two pectate lyases from a human intestinal bacterium, Clostridium butyricum-beijerinckii group
J. Biosci. Bioeng.
88
331-333
1999
Clostridium beijerinckii, Clostridium butyricum
Soriano, M.; Blanco, A.; Diaz, P.; Pastor, F.I.
An unusual pectate lyase from a Bacillus sp. with high activity on pectin: cloning and characterization
Microbiology
146
89-95
2000
Bacillus sp. (in: Bacteria) (Q9X6Z2), Bacillus sp. (in: Bacteria) BP-23 (Q9X6Z2)
-
Scavetta, R.D.; Herron, S.R.; Hotchkiss, A.T.; Kita, N.; Keen, N.T.; Benen, J.A.E.; Kester, H.C.M.; Visser, J.; Jurnak, F.
Structure of a plant cell wall fragment complexed to pectate lyase C
Plant Cell
11
1081-1092
1999
Dickeya chrysanthemi
Herron, S.R.; Benen, J.A.E.; Scavetta, R.D.; Visser, J.; Jurnak, F.
Structure and function of pectic enzymes: virulence factors of plant pathogens
Proc. Natl. Acad. Sci. USA
97
8762-8769
2000
Dickeya chrysanthemi
Castang, S.; Shevchik, V.E.; Hugovieux-Cotte-Pattat, N.; et.al.
Crystallization of the pectate lyase PelI from Erwinia chrysanthemi and SAD phasing of a golf derivative
Acta Crystallogr. Sect. D
60
190-192
2004
Dickeya chrysanthemi
Novoa de Armas, H.; Verboven, C.; de Ranter, C.; et.al.
Azospirillum irakense pectate lyase displays a totoidal fold
Acta Crystallogr. Sect. D
60
999-1007
2004
Niveispirillum irakense
Si Si, H.; Kurokawa, J.; Suryani; Kimura, T.; Ohmiya, K.; Sakka, K.
A novel thermophilic pectate lyase containing two catalytic modules of Clostridium stercorarium
Biosci. Biotechnol. Biochem.
69
2138-2145
2005
Thermoclostridium stercorarium (Q76EC9), Thermoclostridium stercorarium, Thermoclostridium stercorarium F-9 (Q76EC9)
Si Si, H.; Kikuta, T.; Sakka, M.; Kimura, T.; Sakka, K.
Enzymatic properties of two catalytic modules of Clostridium stercorarium pectate lyase Pel9A
Biosci. Biotechnol. Biochem.
70
667-671
2006
Thermoclostridium stercorarium (Q76EC9), Thermoclostridium stercorarium
Soriano, M.; Diaz, P.; Pastor, F.I.
Pectinolytic systems of two aerobic sporogenous bacterial strains with high activity on pectin
Curr. Microbiol.
50
114-118
2005
Bacillus sp. (in: Bacteria), Paenibacillus sp., Bacillus sp. (in: Bacteria) BP-7, Paenibacillus sp. BP-23
Klu-Santner, B.G.; Schnitzhofer, W.; et.al.
Purification and characterization of a new bioscouring pectate lyase from Bacillus pumilus BK2
J. Biotechnol.
121
390-401
2006
Bacillus pumilus, Bacillus pumilus BK2
Margesin, R.; Fauster, V.; Fonteyne, P.A.
Characterization of cold-active pectate lyase from psychrophilic Mrakia frigida
Lett. Appl. Microbiol.
40
453-459
2005
Bacillus subtilis, Mrakia frigida
Paggi, R.A.; Rodriguez, C.; Fay, J.P.
Growth and pectate-lyase activity of the ruminal bacterium Lachnospira multiparus in the presence of short-chain organic acids
Lett. Appl. Microbiol.
41
434-439
2005
Lachnospira multipara, Lachnospira multipara D32
Soriano, M.; Diaz, P.; Pastor, F.I.J.
Pectate lyase C from Bacillus subtilis: a novel endo-cleaving enzyme with activity on highly methylated pectin
Microbiology
152
617-625
2006
Bacillus subtilis
Kikuchi, T.; Shibuya, H.; Aikawa, T.; Jones, J.T.
Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphelenchus xylophilus
Mol. Plant Microbe Interact.
19
280-287
2006
Bursaphelenchus xylophilus (Q33CQ4), Bursaphelenchus xylophilus
Payasi, A.; Misra, P.C.; Sanwal, G.G.
Purification and characterization of pectate lyase from banana (Musa acuminata) fruits
Phytochemistry
67
861-869
2006
Musa acuminata
Payasi, A.; Misra, P.C.; Sanwal, G.G.
