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Reference on EC 4.1.1.39 - ribulose-bisphosphate carboxylase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Penarrubia, L.; Moreno, J.
Ribulose 1,5-bisphosphate carboxylase/oxygenase from citrus leaves
Phytochemistry
27
1999-2004
1988
Citrus sinensis
-
Manually annotated by BRENDA team
Heda, G.D.; Madigan, M.T.
Thermal properties and oxygenase activity of ribulose-1,5-bisphosphate carboxylase from the thermophilic purple bacterium Chromatium tepidum
FEMS Microbiol. Lett.
51
45-50
1988
Allochromatium vinosum, Thermochromatium tepidum
-
Manually annotated by BRENDA team
Holuigue, L.; Herrera, L.; Phillips, O.M.; Young, M.; Alende, J.E.
CO2 fixation by mineral-leaching bacteria: characteristics of the ribulose bisphosphate carboxylase-oxygenase of Thiobacilllus ferrooxidans
Biotechnol. Appl. Biochem.
9
497-505
1987
Acidithiobacillus ferrooxidans
-
Manually annotated by BRENDA team
Newman, S.M.; Cattolico, R.A.
Structural, functional, and evolutionary analysis of ribulose-1,5-bisphosphate carboxylase from chromophytic alga Olisthodiscus luteus
Plant Physiol.
84
483-490
1987
Olisthodiscus luteus
Manually annotated by BRENDA team
Torres-Ruiz, J.; McFadden, B.A.
The nature of L8 and L8S8 forms of ribulose bisphosphate carboxylase/oxygenase from Chromatium vinosum
Arch. Biochem. Biophys.
254
63-68
1987
Allochromatium vinosum
Manually annotated by BRENDA team
Van Vu, J.C; Bowes, G.; Allen, L.H.
Properties of ribulose-1,5-bisphosphate carboxylase from dark- and light-exposed soybean leaves
Plant Sci.
44
119-123
1986
Glycine max
-
Manually annotated by BRENDA team
Bergenhem, N.; Carlsson, U.
Rapid ion-exchange chromatography for preparative separations of proteins. II. Application to anaerobic purification of ribulose-1,5-bisphosphate carboxylase/oxygenase
J. Chromatogr.
360
279-281
1986
Spinacia oleracea
-
Manually annotated by BRENDA team
Paechi, C.; Dybing, C.D.
Purification and degradation of ribulose bisphosphate carboxylase from soybean leaves
Plant Physiol.
81
97-102
1986
Glycine max
Manually annotated by BRENDA team
Terzaghi, B.E.; Laing, W.A.; Christeller, J.T.; Petersen, G.B.; Hill, D.F.
Ribulose 1,5-bisphosphate carboxylase. Effect on the catalytic properties of changing methionine-330 to leucine in the Rhodospirillum rubrum enzyme
Biochem. J.
235
839-846
1986
Rhodospirillum rubrum
Manually annotated by BRENDA team
Plumley, F.G.; Kirchman, D.L.; Hodson, R.E.; Schmidt, G.W.
Ribulose bisphosphate carboxylase from three chlorophyll c-containing algae
Plant Physiol.
80
685-691
1986
Chlamydomonas reinhardtii, Coccolithophora sp., Cryptomonas sp., Cylindrotheca fusiformis
Manually annotated by BRENDA team
Salvucci, M.E.; Portis, A.R.; Orgen, W.L.
Purification of ribulose-1,5-bisphosphate carboxylase/oxygenase large with high specific activity by fast protein liquid chromatography
Anal. Biochem.
153
97-101
1986
Spinacia oleracea
Manually annotated by BRENDA team
Toman, P.D.; Lynch, J.J.; Schmidt, R.R.
Purification and partial characterization of ribulose bisphosphate carboxylase holoenzyme and its subunits from Chlorella sorokinia and use of its antigen affinity-purified antibodies in specific immunoprecipitation and immunoadsorption procedures
Plant Physiol.
79
806-814
1985
Chlorella sorokiniana
Manually annotated by BRENDA team
Makino, A.; Mae, T.; Ohira, K.
