Reference on EC 4.1.99.3 - deoxyribodipyrimidine photo-lyase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Yasui, A.; Takao, M.; Oikawa, A.; Kiener, A.; Walsh, C.T.; Eker, A.P.M.
Cloning and characterization of a photolyase gene from the cyanobacterium Anacystis nidulans
Nucleic Acids Res.
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4447-4463
1988
Synechococcus elongatus PCC 7942 = FACHB-805
Weinfeld, M.; Paterson, M.C.
DNA cyclobutane pyrimidine dimers with a cleaved internal phosphodiester bond can be photoenzymatically reversed by Escherichia coli PhrB photolyase
Nucleic Acids Res.
16
5693
1988
Escherichia coli
Eker, A.P.M.; Hessels, J.K.C.; van de Velde, J.
Photoreactivating enzyme from the green alga Scenedesmus acutus. Evidence for the presence of two different flavin chromophores
Biochemistry
27
1758-1765
1988
Scenedesmus acutus
-
Husain, I.; Sancar, G.B.; Holbrooks, S.R.; Sancar, A.
Mechanism of damage recognition by Escherichia coli DNA photolyase
J. Biol. Chem.
262
13188-13197
1987
Escherichia coli
Payne, G.; Heelis, P.F.; Rohrs, B.R.; Sancar, A.
The active form of Escherichia coli DNA photolyase contains a fully reduced flavin and not a flavin radical, both in vivo and in vitro
Biochemistry
26
7121-7127
1987
Escherichia coli
Sancar , G.B.; Sancar, A.
Structure and function of DNA photolyases
Trends Biochem. Sci.
12
259-261
1987
Saccharomyces cerevisiae, Escherichia coli, Streptomyces griseus
-
Sutherland, B.M.; Oliveira, O.M.; Ciarrocchi, G.; Brash, D.E.; Haseltine, W.A.; Lewis, R.J.; Hanawalt, P.C.
Substrate range of the 40,000-dalton DNA-photoreactivating enzyme from Escherichia coli
Biochemistry
25
681-687
1986
Escherichia coli
Koka, P.
Stimulation of Escherichia coli DNA photoreactivating enzyme activity by adenosine 5' triphosphate
Biochemistry
23
2914-2922
1984
Escherichia coli
Sancar, A.; Smith, F.W.; Sancar, G.B.
Purification of Escherichia coli DNA photolyase
J. Biol. Chem.
259
6028-6032
1984
Escherichia coli
Sancar, A.; Sancar, G.B.
Escherichia coli DNA photolyase is a flavoprotein
J. Mol. Biol.
172
223-227
1984
Escherichia coli
Sutherland, B.M.
Photoreactivating enzymes
The Enzymes, 3rd Ed. (Boyer, P. D. , ed. )
14
481-505
1981
Synechococcus elongatus PCC 7942 = FACHB-805, Saccharomyces cerevisiae, Caluromys derbianus, Didelphis marsupialis, Escherichia coli, Homo sapiens, Potorous tridactylus, Streptomyces griseus
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Eker, A.P.M.; Dekker, R.H.; Berends, W.
Photoreactivating enzyme from Streptomyces griseus-IV. On the nature of the chromophoric cofactor in Streptomyces griseus photoreactivating enzyme
Photochem. Photobiol.
33
65-72
1981
Streptomyces griseus
Muraoka, N.; Okuda, A.; Ikenaga, M.
DNA photoreactivating enzyme from silkworm
Photochem. Photobiol.
32
193-197
1980
Bombyx mori
-
Snapka, R.M.; Sutherland, B.M.
Escherichia coli photoreactivating enzyme: purification and properties
Biochemistry
19
4201-4208
1980
Escherichia coli
Iwatsuki, N.; Joe, C.O.; Werbin, H.
Evidence that deoxyribonucleic acid photolyase from baker s yeast is a flavoprotein
Biochemistry
19
1172-1176
1980
Saccharomyces cerevisiae
Herrioti, R.M.
Purification of the photoreactivating enzyme from yeast
Anal. Biochem.
95
77-81
1979
Saccharomyces cerevisiae
Werbin, H.
DNA photolyase
Photochem. Photobiol.
26
675-678
1977
Saccharomyces cerevisiae, Guarianthe aurantiaca, Datura stramonium, Escherichia coli, Euglena gracilis, Frog, Homo sapiens, Phaseolus vulgaris, Zea mays
Werbin, H.; Madden, J.J.
The subunit structure of yeast DNA photolyase and the purification of a fluorescent activator of the enzyme
Photochem. Photobiol.
25
421-427
1977
Saccharomyces cerevisiae
Snapka, R.M.; Fuselier, C.O.
Photoreactivating enzyme from Escherichia coli
Photochem. Photobiol.
25
415-420
1977
Guarianthe aurantiaca, Escherichia coli
Boatwright, D.T.; Madden, J.J.; Denson, J.; Werbin, H.
Yeast DNA photolyase: molecular weight, subunit structure, and reconstruction of active enzyme from its subunits
Biochemistry
14
5418-5421
1975
Saccharomyces cerevisiae, Escherichia coli
Eker, A.P.M.; Fichtinger-Schepman, A.M.J.
Studies on a DNA photoreactivating enzyme from Streptomyces griseus. II. Purification of the enzyme
Biochim. Biophys. Acta
378
54-63
1975
Streptomyces griseus
Sutherland, B.M.; Runge, P.; Sutherland, J.C.
DNA photoreactivating enzyme from placental mammals. Origin and characteristics
Biochemistry
13
4710-4715
1974
Homo sapiens, Mus musculus
Sutherland, B.M.
Photoreactivating enzyme from human leukocytes
Nature
248
109-112
1974
Homo sapiens
Setlow, J.K.; Bollum, F.J.
The minimum size of the substrate for yeast photoreactivating enzyme
Biochim. Biophys. Acta
157
233-237
1968
Saccharomyces cerevisiae
Kim, S.T.; Malhotra, K.; Ryo, H.; Sancar, A.; Todo, T.
Purification and characterization of Drosophila melanogaster photolyase
Mutat. Res.
363
97-104
1996
Drosophila melanogaster
Heelis, P.F.; Sancar, A.
Photochemical properties of Escherichia coli DNA photolyase: a flash photolysis study
Biochemistry
25
8163-8166
1986
Escherichia coli
Livingstone-Zatchej, M.; Meier, A.; Suter, B.; Thoma, F.
RNA polymerase II transcription inhibits DNA repair by photolyase in the transcribed strand of active yeast genes
Nucleic Acids Res.
25
3795-3800
1997
Saccharomyces cerevisiae
Hejmadi, V.S.; Verma, N.C.
Presence of RNA from yeast inhibits the photoreactivation of UV-irradiated DNA by Phr A photolyase from Escherichia coli
Indian J. Exp. Biol.
30
756-758
1992
Escherichia coli
Eker, A.P.M.; Yajima, H.; Yasui, A.
DNA photolyase from the fungus Neurospora crassa. Purification, characterization and comparison with other photolyases
Photochem. Photobiol.
