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Information on EC 4.2.1.104 - cyanase and Organism(s) Synechococcus sp. and UniProt Accession Q5N0J1

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EC Tree
     4 Lyases
         4.2 Carbon-oxygen lyases
             4.2.1 Hydro-lyases
                4.2.1.104 cyanase
IUBMB Comments
This enzyme, which is found in bacteria and plants, is used to decompose cyanate, which can be used as the sole source of nitrogen [6,7]. Reaction (1a) can be considered an equivalent of 'cyanate + H2O = carbamate', where the water molecule is provided by the dehydration of bicarbonate to carbon dioxide , and hence the enzyme is classified as a hydrolase.
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This record set is specific for:
Synechococcus sp.
UNIPROT: Q5N0J1
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Word Map
The taxonomic range for the selected organisms is: Synechococcus sp.
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Reaction Schemes
+
+
2
=
+
2
+
+
2
=
+
2
Synonyms
cyanase, cyanate hydratase, atcyn, cyanate lyase, oscyn, slr0899, spcyns, cyanate aminohydrolase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
cyanase
cyanate aminohydrolase
-
-
-
-
cyanate C-N-lyase
-
-
-
-
cyanate hydratase
-
-
-
-
cyanate hydrolase
-
-
-
-
cyanate lyase
EC 4.3.99.1
-
formerly
Hydrolase, cyanate
-
-
-
-
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
cyanate + HCO3- + 2 H+ = NH3 + 2 CO2
show the reaction diagram
the enzyme requires bicarbonate as a cofactor. Its mechanism is to catalyse the attack of bicarbonate on cyanate, with elimination of carbon dioxide, thus catalysing hydration of the cyanate to carbamae. The carbamate spontaneously hydrolyses to ammonia and carbon dioxide
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
carbon-nitrogen lyase reaction
-
-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
carbamate hydro-lyase
This enzyme, which is found in bacteria and plants, is used to decompose cyanate, which can be used as the sole source of nitrogen [6,7]. Reaction (1a) can be considered an equivalent of 'cyanate + H2O = carbamate', where the water molecule is provided by the dehydration of bicarbonate to carbon dioxide [2], and hence the enzyme is classified as a hydrolase.
CAS REGISTRY NUMBER
COMMENTARY hide
37289-24-0
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
NCO- + HCO3- + H+
NH3 + CO2
show the reaction diagram
cyanate + HCO3- + 2 H+
NH3 + 2 CO2
show the reaction diagram
NCO- + HCO3-
NH4+ + CO2
show the reaction diagram
-
-
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
NCO- + HCO3- + H+
NH3 + CO2
show the reaction diagram
utilization of exogenous cyanate as a niche source of C and N in cyanobacteria
-
-
?
cyanate + HCO3- + 2 H+
NH3 + 2 CO2
show the reaction diagram
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
NH4+
-
negative regulation, represses enzyme expression
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
bicarbonate
-
-
NtcA
-
transcription factor, global nitrogen regulator of cyanobacteria, required for expression
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.047
-
complemented deficient Escherichia coli cells
0.43
purified recombinant enzyme, pH 7.4, 55°C
0.8
purified recombinant enzyme, pH 7.4, 4°C
5.56
purified recombinant enzyme, pH 7.4, 26°C
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4 - 55
activity range
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
strain UTEX625, also known as Synechococcus sp. strain PCC6301
SwissProt
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
16362
-
x * 16362, amino acid sequence calculation
50000
x * 50000, recombinant MBP-CynS fusion enzyme, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4 - 55
CynS is rapidly inactivated at higher temperatures and only residual activity o f 0.09 U/mg occurs at 50°C
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
recombinant CynS-MBP from Escherichia coli strain HMS174 by amylose affinity chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli
gene cynS, DNA and amino acid sequence determination and analysis, phylogenetic analysis, overexpression in Escherichia coli strain HMS174 as maltose-binding-protein fusion protein
gene cynS, DNA and amino acid sequence determination and analysis, tightly clustered with 2 genes located upstream, which encode proteins similar to the subunits of nitrate-nitrite transporter, complementation of deficient Escherichia coli strain
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
molecular biology
analyses of conditions to metabolize exogenously supplied cyanate, depending on proteins of the operon CynABDS, light and internal pools of HCO3- and CO2
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Harano, Y.; Suzuki, I.; Maeda, S.; Kaneko, T.; Tabata, S.; Omata, T.
Identification and nitrogen regulation of the cyanase gene from the cyanobacteria Synechocystis sp. strain PCC 6803 and Synechococcus sp. strain PCC 7942
J. Bacteriol.
179
5744-5750
1997
Synechococcus sp., Synechocystis sp.
Manually annotated by BRENDA team
Espie, G.S.; Jalali, F.; Tong, T.; Zacal, N.J.; So, A.K.
Involvement of the cynABDS operon and the CO2-concentrating mechanism in the light-dependent transport and metabolism of cyanate by cyanobacteria
J. Bacteriol.
189
1013-1024
2007
Synechococcus elongatus, Synechococcus elongatus (Q59948), Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC 7942 (Q59948), Synechococcus sp., Synechococcus sp. (Q5N0J1), Synechococcus sp. UTEX625, Synechocystis sp. (Q55367)
Manually annotated by BRENDA team
Kamennaya, N.A.; Post, A.F.
Characterization of cyanate metabolism in marine Synechococcus and Prochlorococcus spp
Appl. Environ. Microbiol.
77
291-301
2011
Prochlorococcus sp. (Q7V2U0), Prochlorococcus sp., Prochlorococcus sp. MED4 (Q7V2U0), Synechococcus sp. (A5GPQ6), Synechococcus sp., Synechococcus sp. WH7803 (A5GPQ6)
Manually annotated by BRENDA team