Effect of phytohormones on pectate lyase activity in ripening Musca acuminata
Plant Physiol. Biochem.
42
861-865
2004
Musa acuminata, Musa acuminata Harichhal
Morozova, V.V.; Semenova, M.V.; Salanovich, T.N.; Okunev, O.N.; Koshelev, A.V.; Bubnova, T.V.; Krichevskii, G.E.; Timatkov, A.G.; Barysheva, N.V.; Sinitsyn, A.P.
Application of neutral-alkaline pectate lyases to cotton fabric boil off
Appl. Biochem. Microbiol.
42
603-608
2006
Paenibacillus macerans
-
Kramer-Haimovich, H.; Servi, E.; Katan, T.; Rollins, J.; Okon, Y.; Prusky, D.
Effect of ammonia production by Colletotrichum gloeosporioides on pelB activation, pectate lyase secretion, and fruit pathogenicity
Appl. Environ. Microbiol.
72
1034-1039
2006
Colletotrichum gloeosporioides
Gummadi, S.N.; Kumar, D.S.
Optimization of chemical and physical parameters affecting the activity of pectin lyase and pectate lyase from Debaryomyces nepalensis: a statistical approach
Biochem. Eng. J.
30
130-137
2006
Debaryomyces nepalensis
-
Zhuge, B.; Du, G.C.; Shen, W.; Zhuge, J.; Chen, J.
Efficient secretory expression of an alkaline pectate lyase gene from Bacillus subtilis in E. coli and the purification and characterization of the protein
Biotechnol. Lett.
29
405-410
2007
Bacillus subtilis, Bacillus subtilis WSHB04-02
Liao, C.H.; Fett, W.; Tzean, S.S.; Hoffman, G.
Detection and sequence analysis of an altered pectate lyase gene in Pseudomonas syringae pv. glycinea and related bacteria
Can. J. Microbiol.
52
1051-1059
2006
Pseudomonas syringae
Abbott, D.W.; Boraston, A.B.
A family 2 pectate lyase displays a rare fold and transition metal-assisted beta-elimination
J. Biol. Chem.
282
35328-35336
2007
Yersinia enterocolitica
Dinu, D.; Nechifor, M.T.; Stoian, G.; Costache, M.; Dinischiotu, A.
Enzymes with new biochemical properties in the pectinolytic complex produced by Aspergillus niger MIUG 16
J. Biotechnol.
131
128-137
2007
Aspergillus niger, Aspergillus niger MIUG 16
Niture, S.K.; Kumar, A.R.; Parab, P.B.; Pant, A.
Inactivation of polygalacturonase and pectate lyase produced by pH tolerant fungus Fusarium moniliforme NCIM 1276 in a liquid medium and in the host tissue
Microbiol. Res.
163
51-62
2008
Fusarium verticillioides, Fusarium verticillioides NCIM 1276
Vanholme, B.; Van Thuyne, W.; Vanhouteghem, K.; de Meutter, J.; Cannoot, B.; Gheysen, G.
Molecular characterization and functional importance of pectate lyase secreted by the cyst nematode Heterodera schachtii
Mol. Plant Pathol.
8
267-278
2007
Heterodera schachtii (A3F5B9), Heterodera schachtii (A3F5C0), Heterodera schachtii
Kudla, U.; Milac, A.; Qin, L.; Overmars, H.; Roze, E.; Holterman, M.; Petrescu, A.; Goverse, A.; Bakker, J.; Helder, J.; Smant, G.
Structural and functional characterization of a novel, host penetration-related pectate lyase from the potato cyst nematode Globodera rostochiensis
Mol. Plant Pathol.
8
293-305
2007
Globodera rostochiensis
Palusa, S.G.; Golovkin, M.; Shin, S.B.; Richardson, D.N.; Reddy, A.S.
Organ-specific, developmental, hormonal and stress regulation of expression of putative pectate lyase genes in Arabidopsis
New Phytol.
174
537-550
2007
Arabidopsis thaliana
Zhao, Q.; Yuan, S.; Zhang, Y.; Zhu, H.; Dai, C.; Yang, F.; Han, F.
Expression, purification and characterization of pectate lyase A from Aspergillus nidulans in Escherichia coli
World J. Microbiol. Biotechnol.
23
1057-1064
2007
Aspergillus nidulans
Xiao, Z.; Boyd, J.; Grosse, S.; Beauchemin, M.; Coupe, E.; Lau, P.C.