60
125-133
1994
Neurospora crassa
Park, H.W.; Kim, S.T.; Sancar, A.; Deisenhofer, J.
Crystal structure of DNA photolyase from Escherichia coli [see comments
Science
268
1866-1872
1995
Escherichia coli
Kato, R.; Hasegawa, K.; Hidaka, Y.; Kuramitsu, S.; Hoshino, T.
Characterization of a thermostable DNA photolyase from an extremely thermophilic bacterium, Thermus thermophilus HB27
J. Bacteriol.
179
6499-6503
1997
Thermus thermophilus, Thermus thermophilus HB27 / ATCC BAA-163 / DSM 7039
Kiener, A.; Husain, I.; Sancar, A.; Walsh, C.
Purification and properties of Methanobacterium thermoautotrophicum DNA photolyase
J. Biol. Chem.
264
13880-13887
1989
Methanothermobacter thermautotrophicus
Li, Y.F.; Sancar, A.
Cloning, sequencing, expression and characterization of DNA photolyase from Salmonella typhimurium
Nucleic Acids Res.
19
4885-4890
1991
Salmonella enterica subsp. enterica serovar Typhimurium
Heelis, P.F.; Payne, G.; Sancar, A.
Photochemical properties of Escherichia coli DNA photolyase: selective photodecomposition of the second chromophore
Biochemistry
26
4634-4640
1987
Escherichia coli
Sancar, G.B.
DNA photolyases: physical properties, action mechanism, and roles in dark repair
Mutat. Res.
236
147-160
1990
Synechococcus elongatus PCC 7942 = FACHB-805, Saccharomyces cerevisiae, Escherichia coli, Halobacterium salinarum, Methanothermobacter thermautotrophicus, Scenedesmus acutus, Streptomyces griseus
Tamada, T.; Kitadokoro, K.; Higuchi, Y.; Inaka, K.; Yasui, A.; de Ruiter, P.E.; Eker, A.P.M.; Miki, K.
Crystal structure of DNA photolyase from Anacystis nidulans [letter
Nat. Struct. Biol.
4
887-891
1997
Synechococcus elongatus PCC 7942 = FACHB-805
Malhotra, K.; Kim, S.T.; Sancar, A.
Characterization of a medium wavelength type DNA photolyase: purification and properties of photolyase from Bacillus firmus
Biochemistry
33
8712-8718
1994
Cytobacillus firmus
Heelis, P.F.; Okamura, T.; Sancar, A.
Excited-state properties of Escherichia coli DNA photolyase in the picocosecond to millisecond time scale
Biochemistry
29
5684-5698
1990
Escherichia coli
-
Husain, I.; Sancar, A.
Binding of E. coli DNA photolyase to a defined substrate containing a single T mean value of T dimer
Nucleic Acids Res.
15
1109-1120
1987
Escherichia coli
MacFarlane, A.W.t.; Stanley, R.J.
cis-syn Thymidine dimer repair by DNA photolyase in real time
Biochemistry
42
8558-8568
2003
Synechococcus elongatus PCC 7942 = FACHB-805
Hada, M.; Hino, K.; Buchholz, G.; Goss, J.; Wellmann, E.; Shin, M.
Assay of DNA photolyase activity in spinach leaves in relation to cell compartmentation-evidence for lack of DNA photolyase in chloroplasts
Biosci. Biotechnol. Biochem.
64
1288-1291
2000
Spinacia oleracea
Thoma, F.
Light and dark in chromatin repair: repair of UV-induced DNA lesions by photolyase and nucleotide excision repair
EMBO J.
18
6585-6598
1999
Saccharomyces cerevisiae, Escherichia coli, no activity in mammalia
Schul, W.; Jans, J.; Rijksen, Y.M.; Klemann, K.H.; Eker, A.P.; de Wit, J.; Nikaido, O.; Nakajima, S.; Yasui, A.; Hoeijmakers, J.H.; van der Horst, G.T.
Enhanced repair of cyclobutane pyrimidine dimers and improved UV resistance in photolyase transgenic mice
EMBO J.
21
4719-4729
2002
Potorous tridactylus
Kleiner, O.; Butenandt, J.; Carell, T.; Batschauer, A.
Class II DNA photolyase from Arabidopsis thaliana contains FAD as a cofactor
Eur. J. Biochem.
264
161-167
1999
Arabidopsis thaliana
Hitomi, K.; Nakamura, H.; Kim, S.T.; Mizukoshi, T.; Ishikawa, T.; Iwai, S.; Todo, T.
Role of two histidines in the (6-4) photolyase reaction
J. Biol. Chem.
276
10103-10109
2001
Xenopus laevis
Meier, A.; Livingstone-Zatchej, M.; Thoma, F.
Repair of active and silenced rDNA in yeast: the contributions of photolyase and transcription-couples nucleotide excision repair
J. Biol. Chem.
277
11845-11852
2002
Saccharomyces cerevisiae, Saccharomyces cerevisiae AMY3
Christine, K.S.; MacFarlane, A.W.t.; Yang, K.; Stanley, R.J.
Cyclobutylpyrimidine dimer base flipping by DNA photolyase
J. Biol. Chem.
277
38339-38344
2002
Escherichia coli
Worthington, E.N.; Kavakli, I.H.; Berrocal-Tito, G.; Bondo, B.E.; Sancar, A.
Purification and characterization of three members of the photolyase/cryptochrome family blue-light photoreceptors from Vibrio cholerae
J. Biol. Chem.
278
39143-39154
2003
Vibrio cholerae serotype O1
Waterworth, W.M.; Jiang, Q.; West, C.E.; Nikaido, M.; Bray, C.M.
Characterization of Arabidopsis photolyase enzymes and analysis of their role in protection from ultraviolet-B radiation
J. Exp. Bot.
53
1005-1015
2002
Arabidopsis thaliana (Q9SB00), Arabidopsis thaliana
Suter, B.; Thoma, F.
DNA-repair by photolyase reveals dynamic properties of nucleosome positioning in vivo
J. Mol. Biol.
319
395-406
2002
Saccharomyces cerevisiae, Saccharomyces cerevisiae JMY1
Srinivasan, V.; Schnitzlein, W.M.; Tripathy, D.N.
Fowlpox virus encodes a novel DNA repair enzyme, CPD-photolyase, that restores infectivity of UV light-damaged virus
J. Virol.
75
1681-1688
2001
Fowlpox virus (Q9ICB3), Fowlpox virus
Suter, B.; Wellinger, R.E.; Thoma, F.
DNA repair in a yeast origin of replication: contributions of photolyase and nucleotide excision repair
Nucleic Acids Res.
28
2060-2068
2000
Saccharomyces cerevisiae
Hada, M.; Iida, Y.; Takeuchi, Y.
Action spectra of DNA photolyases for photorepair of cyclobutane pyrimidine dimers in sorghum and cucumber
Plant Cell Physiol.
41
644-648
2000
Cucumis sativus, Sorghum bicolor
Petersen, J.L.; Lang, D.W.; Small, G.D.
Cloning and characterization of a class II DNA photolyase from Chlamydomonas
Plant Mol. Biol.