Enzymic properties of ribulose-1,5-bisphosphate carboxylase/oxygenase purified from rice leaves
Plant Physiol.
79
57-61
1985
Oryza sativa
Manually annotated by BRENDA team
Hammond, R.W.; Ryan, F.J.
Partial purification and characterization of ribulose-1,5-bisphophate carboxylase from the developing endosperm tissue of Zea mays L
J. Plant Physiol.
119
97-107
1985
Zea mays
-
Manually annotated by BRENDA team
Servaites, J.C.
Crystalline ribulose bisphosphate carboxylase/oxygenase of high integrity and catalytic activity from Nicotiana tabacum
Arch. Biochem. Biophys.
238
154-160
1985
Nicotiana tabacum
Manually annotated by BRENDA team
Burnap, R.L.; Trench, R.K.
Isolation and characterization of ribulose bisphosphate carboxylase from the cyanellae of Cyanophora paradoxa
FEMS Microbiol. Lett.
21
271-275
1984
Cyanophora paradoxa
-
Manually annotated by BRENDA team
Jordan, D.B.; Ogren, W.L.
Species variation in kinetic properties of ribulose 1,5-bisphosphate carboxylase/oxygenase
Arch. Biochem. Biophys.
227
425-433
1983
Amaranthus hybridus, Aphanizomenon flos-aquae, Aphanocapsa alpicola, Echinochloa crus-galli, Glycine max, Helianthus maximus, Medicago sativa, Nicotiana tabacum, Panicum milioides, Petroselinum crispum, Plectonema borganum, Polypodium aureum, Portulaca oleracea, Rhodospirillum rubrum, Setaria italica, Solanum lycopersicum, Sorghum bicolor, Spinacia oleracea, Zea mays
Manually annotated by BRENDA team
Reger, B.J.; Ku, M.S.B.; Potter, J.W.; Evans, J.J.
Purification and characterization of maize ribulose-1,5-bisphosphate carboxylase
Phytochemistry
22
1127-1132
1983
Zea mays
-
Manually annotated by BRENDA team
Simpson, S.A.; Lawlis, V.B.; Mueller, D.D.
Ribulose-1,5-bisphosphate carboxylase from comfrey: isolation and characterization
Phytochemistry
22
1121-1125
1983
Symphytum sp.
-
Manually annotated by BRENDA team
Asami, S.; Takabe, T.; Akazawa, T.; Codd, G.A.
Ribulose 1,5-bisphosphate carboxylase from the halophilic cyanobacterium Aphanothece halophytica
Arch. Biochem. Biophys.
225
713-721
1983
Aphanothece halophytica
Manually annotated by BRENDA team
Schloss, J.V.; Phares, E.F.; Long, M.V.; Norton, I.L.; Stringer, C.D.; Hartman, F.C.
Ribulosebisphosphate carboxylase/oxygenase from Rhodospirillum rubrum
Methods Enzymol.
90
522-528
1982
Rhodospirillum rubrum
Manually annotated by BRENDA team
Ranty, B.; Cavalie, G.
Purification and properties of ribulose 1,5-bisphosphate carboxylase from sunflower leaves
Planta
155
388-391
1982
Helianthus annuus
Manually annotated by BRENDA team
Purhohit, K.; Becker, R.R.; Evans, H.J.
D-Ribulose-1,5-bisphosphate carboxylase/oxygenase from chemolithotrophically grown Rhizobium japonicum
Biochim. Biophys. Acta
715
230-239
1982
Bradyrhizobium japonicum
-
Manually annotated by BRENDA team
Rejda, J.M.; Johal, S.; Chollet, R.
Enzymic and physicochemical characterization of ribulose 1,5-bisphosphate carboxylase/oxygenase from diploid and tetraploid cultivars of perennial ryegrass
Arch. Biochem. Biophys.
210
617-624
1981
Lolium perenne
Manually annotated by BRENDA team
Chollet, R.
Inactivation of crystalline tobacco ribulosebisphosphate carboxylase by modification of arginine residues with 2,3-butanedione and phenylglyoxal
Biochim. Biophys. Acta
658
177-190
1981
Nicotiana tabacum
Manually annotated by BRENDA team
Johal, S.; Bourque, D.P.; Smith, W.W.; Suh, S.W.; Eisenberg, D.