Mining Xanthomonas and Streptomyces genomes for new pectinase-encoding sequences and their heterologous expression in Escherichia coli
Appl. Microbiol. Biotechnol.
78
973-981
2008
Xanthomonas campestris (Q8P6Z9), Xanthomonas campestris (Q8PCR8), Xanthomonas campestris, Streptomyces coelicolor (Q93J76), Streptomyces coelicolor (Q93RU6)
Zhuge, B.; Du, G.; Shen, W.; Zhuge, J.; Chen, J.
Expression of a Bacillus subtilis pectate lyase gene in Pichia pastoris
Biochem. Eng. J.
40
92-98
2008
Bacillus subtilis (P39116)
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Wang, Y.; Wang, Z.; Du, G.; Hua, Z.; Liu, L.; Li, J.; Chen, J.
Enhancement of alkaline polygalacturonate lyase production in recombinant Pichia pastoris according to the ratio of methanol to cell concentration
Biores. Technol.
100
1343-1349
2009
Bacillus subtilis
Basu, S.; Ghosh, A.; Bera, A.; Saha, M.N.; Chattopadhyay, D.; Chakrabarti, K.
Thermodynamic characterization of a highly thermoactive extracellular pectate lyase from a new isolate Bacillus pumilus DKS1
Biores. Technol.
99
8088-8094
2008
Bacillus pumilus
Kalantzi, S.; Mamma, D.; Christakopoulos, P.; Kekos, D.
Effect of pectate lyase bioscouring on physical, chemical and low-stress mechanical properties of cotton fabrics
Biores. Technol.
99
8185-8192
2008
Bacillus sp. (in: Bacteria)
Gummadi, S.N.; Kumar, D.S.
Batch and fed batch production of pectin lyase and pectate lyase by novel strain Debaryomyces nepalensis in bioreactor
Bioresour. Technol.
99
874-881
2008
Debaryomyces nepalensis
Creze, C.; Castang, S.; Derivery, E.; Haser, R.; Hugouvieux-Cotte-Pattat, N.; Shevchik, V.E.; Gouet, P.
The crystal structure of pectate lyase peli from soft rot pathogen Erwinia chrysanthemi in complex with its substrate
J. Biol. Chem.
283
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2008
Dickeya chrysanthemi (O50325), Dickeya chrysanthemi
Santiago-Domenech, N.; Jimenez-Bemudez, S.; Matas, A.J.; Rose, J.K.; Munoz-Blanco, J.; Mercado, J.A.; Quesada, M.A.
Antisense inhibition of a pectate lyase gene supports a role for pectin depolymerization in strawberry fruit softening
J. Exp. Bot.
59
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2008
Fragaria x ananassa
Basu, S.; Saha, M.N.; Chattopadhyay, D.; Chakrabarti, K.
Large-scale degumming of ramie fibre using a newly isolated Bacillus pumilus DKS1 with high pectate lyase activity
J. Ind. Microbiol. Biotechnol.
36
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Bacillus pumilus
Yang, S.; Peng, Q.; Zhang, Q.; Yi, X.; Choi, C.J.; Reedy, R.M.; Charkowski, A.O.; Yang, C.
Dynamic regulation of GacA in type III secretion, pectinase gene expression, pellicle formation, and pathogenicity of Dickeya dadantii (Erwinia chrysanthemi 3937)
Mol. Plant Microbe Interact.
21
133-142
2008
Dickeya dadantii
Miyara, I.; Shafran, H.; Kramer Haimovich, H.; Rollins, J.; Sherman, A.; Prusky, D.
Multi-factor regulation of pectate lyase secretion by Colletotrichum gloeosporioides pathogenic on avocado fruits
Mol. Plant Pathol.
9
281-291
2008
Colletotrichum gloeosporioides
Chotigeat, W.; Duangchu, S.; Wititsuwannakun, R.; Phongdara, A.
Cloning and characterization of pectate lyase from Hevea brasiliensis
Plant Physiol. Biochem.
47
243-247
2008
Hevea brasiliensis (B3SXR0), Hevea brasiliensis
Goulao, L.F.; Cosgrove, D.J.; Oliveira, C.M.
Cloning, characterisation and expression analyses of cDNA clones encoding cell wall-modifying enzymes isolated from ripe apples
Postharvest Biol. Technol.
48
37-51
2008
Malus domestica
-
Figueroa, C.R.; Pimentel, P.; Gaete-Eastman, C.; Moya, M.; Herrera, R.; Caligari, P.D.; Moya-Leon, M.A.