40
1063-1071
1999
Chlamydomonas reinhardtii (Q9XHE2)
Aubert, C.; Mathis, P.; Eker, A.P.; Brettel, K.
Intraprotein electron transfer between tyrosine and tryptophan in DNA photolyase from Anacystis nidulans
Proc. Natl. Acad. Sci. USA
96
5423-5427
1999
Escherichia coli
Komori, H.; Masui, R.; Kuramitsu, S.; Yokoyama, S.; Shibata, T.; Inoue, Y.; Miki, K.
Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism
Proc. Natl. Acad. Sci. USA
98
13560-13565
2001
Thermus thermophilus (P61497), Thermus thermophilus
Kort, R.; Komori, H.; Adachi, S.; Miki, K.; Eker, A.
DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction
Acta Crystallogr. Sect. D
60
1205-1213
2004
Synechococcus elongatus PCC 7942 = FACHB-805
Nakayama, T.; Todo, T.; Notsu, S.; Nakazono, M.; Zaitsu, K.
Assay method for Escherichia coli photolyase activity using single-strand cis-syn cyclobutane pyrimidine dimer DNA as substrate
Anal. Biochem.
329
263-268
2004
Escherichia coli
Kavakli, I.H.; Sancar, A.
Analysis of the role of intraprotein electron transfer in photoreactivation by DNA photolyase in vivo
Biochemistry
43
15103-15110
2004
Escherichia coli
Henry, A.A.; Jimenez, R.; Hanway, D.; Romesberg, F.E.
Preliminary characterization of light harvesting in E. coli DNA photolyase
ChemBioChem
5
1088-1094
2004
Escherichia coli
Kihara, J.; Moriwaki, A.; Matsuo, N.; Arase, S.; Honda, Y.
Cloning, functional characterization, and near-ultraviolet radiation-enhanced expression of a photolyase gene (PHR1) from the phytopathogenic fungus Bipolaris oryzae
Curr. Genet.
46
37-46
2004
Bipolaris oryzae
Tanida, H.; Tahara, E.; Mochizuki, M.; Yamane, Y.; Ryoji, M.
Purification, cDNA cloning, and expression profiles of the cyclobutane pyrimidine dimer photolyase of Xenopus laevis
FEBS J.
272
6098-6108
2005
Xenopus laevis
Kapetanaki, S.M.; Ramsey, M.; Gindt, Y.M.; Schelvis, J.P.M.
Substrate electric dipole moment exerts a pH-dependent effect on electron transfer in Escherichia coli photolyase
J. Am. Chem. Soc.
126
6214-6215
2004
Escherichia coli
Ueda, T.; Kato, A.; Ogawa, Y.; Torizawa, T.; Kuramitsu, S.; Iwai, S.; Terasawa, H.; Shimada, I.
NMR study of repair mechanism of DNA photolyase by FAD-induced paramagnetic relaxation enhancement
J. Biol. Chem.
279
52574-52579
2004
Thermus thermophilus (P61497), Thermus thermophilus
Ueda, T.; Kato, A.; Kuramitsu, S.; Terasawa, H.; Shimada, I.
Identification and characterization of a second chromophore of DNA photolyase from Thermus thermophilus HB27
J. Biol. Chem.
280
36237-36243
2005
Thermus thermophilus (P61497), Thermus thermophilus, Thermus thermophilus HB27 / ATCC BAA-163 / DSM 7039 (P61497)
Slamovits, C.H.; Keeling, P.J.
Class II photolyase in a microsporidian intracellular parasite
J. Mol. Biol.
341
713-721
2004
Antonospora locustae (Q5UUY8), Antonospora locustae
Yoshihara, R.; Imaki, T.; Hori, M.; Watanabe, C.; Yamamoto, K.; Takimoto, K.
CPD photolyase gene from Spinacia oleracea: repair of UV-damaged DNA and expression in plant organs
J. Radiat. Res.
46
157-164
2005
Spinacia oleracea (Q84JX2), Spinacia oleracea
Teranishi, M.; Iwamatsu, Y.; Hidema, J.; Kumagai, T.
Ultraviolet-B sensitivities in Japanese lowland rice cultivars: cyclobutane pyrimidine dimer photolyase activity and gene mutation
Plant Cell Physiol.
45
1848-1856
2004
Oryza sativa Japonica Group (Q6F6A2), Oryza sativa Japonica Group
Mees, A.; Klar, T.; Gnau, P.; Hennecke, U.; Eker, A.P.; Carell, T.; Essen, L.O.
Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair
Science
306
1789-1793
2004
Synechococcus elongatus PCC 7942 = FACHB-805
Walker, E.L.; Bose, J.L.; Stabb, E.V.
Photolyase confers resistance to UV light but does not contribute to the symbiotic benefit of bioluminescence in Vibrio fischeri ES114
Appl. Environ. Microbiol.
72
6600-6606
2006
Aliivibrio fischeri ES114
Hu, J.; Quek, P.H.
Effects of UV radiation on photolyase and implications with regards to photoreactivation following low- and medium-pressure UV disinfection
Appl. Environ. Microbiol.
74
327-328
2008
Escherichia coli
Yang, K.; Stanley, R.J.
Differential distortion of substrate occurs when it binds to DNA photolyase: a 2-aminopurine study
Biochemistry
45
11239-11245
2006
Escherichia coli
Byrdin, M.; Villette, S.; Eker, A.P.; Brettel, K.
Observation of an intermediate tryptophanyl radical in W306F mutant DNA photolyase from Escherichia coli supports electron hopping along the triple tryptophan chain
Biochemistry
46
10072-10077
2007
Escherichia coli (P00914), Escherichia coli
Zhang, L.W.; Li, M.; Wu, Q.Y.
Influence of ultraviolet-C on structure and function of Synechococcus sp. PCC 7942 photolyase
Biochemistry (Moscow)
72
540-544
2007
Synechococcus elongatus PCC 7942 = FACHB-805
Xu, L.; Zhang, D.; Mu, W.; van Berkel, W.J.; Luo, Z.
Reversible resolution of flavin and pterin cofactors of His-tagged Escherichia coli DNA photolyase
Biochim. Biophys. Acta
1764
1454-1461
2006
Escherichia coli
Miyazawa, Y.; Nishioka, H.; Yura, K.; Yamato, T.
Discrimination of class I CPD photolyase from blue light photoreceptors by single methionine residue
Biophys. J.
94
2194-2203
2008
Synechococcus elongatus PCC 7942 = FACHB-805
Essen, L.O.; Klar, T.
Light-driven DNA repair by photolyases
Cell. Mol. Life Sci.
63
1266-1277
2006
Arabidopsis thaliana, Aspergillus nidulans, Potorous tridactylus, Escherichia coli (P00914)
Klar, T.; Kaiser, G.; Hennecke, U.; Carell, T.; Batschauer, A.; Essen, L.O.
Natural and non-natural antenna chromophores in the DNA photolyase from Thermus thermophilus
Chembiochem
7
1798-1806
2006
Thermus thermophilus (P61497), Thermus thermophilus
Berrocal-Tito, G.M.; Esquivel-Naranjo, E.U.; Horwitz, B.A.; Herrera-Estrella, A.