Crystallization and characterization of ribulose 1,5-bisphosphate carboxylase/oxygenase from eight plant species
J. Biol. Chem.
255
8873-8880
1980
Gossypium hirsutum, Medicago sativa, Nicotiana sylvestris, Nicotiana tabacum, Solanum lycopersicum, Solanum tuberosum, Spinacia oleracea, Zea mays
Manually annotated by BRENDA team
Taylor, S.C.; Dow, C.S.
Ribulose-1,5-bisphosphate carboxylase from Rhodomicrobium vannielii
J. Gen. Microbiol.
116
81-87
1980
Rhodomicrobium vannielii
-
Manually annotated by BRENDA team
Badger, M.R.
Kinetic properties of ribulose 1,5-bisphosphate carboxylase/oxygenase from Anabaena variabilis
Arch. Biochem. Biophys.
201
247-254
1980
Trichormus variabilis
Manually annotated by BRENDA team
Tomimatsu, Y.
Macromolecular properties and subunit interactions of ribulose-1,5-bisphosphate carboxylase from alfalfa
Biochim. Biophys. Acta
622
85-93
1980
Medicago sativa
Manually annotated by BRENDA team
Harrison, D.; Rogers, L.J.; Smith, A.J.
D-Ribulose 1,5-bisphosphate carboxylase of the nitrifying bacterium, Nitrobacter agilis
FEMS Microbiol. Lett.
6
47-51
1979
Nitrobacter winogradskyi
-
Manually annotated by BRENDA team
Codd, G.A.; Cook, C.M.; Stewart, W.D.P.
Purification and subunit structure of D-ribulose 1,5-bisphosphate carboxylase from the cyanobacterium Aphanothece halophytica
FEMS Microbiol. Lett.
6
81-86
1979
Aphanothece halophytica
-
Manually annotated by BRENDA team
Ford, T.W.
Ribulose 1,5-bisphosphate carboxylase from the thermophilic, acidophilic alga, Cyanidium caldarium (Geitler). Purification, characterization and thermostability of the enzyme
Biochim. Biophys. Acta
569
239-248
1979
Cyanidium caldarium
Manually annotated by BRENDA team
Schloss, J.V.; Phares, E.F.; Long, M.V.; Norton, I.L.; Stringer, C.D.; Hartman, F.C.
Isolation, characterization, and crystallization of ribulosebisphosphate carboxylase from autotrophically grown Rhodospirillum rubrum
J. Bacteriol.
137
490-501
1979
Rhodospirillum rubrum
Manually annotated by BRENDA team
Bowien, B.
D-Ribulose 1,5-bisphosphate carboxylase from Paracoccus denitrificans
FEMS Microbiol. Lett.
2
263-266
1977
Paracoccus denitrificans
-
Manually annotated by BRENDA team
Choe, H.W.; Georgalis, Y.; Saenger, W.
Comparative studies of ribulose-1,5-bisphosphate carboxylase/oxygenase from Alcaligenes eutrophus H16 cells, in the active and CABP-inhibited forms
J. Mol. Biol.
207
621-623
1989
Cupriavidus necator
Manually annotated by BRENDA team
Bowien, B.; Mayer, F.; Codd, G.A.; Schlegel, H.G.
Purification, some properties and quaternary structure of the D-ribulose 1,5-diphosphate carboxylase of Alcaligens eutrophus
Arch. Microbiol.
110
157-166
1976
Cupriavidus necator
Manually annotated by BRENDA team
Goldthwaite, J.; Bogorad, L.
Ribulose-1,5-diphosphate carboxylase from leaf
Methods Enzymol.
42C
481-484
1975
Citrus sinensis, Glycine max, Gossypium hirsutum, Helianthus annuus, Helianthus maximus, Medicago sativa, Solanum lycopersicum, Nicotiana tabacum, Oryza sativa, Petroselinum crispum, Solanum tuberosum, Sorghum bicolor, Spinacia oleracea, Zea mays
-
Manually annotated by BRENDA team
Anderson, L.E.