Softening rate of the Chilean strawberry (Fragaria chiloensis) fruit reflects the expression of polygalacturonase and pectate lyase genes
Postharvest Biol. Technol.
49
210-220
2008
Fragaria chiloensis
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Schlosser, J.; Olsson, N.; Weis, M.; Reid, K.; Peng, F.; Lund, S.; Bowen, P.
Cellular expansion and gene expression in the developing grape (Vitis vinifera L.)
Protoplasma
232
255-265
2008
Vitis vinifera (Q9M505), Vitis vinifera
Garcia-Gago, J.; Lopez-Aranda, J.; Munoz-Blanco, J.; Toro, F.; Quesada, M.; Pliego-Alfaro, F.; Mercado, J.
Postharvest behaviour of transgenic strawberry with polygalacturonase or pectate lyase genes silenced
Acta Hortic.
842
573-576
2009
Fragaria x ananassa
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Seyedarabi, A.; To, T.T.; Ali, S.; Hussain, S.; Fries, M.; Madsen, R.; Clausen, M.H.; Teixteira, S.; Brocklehurst, K.; Pickersgill, R.W.
Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase
Biochemistry
49
539-546
2010
Bacillus subtilis (P39116), Bacillus subtilis
Yadav, P.K.; Singh, V.K.; Yadav, S.; Yadav, K.D.; Yadav, D.
In silico analysis of pectin lyase and pectinase sequences
Biochemistry
74
1049-1055
2009
Aspergillus oryzae, Aspergillus clavatus (A1C4B8), Aspergillus fischeri (A1D5E3), Penicillium citrinum (A2I7W3), Aspergillus niger (A2QV36), Bacillus subtilis (A4GRK6), Pectobacterium carotovorum (Q04086), Aspergillus fumigatus (Q4WIT0), Dickeya chrysanthemi (Q59419), Aspergillus nidulans (Q5ATC7)
Sukhumsiirchart, W.; Kawanishi, S.; Deesukon, W.; Chansiri, K.; Kawasaki, H.; Sakamoto, T.
Purification, characterization, and overexpression of thermophilic pectate lyase of Bacillus sp. RN1 isolated from a hot spring in Thailand
Biosci. Biotechnol. Biochem.
73
268-273
2009
Bacillus sp. (in: Bacteria) (B1B6T1), Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) RN1 (B1B6T1)
Tonouchi, A.; Hara, Y.; Umehara, R.; Sanuki, T.; Fukusawa, T.; Miyairi, K.
Cloning of the gene encoding an endo-acting pectate lyase from Streptomyces thermocarboxydus
Biosci. Biotechnol. Biochem.
74
433-436
2010
Streptomyces thermocarboxydus (C6L867), Streptomyces thermocarboxydus, Streptomyces thermocarboxydus B1 (C6L867)
Sesmero, R.; Mitchell, J.; Mercado, J.; Quesada, M.
Rheological characterisation of juices obtained from transgenic pectate lyase-silenced strawberry fruits
Food Chem.
116
426-432
2009
Fragaria x ananassa
Manzocco, L.; Dri, A.; Quarta, B.
Inactivation of pectic lyases by light exposure in model systems and fresh-cut apple
Innov. Food Sci. Emerg. Technol.
10
500-505
2009
Malus sp.
Hsiao, Y.M.; Fang, M.C.; Sun, P.F.; Tseng, Y.H.
Clp and RpfF up-regulate transcription of pelA1 gene encoding the major pectate lyase in Xanthomonas campestris pv. campestris
J. Agric. Food Chem.
57
6207-6215
2009
Xanthomonas campestris pv. campestris
Li, G.; Rao, L.; Xue, Y.; Zhou, C.; Zhang, Y.; Ma, Y.
Cloning, expression, and characterization of a highly active alkaline pectate lyase from alkaliphilic Bacillus sp. N16-5
J. Microbiol. Biotechnol.
20
670-677
2010
Bacillus sp. (in: Bacteria) (D0VP31), Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) N16-5 (D0VP31)
Jia, Y.; Feng, B.; Sun, W.; Zhang, X.
Polygalacturonase, pectate lyase and pectin methylesterase activity in pathogenic strains of Phytophthora capsici incubated under different conditions
J. Phytopathol.
157
585-591
2009
Phytophthora capsici
Basu, S.; Saha, M.N.; Chattopadhyay, D.; Chakrabarti, K.
Degumming and characterization of ramie fibre using pectate lyase from immobilized Bacillus pumilus DKS1
Lett. Appl. Microbiol.