Trichoderma atroviride PHR1, a fungal photolyase responsible for DNA repair, autoregulates its own photoinduction
Eukaryot. Cell
6
1682-1692
2007
Trichoderma atroviride
Fujihashi, M.; Numoto, N.; Kobayashi, Y.; Mizushima, A.; Tsujimura, M.; Nakamura, A.; Kawarabayasi, Y.; Miki, K.
Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: implication of a novel light-harvesting cofactor
J. Mol. Biol.
365
903-910
2007
Sulfurisphaera tokodaii
Cheng, L.; Qiao, D.R.; Lu, X.Y.; Xiong, Y.; Bai, L.H.; Xu, H.; Yang, Y.; Cao, Y.
Identification and expression of the gene product encoding a CPD photolyase from Dunaliella salina
J. Photochem. Photobiol. B, Biol.
87
137-143
2007
Dunaliella salina (A0T3C8), Dunaliella salina
Lukacs, A.; Eker, A.P.; Byrdin, M.; Villette, S.; Pan, J.; Brettel, K.; Vos, M.H.
Role of the middle residue in the triple tryptophan electron transfer chain of DNA photolyase: ultrafast spectroscopy of a Trp-->Phe mutant
J. Phys. Chem. B
110
15654-15658
2006
Escherichia coli (P00914), Escherichia coli
Yang, K.; Matsika, S.; Stanley, R.J.
6MAP, a fluorescent adenine analogue, is a probe of base flipping by DNA photolyase
J. Phys. Chem. B
111
10615-10625
2007
Escherichia coli
Takeuchi, Y.; Inoue, T.; Takemura, K.; Hada, M.; Takahashi, S.; Ioki, M.; Nakajima, N.; Kondo, N.
Induction and inhibition of cyclobutane pyrimidine dimer photolyase in etiolated cucumber (Cucumis sativus) cotyledons after ultraviolet irradiation depends on wavelength
J. Plant Res.
120
365-374
2007
Cucumis sativus
Sancar, G.B.; Sancar, A.
Purification and characterization of DNA photolyases
Methods Enzymol.
408
121-156
2006
Aspergillus nidulans, Saccharomyces cerevisiae, Escherichia coli
Hendrischk, A.K.; Braatsch, S.; Glaeser, J.; Klug, G.
The phrA gene of Rhodobacter sphaeroides encodes a photolyase and is regulated by singlet oxygen and peroxide in a sigma(E)-dependent manner
Microbiology
153
1842-1851
2007
Cereibacter sphaeroides
Hidema, J.; Taguchi, T.; Ono, T.; Teranishi, M.; Yamamoto, K.; Kumagai, T.
Increase in CPD photolyase activity functions effectively to prevent growth inhibition caused by UVB radiation
Plant J.
50
70-79
2007
Oryza sativa
Selby, C.P.; Sancar, A.
A cryptochrome/photolyase class of enzymes with single-stranded DNA-specific photolyase activity
Proc. Natl. Acad. Sci. USA
103
17696-17700
2006
Arabidopsis thaliana, Bacillus subtilis, Vibrio cholerae serotype O1, Xenopus laevis
Prytkova, T.R.; Beratan, D.N.; Skourtis, S.S.
Photoselected electron transfer pathways in DNA photolyase
Proc. Natl. Acad. Sci. USA
104
802-807
2007
Escherichia coli
Oztuerk, N.; Kao, Y.T.; Selby, C.P.; Kavakli, I.H.; Partch, C.L.; Zhong, D.; Sancar, A.
Purification and characterization of a type III photolyase from Caulobacter crescentus
Biochemistry
47
10255-10261
2008
Caulobacter vibrioides, Caulobacter vibrioides CB15
Xu, L.; Mu, W.; Ding, Y.; Luo, Z.; Han, Q.; Bi, F.; Wang, Y.; Song, Q.
Active site of Escherichia coli DNA photolyase: Asn378 is crucial both for stabilizing the neutral flavin radical cofactor and for DNA repair
Biochemistry
47
8736-8743
2008
Escherichia coli
Masson, F.; Laino, T.; Rothlisberger, U.; Hutter, J.
A QM/MM investigation of thymine dimer radical anion splitting catalyzed by DNA photolyase
Chemphyschem
10
400-410
2009
Synechococcus elongatus PCC 7942 = FACHB-805
Moriwaki, A.; Katsube, H.; Ueno, M.; Arase, S.; Kihara, J.
Cloning and characterization of the BLR2, the homologue of the blue-light regulator of Neurospora crassa WC-2, in the phytopathogenic fungus Bipolaris oryzae
Curr. Microbiol.
56
115-121
2008
Bipolaris oryzae, Bipolaris oryzae D9/F6-69
van Oers, M.M.; Lampen, M.H.; Bajek, M.I.; Vlak, J.M.; Eker, A.P.
Active DNA photolyase encoded by a baculovirus from the insect Chrysodeixis chalcites
DNA Repair
7
1309-1318
2008
Chrysodeixis chalcites nucleopolyhedrovirus
de Lima-Bessa, K.M.; Armelini, M.G.; Chigancas, V.; Jacysyn, J.F.; Amarante-Mendes, G.P.; Sarasin, A.; Menck, C.F.
CPDs and 6-4PPs play different roles in UV-induced cell death in normal and NER-deficient human cells
DNA Repair
7
303-312
2008
Potorous tridactylus
Goosen, N.; Moolenaar, G.F.
Repair of UV damage in bacteria
DNA Repair
7
353-379
2008
Synechococcus elongatus PCC 7942 = FACHB-805, Escherichia coli, Thermus thermophilus, no activity in Prochlorococcus marinus
Lettieri, T.; Kraehenbuehl, R.; Capiaghi, C.; Livingstone-Zatchej, M.; Thoma, F.
Functionally distinct nucleosome-free regions in yeast require Rad7 and Rad16 for nucleotide excision repair
DNA Repair
7
734-743
2008
Saccharomyces cerevisiae
Veluchamy, S.; Rollins, J.A.
A CRY-DASH-type photolyase/cryptochrome from Sclerotinia sclerotiorum mediates minor UV-A-specific effects on development
Fungal Genet. Biol.
45
1265-1276
2008
Sclerotinia sclerotiorum (A7F2C9), Sclerotinia sclerotiorum
Bluhm, B.H.; Dunkle, L.D.
PHL1 of Cercospora zeae-maydis encodes a member of the photolyase/cryptochrome family involved in UV protection and fungal development
Fungal Genet. Biol.
45
1364-1372
2008
Cercospora zeae-maydis (B3VTS7), Cercospora zeae-maydis SCOH1-5 (B3VTS7)
Lukacs, A.; Eker, A.P.; Byrdin, M.; Brettel, K.; Vos, M.H.
Electron hopping through the 15 A triple tryptophan molecular wire in DNA photolyase occurs within 30 ps
J. Am. Chem. Soc.
130
14394-14395
2008
Escherichia coli
Kao, Y.T.; Tan, C.; Song, S.H.; Oztuerk, N.; Li, J.; Wang, L.; Sancar, A.; Zhong, D.
Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase
J. Am. Chem. Soc.
130
7695-7701
2008
Escherichia coli
Balland, V.; Byrdin, M.; Eker, A.P.; Ahmad, M.; Brettel, K.
What makes the difference between a cryptochrome and DNA photolyase? A spectroelectrochemical comparison of the flavin redox transitions
J. Am. Chem. Soc.
131
426-427
2009
Synechococcus elongatus PCC 7942 = FACHB-805, Escherichia coli
Sancar, A.
Structure and function of photolyase and in vivo enzymology: 50th Anniversary
J. Biol. Chem.
283
32153-32157
2008
Escherichia coli, Streptomyces griseus, no acitivity in Haemophilus influenzae
Murphy, A.K.; Tammaro, M.; Cortazar, F.; Gindt, Y.M.; Schelvis, J.P.
Effect of the cyclobutane cytidine dimer on the properties of Escherichia coli DNA photolyase
J. Phys. Chem. B
112
15217-15226
2008
Escherichia coli, Escherichia coli pMS969
Byrdin, M.; Villette, S.; Espagne, A.; Eker, A.P.; Brettel, K.
Polarized transient absorption to resolve electron transfer between tryptophans in DNA photolyase
J. Phys. Chem. B
112
6866-6871
2008
Escherichia coli (P00914)
Zheng, X.; Garcia, J.; Stuchebrukhov, A.A.
Theoretical study of excitation energy transfer in DNA photolyase
J. Phys. Chem. B
112
8724-8729
2008
Synechococcus elongatus PCC 7942 = FACHB-805
Yamamoto, A.; Tanbir, N.; Hirouchi, T.; Teranishi, M.; Hidema, J.; Morioka, H.; Yamamoto, K.
Temperature-sensitive photoreactivation of cyclobutane thymine dimer in soybean
J. Radiat. Res.
49
189-196
2008
Glycine max (B1B538), Glycine max
Bayram, O.; Biesemann, C.; Krappmann, S.; Galland, P.; Braus, G.H.
More than a repair enzyme: Aspergillus nidulans photolyase-like CryA is a regulator of sexual development
Mol. Biol. Cell
19
3254-3262
2008
Aspergillus nidulans
Yang, K.; Stanley, R.J.
The extent of DNA deformation in DNA photolyase-substrate complexes: a solution state fluorescence study
Photochem. Photobiol.
84
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2008
Escherichia coli
Iwamatsu, Y.; Aoki, C.; Takahashi, M.; Teranishi, M.; Ding, Y.; Sun, C.; Kumagai, T.; Hidema, J.
UVB sensitivity and cyclobutane pyrimidine dimer (CPD) photolyase genotypes in cultivated and wild rice species
Photochem. Photobiol. Sci.
7
311-320
2008
Oryza barthii, Oryza glaberrima, Oryza rufipogon, Oryza meridionalis, Oryza sativa Japonica Group (Q6F6A2), Oryza glaberrima C7366
Teranishi, M.; Nakamura, K.; Morioka, H.; Yamamoto, K.; Hidema, J.
The native cyclobutane pyrimidine dimer photolyase of rice is phosphorylated
Plant Physiol.
146
1941-1951
2008
Oryza sativa Japonica Group (Q6F6A2)
Kunz, B.A.; Dando, P.K.; Grice, D.M.; Mohr, P.G.; Schenk, P.M.; Cahill, D.M.
UV-induced DNA damage promotes resistance to the biotrophic pathogen Hyaloperonospora parasitica in Arabidopsis
Plant Physiol.
148
1021-1031
2008
Arabidopsis thaliana
Ioki, M.; Takahashi, S.; Nakajima, N.; Fujikura, K.; Tamaoki, M.; Saji, H.; Kubo, A.; Aono, M.; Kanna, M.; Ogawa, D.; Fukazawa, J.; Oda, Y.; Yoshida, S.; Watanabe, M.; Hasezawa, S.; Kondo, N.
An unidentified ultraviolet-B-specific photoreceptor mediates transcriptional activation of the cyclobutane pyrimidine dimer photolyase gene in plants
Planta
229
25-36
2008
Cucumis sativus
Henbest, K.B.; Maeda, K.; Hore, P.J.; Joshi, M.; Bacher, A.; Bittl, R.; Weber, S.; Timmel, C.R.; Schleicher, E.
Magnetic-field effect on the photoactivation reaction of Escherichia coli DNA photolyase
Proc. Natl. Acad. Sci. USA
105
14395-14399
2008
Escherichia coli
Pokorny, R.; Klar, T.; Hennecke, U.; Carell, T.; Batschauer, A.; Essen, L.O.
Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome
Proc. Natl. Acad. Sci. USA
105
21023-21027
2008
Arabidopsis thaliana (Q84RJ5)
Xu, F.; Vlak, J.M.; van Oers, M.M.
Conservation of DNA photolyase genes in group II nucleopolyhedroviruses infecting plusiine insects
Virus Res.
136
58-64
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Trichoplusia ni single nucleopolyhedrovirus, Plusia acuta nucleopolyhedrovirus, Pseudoplusia includens nucleopolyhedrovirus, Thysanoplusia orichalcea nucleopolyhedrovirus, Chrysodeixis chalcites nucleopolyhedrovirus
McLeod, N.R.; Brolich, M.A.; Damiani, M.J.; ONeill, M.A.
Distinct recognition loop dynamics in cryptochrome-DASH and photolyase revealed by limited proteolysis
Biochem. Biophys. Res. Commun.
385
424-429
2009
Synechococcus elongatus PCC 7942 = FACHB-805
Brolich, M.A.; Wang, L.; ONeill, M.A.
Folding kinetics of recognition loop peptides from a photolyase and cryptochrome-DASH
Biochem. Biophys. Res. Commun.
391
874-878
2010
Synechococcus elongatus PCC 7942 = FACHB-805
Damiani, M.J.; Yalloway, G.N.; Lu, J.; McLeod, N.R.; ONeill, M.A.
Kinetic stability of the flavin semiquinone in photolyase and cryptochrome-DASH
Biochemistry
48
11399-11411
2009
Synechococcus elongatus PCC 7942 = FACHB-805
Thiagarajan, V.; Villette, S.; Espagne, A.; Eker, A.P.; Brettel, K.; Byrdin, M.
DNA repair by photolyase: a novel substrate with low background absorption around 265 nm for transient absorption studies in the UV
Biochemistry
49
297-303
2010
Escherichia coli, Synechococcus elongatus PCC 7942 = FACHB-805
Mueller, M.; Carell, T.
Structural biology of DNA photolyases and cryptochromes
Curr. Opin. Struct. Biol.
19
277-285
2009
Synechococcus elongatus PCC 7942 = FACHB-805, Arabidopsis thaliana, Homo sapiens, Sulfurisphaera tokodaii, Escherichia coli (P00914), Thermus thermophilus (P61497)
Okafuji, A.; Biskup, T.; Hitomi, K.; Getzoff, E.D.; Kaiser, G.; Batschauer, A.; Bacher, A.; Hidema, J.; Teranishi, M.; Yamamoto, K.; Schleicher, E.; Weber, S.