Ribulose-1,5-diphosphate carboxylase from Rhodospirillum rubrum
Methods Enzymol.
42C
457-461
1975
Rhodospirillum rubrum
Manually annotated by BRENDA team
McFadden, B.A.; Tabita, F.R.; Kuehn, G.D.
Ribulose-diphosphate carboxylase from the hydrogen bacteria and Rhodospirillum rubrum
Methods Enzymol.
42C
461-472
1975
Cupriavidus necator, Acidovorax facilis, Rhodospirillum rubrum
Manually annotated by BRENDA team
Siegel, M.I.; Lane, M.D.
Ribulose-diphosphate carboxylase from spinach leaves
Methods Enzymol.
42C
472-489
1975
Spinacia oleracea
-
Manually annotated by BRENDA team
Chapman, M.S.; Suh, S.W.; Curmi, P.M.; Cascio, D.; Smith, W.W
Tertiary structure of plant RuBisCo: domains and their contacts
Science
241
71-74
1988
Nicotiana tabacum
Manually annotated by BRENDA team
Cook, C.M.; Lanaras, T.; Wood, A.P.; Codd, G.A.; Kelly, D.P.
Kinetic properties of ribulose bisphosphate carboxylase/oxygenase from Thiobacillus thyasiris, the putative symbiont ot Thyasira flexuosa (Montagu), a bivalve mussel
J. Gen. Microbiol.
137
1491-1496
1991
Thiomicrospira thyasirae
-
Manually annotated by BRENDA team
Viale, A.M.; Kobayashi, H.; Akazawa, T.
Distinct properties of Escherichia coli products of plant-type ribulose-1,5-bisphosphate carboxylase/oxygenase directed by two sets of genes from the photosynthetic bacterium Chromatium vinosum
J. Biol. Chem.
265
18386-18392
1990
Allochromatium vinosum
Manually annotated by BRENDA team
Heda, C.D.; Madigan, M.T.
Purification and characterization of the thermostable ribulose-1,5-bisphosphate carboxylase/oxygenase from the thermophilic purple bacterium Chromatium tepidum
Eur. J. Biochem.
184
313-319
1989
Thermochromatium tepidum
Manually annotated by BRENDA team
Lee, B.; Read, B.A.; Tabita, F.R.
Catalytic properties of recombinant octameric, hexadecameric, and heterologous cyanobacterial/bacterial ribulose-1,5-bisphosphate carboxylase/oxygenase
Arch. Biochem. Biophys.
291
263-269
1991
Synechococcus elongatus PCC 7942 = FACHB-805
Manually annotated by BRENDA team
Smrka, A.V.; Ramage, R.T.; Bohnert, H.J.; Jensen, R.G.
Purification and characterization of large and small subunits of ribulose 1,5-bisphosphate carboxylase expressed separately in Escherichia coli
Arch. Biochem. Biophys.
286
6-13
1991
Synechococcus sp.
Manually annotated by BRENDA team
Yokota, A.; Tsujimoto, N.
Characterization of ribulose-1,5-bisphosphate carboxylase/oxygenase carrying ribulose 1,5-bisphosphate at its regulatory sites and the mechanism of interaction of this form of the enzyme with ribulose-1,5-bisphosphate-carboxylase/oxygenase activase
Eur. J. Biochem.
204
901-909
1992
Spinacia oleracea
Manually annotated by BRENDA team
Yen, A.; Haas, E.J.; Selbo, K.M.; Ross, C.R.; Spreitzer, R.J.; Stezowski, J.J.
Preliminary X-ray crystallographic study of wild-type and mutant ribulose-1,5-bisphosphate carboxylase/oxygenase from Chlamydomonas reinhardtii
Acta Crystallogr. Sect. D
54
668-670
1998
Chlamydomonas reinhardtii
-
Manually annotated by BRENDA team
Wang, X.; Tabita, F.R.