48
593-597
2009
Bacillus pumilus, Bacillus pumilus DKS1
Wang, H.; Guo, Y.; Lv, F.; Zhu, H.; Wu, S.; Jiang, Y.; Li, F.; Zhou, B.; Guo, W.; Zhang, T.
The essential role of GhPEL gene, encoding a pectate lyase, in cell wall loosening by depolymerization of the de-esterified pectin during fiber elongation in cotton
Plant Mol. Biol.
72
397-406
2010
Gossypium hirsutum (Q4JLV6), Gossypium hirsutum
Youssef, S.; Jimnez-Bermudez, S.; Bellido, M.; Martin-Pizarro, C.; Barcelo, M.; Abdal-Aziz, S.; Caballero, J.; Lopez-Aranda, J.; Pliego-Alfaro, F.; Munoz, J.; Quesada, M.; Mercado, J.
Fruit yield and quality of strawberry plants transformed with a fruit specific strawberry pectate lyase gene
Sci. Hortic.
119
120-125
2009
Fragaria x ananassa
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Li, P.; Jing, Q.; Shao, W.
Expression, purification and characterization of a thermostable pectate lyase from Thermotoga maritima
Sheng Wu Gong Cheng Xue Bao
25
223-229
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Thermotoga maritima, Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589
Payasi, A.; Sanwal, R.; Sanwal, G.
Microbial pectate lyases: Characterization and enzymological properties
World J. Microbiol. Biotechnol.
25
1-14
2009
Pseudonocardia sp., Alkalihalobacillus alcalophilus, Bacillus subtilis, Bacillus licheniformis, Bacillus pumilus, Bacillus sp. (in: Bacteria), Dickeya chrysanthemi, Dickeya chrysanthemi (P04959), Dickeya chrysanthemi (P0C1A2), Dickeya chrysanthemi (P11073), Dickeya chrysanthemi (P18209), Fusarium verticillioides, Fusarium solani, Cellvibrio japonicus, Pseudomonas fluorescens, Pseudomonas marginalis, Pseudomonas viridiflava, Thermobifida fusca, Clostridium cellulovorans, Niveispirillum irakense, Bacillus subtilis 168, Bacillus subtilis SO113, Bacillus sp. (in: Bacteria) TS 47, Bacillus pumilus BK2, Bacillus sp. (in: Bacteria) KSM-P15, Bacillus sp. (in: Bacteria) P4-N
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Wijenthiran, K.; Boyce, A.; Chandran, S.
Biochemical and molecular characterisation of pectate lyase in ripening Nangka (AAB) bananas
Acta Hortic.
875
329-340
2010
Musa acuminata, Musa acuminata Nangka
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Ko, C.; Tsai, C.; Tu, J.; Tang, S.; Liu, C.
Expression and thermostability of Paenibacillus campinasensis BL11 pectate lyase and its applications in bast fibre processing
Ann. Appl. Biol.
158
218-225
2011
Paenibacillus campinasensis (D8WN00), Paenibacillus campinasensis BL11 (D8WN00)
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Ouattara, H.G.; Reverchon, S.; Niamke, S.L.; Nasser, W.
Biochemical properties of pectate lyases produced by three different Bacillus strains isolated from fermenting cocoa beans and characterization of their cloned genes
Appl. Environ. Microbiol.
76
5214-5220
2010
Lysinibacillus fusiformis (D8X179), Lysinibacillus fusiformis, Bacillus subtilis (D8X180), Bacillus pumilus (D8X181), Bacillus subtilis BS66 (D8X180), Bacillus subtilis BS66, Bacillus pumilus BS22 (D8X181), Bacillus pumilus BS22
Boland, W.E.; Henriksen, E.D.; Doran-Peterson, J.
Characterization of two Paenibacillus amylolyticus strain 27C64 pectate lyases with activity on highly methylated pectin
Appl. Environ. Microbiol.
76
6006-6009
2010
Paenibacillus amylolyticus (D3JTC1), Paenibacillus amylolyticus (D3JTC2), Paenibacillus amylolyticus, Paenibacillus amylolyticus 27C64 (D3JTC1), Paenibacillus amylolyticus 27C64 (D3JTC2), Paenibacillus amylolyticus 27C64
Yamazaki, A.; Li, J.; Hutchins, W.C.; Wang, L.; Ma, J.; Ibekwe, A.M.; Yang, C.H.
Commensal effect of pectate lyases secreted from Dickeya dadantii on proliferation of Escherichia coli O157:H7 EDL933 on lettuce leaves
Appl. Environ. Microbiol.