Light-induced activation of class II cyclobutane pyrimidine dimer photolyases
DNA Repair
9
495-505
2010
Arabidopsis thaliana, Escherichia coli, Oryza sativa
Osburne, M.S.; Holmbeck, B.M.; Frias-Lopez, J.; Steen, R.; Huang, K.; Kelly, L.; Coe, A.; Waraska, K.; Gagne, A.; Chisholm, S.W.
UV hyper-resistance in Prochlorococcus MED4 results from a single base pair deletion just upstream of an operon encoding nudix hydrolase and photolyase
Environ. Microbiol.
12
1978-1988
2010
Prochlorococcus sp., Prochlorococcus sp. MED4
Kodali, G.; Siddiqui, S.U.; Stanley, R.J.
Charge redistribution in oxidized and semiquinone E. coli DNA photolyase upon photoexcitation: stark spectroscopy reveals a rationale for the position of Trp382
J. Am. Chem. Soc.
131
4795-4807
2009
Escherichia coli (P00914), Escherichia coli
Moldt, J.; Pokorny, R.; Orth, C.; Linne, U.; Geisselbrecht, Y.; Marahiel, M.A.; Essen, L.O.; Batschauer, A.
Photoreduction of the folate cofactor in members of the photolyase family
J. Biol. Chem.
284
21670-21683
2009
Arabidopsis thaliana, Escherichia coli
Xu, F.; Vlak, J.M.; Eker, A.P.; van Oers, M.M.
DNA photolyases of Chrysodeixis chalcites nucleopolyhedrovirus are targeted to the nucleus and interact with chromosomes and mitotic spindle structures
J. Gen. Virol.
91
907-914
2010
Chrysodeixis chalcites nucleopolyhedrovirus
Byrdin, M.; Lukacs, A.; Thiagarajan, V.; Eker, A.P.; Brettel, K.; Vos, M.H.
Quantum yield measurements of short-lived photoactivation intermediates in DNA photolyase: toward a detailed understanding of the triple tryptophan electron transfer chain
J. Phys. Chem. A
114
3207-3214
2010
Escherichia coli
Acocella, A.; Jones, G.A.; Zerbetto, F.
What is adenine doing in photolyase?
J. Phys. Chem. B
114
4101-4106
2010
Synechococcus elongatus PCC 7942 = FACHB-805
Sokolowsky, K.; Newton, M.; Lucero, C.; Wertheim, B.; Freedman, J.; Cortazar, F.; Czochor, J.; Schelvis, J.P.; Gindt, Y.M.
Spectroscopic and Thermodynamic Comparisons of Escherichia coli DNA Photolyase and Vibrio cholerae Cryptochrome 1
J. Phys. Chem. B
114
7121-7130
2010
Escherichia coli, Vibrio cholerae serotype O1
Lucas-Lledo, J.I.; Lynch, M.
Evolution of mutation rates: phylogenomic analysis of the photolyase/cryptochrome family
Mol. Biol. Evol.
26
1143-1153
2009
Cytobacillus firmus, Danio rerio, Saccharomyces cerevisiae, Escherichia coli, no activity in Caenorhabditis elegans, no activity in Candida albicans, no activity in Yarrowia lipolytica, no activity in Dictyostelium discoideum, no activity in Homo sapiens, no activity in Schizosaccharomyces pombe, Salmonella enterica subsp. enterica serovar Typhimurium, Tetraodon nigroviridis, no activity in Cryptococcus neoformans, no activity in Ashbya gossypii, no activity in Guillardia theta, no activity in Caenorhabditis briggsae
Matallana-Surget, S.; Douki, T.; Cavicchioli, R.; Joux, F.
Remarkable resistance to UVB of the marine bacterium Photobacterium angustum explained by an unexpected role of photolyase
Photochem. Photobiol. Sci.
8
1313-1320
2009
Photobacterium angustum S14, Sphingopyxis alaskensis RB2256
Isely, N.; Lamare, M.; Marshall, C.; Barker, M.
Expression of the DNA repair enzyme, photolyase, in developmental tissues and larvae, and in response to ambient UV-R in the Antarctic sea urchin Sterechinus neumayeri
Photochem. Photobiol.
85
1168-1176
2009
Evechinus chloroticus (C1KCC8), Mesocentrotus franciscanus (C1KCC9), Sterechinus neumayeri (C1KCD0), Sterechinus neumayeri
Kaiser, G.; Kleiner, O.; Beisswenger, C.; Batschauer, A.
Increased DNA repair in Arabidopsis plants overexpressing CPD photolyase
Planta
230
505-515
2009
Arabidopsis thaliana (Q9SB00), Arabidopsis thaliana
Sauguet, L.; Klinge, S.; Perera, R.L.; Maman, J.D.; Pellegrini, L.
Shared active site architecture between the large subunit of eukaryotic primase and DNA photolyase
PLoS ONE
5
e10083
2010
Saccharomyces cerevisiae
Chang, C.W.; Guo, L.; Kao, Y.T.; Li, J.; Tan, C.; Li, T.; Saxena, C.; Liu, Z.; Wang, L.; Sancar, A.; Zhong, D.
Ultrafast solvation dynamics at binding and active sites of photolyases
Proc. Natl. Acad. Sci. USA
107
2914-2919
2010
Caulobacter vibrioides, Escherichia coli
Chaves, I.; Pokorny, R.; Byrdin, M.; Hoang, N.; Ritz, T.; Brettel, K.; Essen, L.O.; van der Horst, G.T.; Batschauer, A.; Ahmad, M.
The cryptochromes: blue light photoreceptors in plants and animals
Annu. Plant Biol.
62
335-364
2011
Synechococcus elongatus PCC 7942 = FACHB-805, Escherichia coli
Brettel, K.; Byrdin, M.
Reaction mechanisms of DNA photolyase
Curr. Opin. Struct. Biol.
20
693-701
2010
Synechococcus elongatus PCC 7942 = FACHB-805, Escherichia coli
Biernat, M.A.; Ros, V.I.; Vlak, J.M.; van Oers, M.M.
Baculovirus cyclobutane pyrimidine dimer photolyases show a close relationship with lepidopteran host homologues
Insect Mol. Biol.
20
457-464
2011
Chrysodeixis chalcites nucleopolyhedrovirus, Spodoptera litura granulovirus, Trichoplusia ni (F2VYD0), Trichoplusia ni, Spodoptera exigua (F2VYD1), Spodoptera exigua, Chrysodeixis chalcites (F2VYD2), Chrysodeixis chalcites
Nalcacioglu, R.; Dizman, Y.A.; Vlak, J.M.; Demirbag, Z.; van Oers, M.M.
Amsacta moorei entomopoxvirus encodes a functional DNA photolyase (AMV025)
J. Invertebr. Pathol.
105
363-365
2010
Amsacta moorei entomopoxvirus
Xu, L.; Zhu, G.