77
156-162
2011
Dickeya dadantii, Dickeya dadantii 3937
Basu, S.; Roy, A.; Ghosh, A.; Bera, A.; Chattopadhyay, D.; Chakrabarti, K.
Arg235 is an essential catalytic residue of Bacillus pumilus DKS1 pectate lyase to degum ramie fibre
Biodegradation
22
153-161
2011
Bacillus pumilus (B2ZFM0), Bacillus pumilus DKS1 (B2ZFM0), Bacillus pumilus DKS1
Wang, H.; Fu, L.; Zhang, X.
Comparison of expression, purification and characterization of a new pectate lyase from Phytophthora capsici using two different methods
BMC Biotechnol.
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32
2011
Phytophthora capsici (G2XKV7), Phytophthora capsici
Ouattara, H.G.; Reverchon, S.; Niamke, S.L.; Nasser, W.
Molecular identification and pectate lyase production by Bacillus strains involved in cocoa fermentation
Food Microbiol.
28
1-8
2011
Bacillus cereus, Bacillus subtilis, Bacillus pumilus, Lysinibacillus sphaericus, Bacillus thuringiensis, Lysinibacillus fusiformis
Geric Stare, B.; Fouville, D.; ?irca, S.; Gallot, A.; Urek, G.; Grenier, E.
Molecular variability and evolution of the pectate lyase (pel-2) parasitism gene in cyst nematodes parasitizing different solanaceous plants
J. Mol. Evol.
72
169-181
2011
Globodera mexicana, Globodera pallida (C8CMI5), Globodera pallida, Globodera tabacum (C8CML7), Globodera tabacum, Globodera rostochiensis (Q53EK1), Globodera rostochiensis
Ni, L.; Guo, L.; Custers, J.; Zhang, L.
Characterization of calla lily soft rot caused by Pectobacterium carotovorum subsp. carotovorum ZT0505: bacterial growth and pectate lyase activity under different conditions
J. Plant Pathol.
92
421-428
2010
Pectobacterium carotovorum, Pectobacterium carotovorum ZT0505
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Ben-Daniel, B.H.; Bar-Zvi, D.; Tsror Lahkim, L.
Pectate lyase affects pathogenicity in natural isolates of Colletotrichum coccodes and in pelA gene-disrupted and gene-overexpressing mutant lines
Mol. Plant Pathol.
13
187-197
2012
Colletotrichum coccodes
Damak, N.; Hadj-Taieb, N.; Bonnin, E.; Ben Bacha, A.; Gargouri, A.
Purification and biochemical characterization of a novel thermoactive fungal pectate lyase from Penicillium occitanis
Process Biochem.
46
888-893
2011
Penicillium sp. 'occitanis', Penicillium sp. 'occitanis' CT1
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Alahuhta, M.; Chandrayan, P.; Kataeva, I.; Adams, M.W.; Himmel, M.E.; Lunin, V.V.
A 1.5 A resolution X-ray structure of the catalytic module of Caldicellulosiruptor bescii family 3 pectate lyase
Acta Crystallogr. Sect. F
67
1498-1500
2011
Caldicellulosiruptor bescii (B9MKT4), Caldicellulosiruptor bescii
Yuan, P.; Meng, K.; Wang, Y.; Luo, H.; Shi, P.; Huang, H.; Tu, T.; Yang, P.; Yao, B.
A low-temperature-active alkaline pectate lyase from Xanthomonas campestris ACCC 10048 with high activity over a wide pH range
Appl. Biochem. Biotechnol.
168
1489-1500
2012
Xanthomonas campestris, Xanthomonas campestris ACCC 10048
Zheng, Y.; Huang, C.H.; Liu, W.; Ko, T.P.; Xue, Y.; Zhou, C.; Guo, R.T.; Ma, Y.
Crystal structure and substrate-binding mode of a novel pectate lyase from alkaliphilic Bacillus sp. N16-5
Biochem. Biophys. Res. Commun.
420
269-274
2012
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) N16-5
Mukhopadhyay, A.; Dasgupta, A.K.; Chattopadhyay, D.; Chakrabarti, K.
Improvement of thermostability and activity of pectate lyase in the presence of hydroxyapatite nanoparticles
Biores. Technol.
116
348-354
2012
Priestia megaterium, Priestia megaterium AK2
Liu, Y.; Chen, G.; Wang, J.; Hao, Y.; Li, M.; Li, Y.; Hu, B.; Lu, F.
Efficient expression of an alkaline pectate lyase gene from Bacillus subtilis and the characterization of the recombinant protein
Biotechnol. Lett.