The roles of several residues of Escherichia coli DNA photolyase in the highly efficient photo-repair of cyclobutane pyrimidine dimers
J. Nucleic Acids
2010
794782
2010
Escherichia coli
Takahashi, M.; Teranishi, M.; Ishida, H.; Kawasaki, J.; Takeuchi, A.; Yamaya, T.; Watanabe, M.; Makino, A.; Hidema, J.
Cyclobutane pyrimidine dimer (CPD) photolyase repairs ultraviolet-B-induced CPDs in rice chloroplast and mitochondrial DNA
Plant J.
66
433-442
2011
Oryza sativa
Chaves, I.; Nijman, R.M.; Biernat, M.A.; Bajek, M.I.; Brand, K.; da Silva, A.C.; Saito, S.; Yagita, K.; Eker, A.P.; van der Horst, G.T.
The potorous CPD photolyase rescues a cryptochrome-deficient mammalian circadian clock
PLoS ONE
6
e23447
2011
Potorous tridactylus
Thiagarajan, V.; Byrdin, M.; Eker, A.P.; Mueller, P.; Brettel, K.
Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV
Proc. Natl. Acad. Sci. USA
108
9402-9407
2011
Aspergillus nidulans
Sakofsky, C.; Runck, L.; Grogan, D.
Sulfolobus mutants, generated via PCR products, which lack putative enzymes of UV photoproduct repair
Archaea
2011
864015
2011
Sulfolobus acidocaldarius (Q4J9F6), Sulfolobus acidocaldarius, Sulfolobus acidocaldarius DSM 639 (Q4J9F6)
Wijaya, I.M.; Zhang, Y.; Iwata, T.; Yamamoto, J.; Hitomi, K.; Iwai, S.; Getzoff, E.D.; Kandori, H.
Detection of distinct alpha-helical rearrangements of cyclobutane pyrimidine dimer photolyase upon substrate binding by Fourier transform infrared spectroscopy
Biochemistry
52
1019-1027
2013
Escherichia coli
Kiontke, S.; Geisselbrecht, Y.; Pokorny, R.; Carell, T.; Batschauer, A.; Essen, L.O.
Crystal structures of an archaeal class II DNA photolyase and its complex with UV-damaged duplex DNA
EMBO J.
30
4437-4449
2011
Methanosarcina mazei, Methanosarcina mazei (Q8PYK9), Methanosarcina mazei DSM 3647 (Q8PYK9), Methanosarcina mazei Mm0852
Hitomi, K.; Arvai, A.S.; Yamamoto, J.; Hitomi, C.; Teranishi, M.; Hirouchi, T.; Yamamoto, K.; Iwai, S.; Tainer, J.A.; Hidema, J.; Getzoff, E.D.
Eukaryotic class II cyclobutane pyrimidine dimer photolyase structure reveals basis for improved ultraviolet tolerance in plants
J. Biol. Chem.
287
12060-12069
2012
Oryza sativa Japonica Group (Q6F6A2)
Biernat, M.A.; Eker, A.P.; van Oers, M.M.; Vlak, J.M.; van der Horst, G.T.; Chaves, I.
A baculovirus photolyase with DNA repair activity and circadian clock regulatory function
J. Biol. Rhythms
27
3-11
2012
Chrysodeixis chalcites nucleopolyhedrovirus
Azizoglu, S.; Kizilel, R.; Marusic, M.; Kavakli, I.H.; Erman, B.; Kizilel, S.
Computational and experimental investigation of DNA repair protein photolyase interactions with low molecular weight drugs
J. Mol. Recognit.
26
297-307
2013
Vibrio cholerae serotype O1
Wilson, T.J.; Crystal, M.A.; Rohrbaugh, M.C.; Sokolowsky, K.P.; Gindt, Y.M.
Evidence from thermodynamics that DNA photolyase recognizes a solvent-exposed CPD lesion
J. Phys. Chem. B
115
13746-13754
2011
Escherichia coli
Cahoon, L.A.; Stohl, E.A.; Seifert, H.S.
The Neisseria gonorrhoeae photolyase orthologue phrB is required for proper DNA supercoiling but does not function in photo-reactivation
Mol. Microbiol.
79
729-742
2011
Neisseria gonorrhoeae (Q5F659), Neisseria gonorrhoeae, Neisseria gonorrhoeae FA 1090 (Q5F659)
Albarracin, V.H.; Simon, J.; Pathak, G.P.; Valle, L.; Douki, T.; Cadet, J.; Borsarelli, C.D.; Farias, M.E.; Gaertner, W.
First characterisation of a CPD-class I photolyase from a UV-resistant extremophile isolated from high-altitude Andean lakes
Photochem. Photobiol. Sci.
13
739-750
2014
Acinetobacter sp. (F5ASF3), Acinetobacter sp. Ver3 (F5ASF3)
Teranishi, M.; Nakamura, K.; Furukawa, H.; Hidema, J.
Identification of a phosphorylation site in cyclobutane pyrimidine dimer photolyase of rice
Plant Physiol. Biochem.
63
24-29
2013
Triticum aestivum, Oryza meridionalis, Zea mays (B4F9R2), Zea mays, Hordeum vulgare (F2E786), Oryza sativa Japonica Group (Q6F6A2), Oryza meridionalis W1629, Oryza meridionalis W1299, Oryza sativa Japonica Group Sasanishiki (Q6F6A2)
Liu, Z.; Tan, C.; Guo, X.; Kao, Y.T.; Li, J.; Wang, L.; Sancar, A.; Zhong, D.
Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase
Proc. Natl. Acad. Sci. USA
108
14831-14836
2011
Escherichia coli
Sancar, A.
Mechanisms of DNA repair by photolyase and excision nuclease (Nobel lecture)
Angew. Chem. Int. Ed. Engl.
55
8502-8527
2016
Escherichia coli (P00914), Escherichia coli
Cohrs, K.; Schumacher, J.
The two cryptochrome/photolyase family proteins fulfill distinct roles in DNA photorepair and regulation of conidiation in the gray mold fungus Botrytis cinerea
Appl. Environ. Microbiol.
83
pii: e00812-17
2017
Botrytis cinerea (A0A384JIP4), Botrytis cinerea (A0A384JRT3), Botrytis cinerea, Botrytis cinerea B05.10 (A0A384JIP4), Botrytis cinerea B05.10 (A0A384JRT3)
Zhang, M.; Wang, L.; Zhong, D.
Photolyase dynamics and electron-transfer mechanisms of DNA repair
Arch. Biochem. Biophys.
632
158-174
2017
Caulobacter vibrioides (A0A0H3C7H5), Escherichia coli (P00914), Synechococcus elongatus PCC 7942 = FACHB-805 (P05327), Arabidopsis thaliana (Q84KJ5), Arabidopsis thaliana (Q9SB00), Methanosarcina mazei (Q8PYK9), Synechococcus elongatus PCC 7942 = FACHB-805 ATCC 27144 / PCC 6301 / SAUG 1402/1 (P05327), Caulobacter vibrioides NA1000/CB15N (A0A0H3C7H5), Methanosarcina mazei ATCC BAA-159 (Q8PYK9)
Schelvis, J.P.; Zhu, X.; Gindt, Y.M.