34
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2012
Bacillus subtilis, Bacillus subtilis TCCC11286
Zhang, C.; Yao, J.; Zhou, C.; Mao, L.; Zhang, G.; Ma, Y.
The alkaline pectate lyase PEL168 of Bacillus subtilis heterologously expressed in Pichia pastoris is more stable and efficient for degumming ramie fiber
BMC Biotechnol.
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26
2013
Bacillus subtilis (P39116), Bacillus subtilis, Bacillus subtilis 168 (P39116)
Li, X.; Wang, H.; Zhou, C.; Ma, Y.; Li, J.; Song, J.
Cloning, expression and characterization of a pectate lyase from Paenibacillus sp. 0602 in recombinant Escherichia coli
BMC Biotechnol.
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2014
Paenibacillus sp. (W8CR80)
Hassan, S.; Shevchik, V.E.; Robert, X.; Hugouvieux-Cotte-Pattat, N.
PelN is a new pectate lyase of Dickeya dadantii with unusual characteristics
J. Bacteriol.
195
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2013
Dickeya dadantii
Yuan, P.; Meng, K.; Shi, P.; Luo, H.; Huang, H.; Tu, T.; Yang, P.; Yao, B.
An alkaline-active and alkali-stable pectate lyase from Streptomyces sp. S27 with potential in textile industry
J. Ind. Microbiol. Biotechnol.
39
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2012
Streptomyces sp.
Cnossen-Fassoni, A.; Bazzolli, D.M.; Brommonschenkel, S.H.; Fernandes de Araujo, E.; de Queiroz, M.V.
The pectate lyase encoded by the pecCl1 gene is an important determinant for the aggressiveness of Colletotrichum lindemuthianum
J. Microbiol.
51
461-470
2013
Colletotrichum lindemuthianum (J9R912), Colletotrichum lindemuthianum
Wang, H.; Li, X.; Ma, Y.; Song, J.
Characterization and high-level expression of a metagenome-derived alkaline pectate lyase in recombinant Escherichia coli
Process Biochem.
49
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uncultured bacterium (S5UBI8)
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Alahuhta, M.; Taylor, L.E.; Brunecky, R.; Sammond, D.W.; Michener, W.; Adams, M.W.; Himmel, M.E.; Bomble, Y.J.; Lunin, V.
The catalytic mechanism and unique low pH optimum of Caldicellulosiruptor bescii family 3 pectate lyase
Acta Crystallogr. Sect. D
71
1946-1954
2015
Caldicellulosiruptor bescii (B9MKT4), Caldicellulosiruptor bescii, Caldicellulosiruptor bescii DSM 6725 (B9MKT4)
Zhou, C.; Ye, J.; Xue, Y.; Ma, Y.
Directed evolution and structural analysis of alkaline pectate lyase from the alkaliphilic bacterium Bacillus sp. strain N16-5 to improve its thermostability for efficient ramie degumming
Appl. Environ. Microbiol.
81
5714-5723
2015
Bacillus sp. N16-5 (D0VP31)
Zhou, Z.; Liu, Y.; Chang, Z.; Wang, H.; Leier, A.; Marquez-Lago, T.T.; Ma, Y.; Li, J.; Song, J.
Structure-based engineering of a pectate lyase with improved specific activity for ramie degumming
Appl. Microbiol. Biotechnol.
101
2919-2929
2017
Paenibacillus sp. 0602 (W8CR80)
Liang, C.; Gui, X.; Zhou, C.; Xue, Y.; Ma, Y.; Tang, S.Y.
Improving the thermoactivity and thermostability of pectate lyase from Bacillus pumilus for ramie degumming
Appl. Microbiol. Biotechnol.
99
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2015
Bacillus pumilus (EDW21517), Bacillus pumilus, Bacillus pumilus ATCC 7061 (EDW21517)
Shi, A.; Hu, H.; Zheng, F.; Long, L.; Ding, S.
Biochemical characteristics of an alkaline pectate lyase PelA from Volvariella volvacea roles of the highly conserved N-glycosylation site in its secretion and activity
Appl. Microbiol. Biotechnol.
99
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2015
Volvariella volvacea (A0A097PUC5), Volvariella volvacea
Wang, X.; Lu, Z.; Xu, T.; Selvaraj, J.; Yi, L.; Zhang, G.
Improving the specific activity and thermo-stability of alkaline pectate lyase from Bacillus subtilis 168 for bioscouring
Biochem. Eng. J.