Enzyme-substrate binding kinetics indicate that photolyase recognizes an extrahelical cyclobutane thymidine dimer
Biochemistry
54
6176-6185
2015
Escherichia coli (P00914), Escherichia coli
Mueller, P.; Brettel, K.; Grama, L.; Nyitrai, M.; Lukacs, A.
Photochemistry of wild-type and N378D mutant E. coli DNA photolyase with oxidized FAD cofactor studied by transient absorption spectroscopy
Chemphyschem
17
1329-1340
2016
Escherichia coli (P00914), Escherichia coli
Jiang, T.; Wang, Y.; Tang, Z.; Huang, G.; Xu, H.; Qiao, D.; Cao, Y.
Repair activity of Gln336 on the FAD binding domain of CPD photolyase in Dunaliella salina under stress
Chin. J. Appl. Environ. Biol.
23
238-243
2017
Dunaliella salina (A0T3C8)
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Walter, D.; Boswell, M.; Volk de Garcia, S.; Walter, S.; Breitenfeldt, E.; Boswell, W.; Walter, R.
Characterization and differential expression of CPD and 6-4 DNA photolyases in Xiphophorus species and interspecies hybrids
Comp. Biochem. Physiol. C
163
77-85
2014
Xiphophorus couchianus, Xiphophorus maculatus, Xiphophorus maculatus Jp 163 B
Murata, Y.; Osakabe, M.
Photo-enzymatic repair of UVB-induced DNA damage in the two-spotted spider mite Tetranychus urticae
Exp. Appl. Acarol.
71
15-34
2017
Tetranychus urticae (T1KJB2), Tetranychus urticae (T1KJB4), Tetranychus urticae (T1L328), Tetranychus urticae (T1L330), Tetranychus urticae
Munshi, S.; Rajamoorthi, A.; Stanley, R.J.
Characterization of a cold-adapted DNA photolyase from C. psychrerythraea 34H
Extremophiles
21
919-932
2017
Colwellia psychrerythraea (Q485Z2), Colwellia psychrerythraea 34H / ATCC BAA-681 (Q485Z2)
Rousseau, B.J.G.; Shafei, S.; Migliore, A.; Stanley, R.J.; Beratan, D.N.
Determinants of photolyases DNA repair mechanism in Mesophiles and Extremophiles
J. Am. Chem. Soc.
140
2853-2861
2018
Sulfurisphaera tokodaii (F9VNB1), Escherichia coli (P00914), Synechococcus elongatus PCC 7942 = FACHB-805 (P05327), Thermus thermophilus (P61497), Synechococcus elongatus PCC 7942 = FACHB-805 ATCC 27144 / PCC 6301 / SAUG 1402/1 (P05327), Thermus thermophilus HB8 / ATCC 27634 / DSM 579 (P61497), Sulfurisphaera tokodaii DSM 16993 / JCM 10545 / NBRC 100140 / 7 (F9VNB1)
Gindt, Y.M.; Edani, B.H.; Olejnikova, A.; Roberts, A.N.; Munshi, S.; Stanley, R.J.
The missing electrostatic interactions between DNA substrate and Sulfolobus solfataricus DNA photolyase what is the role of charged amino acids in thermophilic DNA binding proteins?
J. Phys. Chem. B
120
10234-10242
2016
Saccharolobus solfataricus (F9VNB1), Saccharolobus solfataricus, Saccharolobus solfataricus DSM ATCC 35092 / DSM 1617 / JCM 11322 / P2 (F9VNB1)
Sato, R.; Kitoh-Nishioka, H.; Ando, K.; Yamato, T.
Electron transfer pathways of cyclobutane pyrimidine dimer photolyase revisited
J. Phys. Chem. B
122
6912-6921
2018
Synechococcus elongatus PCC 7942 = FACHB-805 (P05327), Synechococcus elongatus PCC 7942 = FACHB-805, Synechococcus elongatus PCC 7942 = FACHB-805 ATCC 27144 / PCC 6301 / SAUG 1402/1 (P05327)
Li, C.; Ma, L.; Mou, S.; Wang, Y.; Zheng, Z.; Liu, F.; Qi, X.; An, M.; Chen, H.; Miao, J.
Cyclobutane pyrimidine dimers photolyase from extremophilic microalga remarkable UVB resistance and efficient DNA damage repair
Mutat. Res.
773
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2015
Chlamydomonas sp. ICE-L (M4T971)
Su, Z.; Lian, G.; Mawatari, K.; Tang, P.; He, S.; Shimohata, T.; Wu, Y.; Yin, W.; Takahashi, A.
Identification and Purification of the CPD Photolyase in Vibrio parahaemolyticus RIMD2210633
Photochem. Photobiol.
91
1165-1172
2015
Vibrio parahaemolyticus RIMD 2210633 (Q87G46), Vibrio parahaemolyticus RIMD 2210633
Narayanan, M.; Singh, V.R.; Kodali, G.; Moravcevic, K.; Stanley, R.J.
An ethenoadenine FAD analog accelerates UV dimer repair by DNA photolyase
Photochem. Photobiol.
93
343-354
2017
Escherichia coli (P00914)
Sommer, C.; Dietz, M.; Patschkowski, T.; Mathes, T.; Kottke, T.
Light-induced conformational changes in the plant cryptochrome photolyase homology region resolved by selective isotope labeling and infrared spectroscopy
Photochem. Photobiol.
93
881-887
2017
Chlamydomonas reinhardtii (Q42696), Chlamydomonas reinhardtii
Kavakli, I.H.; Baris, I.; Tardu, M.; Guel, S.; Oener, H.; Cal, S.; Bulut, S.; Yarparvar, D.; Berkel, C.; Ustaoglu, P.; Aydin, C.
The photolyase/cryptochrome family of proteins as DNA repair enzymes and transcriptional repressors
Photochem. Photobiol.
93
93-103
2017
Cyanidioschyzon merolae (M1V3I5), Escherichia coli (P00914), Vibrio cholerae serotype O1 (Q9KNA8), Vibrio cholerae serotype O1 (Q9KR33), Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961 (Q9KNA8), Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961 (Q9KR33), Cyanidioschyzon merolae 10D (M1V3I5)
Liu, Z.; Wang, L.; Zhong, D.
Dynamics and mechanisms of DNA repair by photolyase
Phys. Chem. Chem. Phys.
17
11933-11949
2015
Escherichia coli (P00914)
Zhang, M.; Wang, L.; Shu, S.; Sancar, A.; Zhong, D.
Bifurcating electron-transfer pathways in DNA photolyases determine the repair quantum yield
Science
354
209-213
2016
Caulobacter vibrioides (A0A0H3C7H5), Escherichia coli (P00914), Synechococcus elongatus PCC 7942 = FACHB-805 (P05327), Drosophila melanogaster (Q24443), Arabidopsis thaliana (Q84KJ5), Arabidopsis thaliana (Q9SB00), Caulobacter vibrioides NA1000 / CB15N (A0A0H3C7H5), Synechococcus elongatus PCC 7942 = FACHB-805 ATCC 27144 / PCC 6301 / SAUG 1402/1 (P05327)
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