129
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2018
Bacillus subtilis (P39116), Bacillus subtilis 168 (P39116)
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Pose, S.; Kirby, A.R.; Paniagua, C.; Waldron, K.W.; Morris, V.J.; Quesada, M.A.; Mercado, J.A.
The nanostructural characterization of strawberry pectins in pectate lyase or polygalacturonase silenced fruits elucidates their role in softening
Carbohydr. Polym.
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2015
Fragaria x ananassa
Sasaki, M.; Koide, O.; Kobayashi, T.; Usami, R.; Horikoshi, K.
A pectate lyase from a deep subseafloor Georgenia muralis with unusual molecular characteristics
Extremophiles
19
119-125
2015
Georgenia muralis, Georgenia muralis JAM 3H7-3
Ali, S.; Sondergaard, C.R.; Teixeira, S.; Pickersgill, R.W.
Structural insights into the loss of catalytic competence in pectate lyase activity at low pH
FEBS Lett.
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Bacillus subtilis (P39116), Bacillus subtilis 168 (P39116)
Kamijo, J.; Sakai, K.; Suzuki, H.; Suzuki, K.; Kunitake, E.; Shimizu, M.; Kato, M.
Identification and characterization of a thermostable pectate lyase from Aspergillus luchuensis var. saitoi
Food Chem.
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Aspergillus luchuensis var. saitoi, Aspergillus luchuensis var. saitoi KBN 2022
Bai, Y.; Wu, D.; Liu, F.; Li, Y.; Chen, P.; Lu, M.; Zheng, B.
Characterization and functional analysis of the poplar pectate lyase-like gene PtPL1-18 reveal its role in the development of vascular tissues
Front. Plant Sci.
8
1123
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Populus trichocarpa
Yang, Y.; Zhang, Y.; Li, B.; Yang, X.; Dong, Y.; Qiu, D.
A Verticillium dahliae pectate lyase induces plant immune responses and contributes to virulence
Front. Plant Sci.
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1271
2018
Verticillium dahliae (G2X8L4), Verticillium dahliae, Verticillium dahliae Vd991 (G2X8L4)
Su, H.; Qiu, W.; Kong, Q.; Mi, S.; Han, Y.
Thermostable pectate lyase from Caldicellulosiruptor kronotskyensis provides an efficient addition for plant biomass deconstruction
J. Mol. Catal. B
121
104-112
2015
Caldicellulosiruptor kronotskyensis (E4SDD0), Caldicellulosiruptor kronotskyensis DSM 18902 (E4SDD0)
-
Saoudi, B.; Habbeche, A.; Kerouaz, B.; Haberra, S.; Ben Romdhane, Z.; Tichati, L.; Boudelaa, M.; Belghith, H.; Gargouri, A.; Ladjama, A.
Purification and characterization of a new thermoalkaliphilic pectate lyase from Actinomadura keratinilytica Cpt20
Process Biochem.
50
2259-2266
2015
Actinomadura keratinilytica, Actinomadura keratinilytica Cpt20
-
Zhou, C.; Xue, Y.; Ma, Y.
Characterization and overproduction of a thermo-alkaline pectate lyase from alkaliphilic Bacillus licheniformis with potential in ramie degumming
Process Biochem.
54
49-58
2017
Bacillus licheniformis (A0A1B1LZ58)
-
Kumar, S.; Jain, K.K.; Singh, A.; Panda, A.K.; Kuhad, R.C.
Characterization of recombinant pectate lyase refolded from inclusion bodies generated in E. coli BL21(DE3)
Protein Expr. Purif.
110
43-51
2015
Bacillus subtilis (I0BWH3), Bacillus subtilis, Bacillus subtilis RCK (I0BWH3)
Chakraborty, S.; Sharma, K.; Mukherjee, J.; Gupta, M.N.; Goyal, A.
Structural modelling, substrate binding and stability studies of endopectate lyase (PL1B) of family 1 polysaccharide lyase from Clostridium thermocellum
Protein Pept. Lett.
22
557-568
2015
Acetivibrio thermocellus (A3DHF2), Acetivibrio thermocellus, Acetivibrio thermocellus DSM 1237 (A3DHF2)
Zhou, M.; Wu, J.; Wang, T.; Gao, L.; Yin, H.; Lue, X.
The purification and characterization of a novel alkali-stable pectate lyase produced by Bacillus subtilis PB1
World J. Microbiol. Biotechnol.
33
190
2017
Bacillus subtilis (A0A286K338), Bacillus subtilis, Bacillus subtilis PB1 (A0A286K338)
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