Reversible inactivation and characterization of purified inactivated form I ribulose 1,5-bisphosphate carboxylase/oxygenase of Rhodobacter sphaeroides
J. Bacteriol.
174
3593-3600
1992
Cereibacter sphaeroides
Manually annotated by BRENDA team
Chung, S.Y.; Yaguchi, T.; Nishihara, H.; Igarashi, Y.; Kodama, T.
Purification of form L2 RubisCO from a marine obligatory autotrophic hydrogen-oxidizing bacterium, Hydrogenovibrio marinus strain MH-110
FEMS Microbiol. Lett.
109
49-54
1993
Hydrogenovibrio marinus
Manually annotated by BRENDA team
Hosur, M.V.; Sainis, J.K.; Kannan, K.K.
Crystallization and x-ray analysis of a multienzyme complex containing RUBISCO and RuBP
J. Mol. Biol.
234
1274-1278
1993
Spinacia oleracea
Manually annotated by BRENDA team
Read, B.A.; Tabita, F.R.
High substrate specificity factor ribulose bisphosphate carboxylase/oxygenase from eukaryotic marine algae and properties of recombinant cyanobacterial rubisco containing algal residue modifications
Arch. Biochem. Biophys.
312
210-218
1994
Cryptomonas sp., Cylindrotheca fusiformis, Cylindrotheca sp., Olisthodiscus luteus, Porphyridium purpureum, Spinacia oleracea, Synechococcus sp., Cylindrotheca sp. N1
Manually annotated by BRENDA team
Rajagopalan, R.; Altekar, W.
Characterisation and purification of ribulose-bisphosphate carboxylase from heterotrophically grown halophilic archaebacterium Haloferax mediterranei
Eur. J. Biochem.
221
863-869
1994
Haloferax mediterranei
Manually annotated by BRENDA team
Khan, M.A.; Dixit, A.; Upadhyaya, K.C.
Purification and characterization of ribulose-1,5-bisphosphate carboxylase from triticale
Indian J. Biochem. Biophys.
31
121-126
1994
Secale cereale x Triticum aestivum
Manually annotated by BRENDA team
Bainbridge, G.; Madgwick, P.; Parmar, S.; Mitchell, R.; Paul, M.; Pitts, J.; Keys, A.J.; Parry, M.A.J.
Engineering rubisco to change its catalytic properties
J. Exp. Bot.
46
1269-1276
1995
Synechococcus elongatus PCC 7942 = FACHB-805
-
Manually annotated by BRENDA team
Stein, J.L.; Felbeck, H.
Kinetic and physical properties of a recombinant RuBisCO from a chemoautotrophic endosymbiont
Mol. Mar. Biol. Biotechnol.
2
280-290
1993
Alviniconcha hessleri
Manually annotated by BRENDA team
Hernandez, J.M.; Baker, S.H.; Lorbach, S.C.; Shively, J.M.; Tabita, F.R.
Deduced amino acid sequence, functional expression, and unique enzymatic properties of the form I and form II ribulose bisphosphate carboxylase/oxygenase from the chemoautotrophic bacterium Thiobacillus denitrificans
J. Bacteriol.
178
347-356
1996
Thiobacillus denitrificans
Manually annotated by BRENDA team
Parry, M.A.J.; Andralojc, P.J.; Lowe, H.M.; Keys, A.J.
The localisation of 2-carboxy-D-arabinitol 1-phosphate and inhibition of rubisco in leaves of Phaseolus vulgaris L.
FEBS Lett.
444
106-110
1999
Phaseolus vulgaris
Manually annotated by BRENDA team
Kim, E.Y.; To, Y.T.; Kim, Y.M.
Purification and some properties of ribulose 1,5-bisphosphate carboxylase/oxygenase from Acinetobacter sp. strain JC1 and Hydrogenophaga pseudoflava
Mol. Cells
7
380-388
1997
Acinetobacter sp., Acinetobacter sp. JCI, Hydrogenophaga pseudoflava
Manually annotated by BRENDA team
Kane, H.J.; Wilkin, J.M.; Portis, A.R.; Andrews, T.J.
Potent inhibition of ribulose-bisphosphate carboxylase by an oxidized impurity in ribulose-1,5-bisphosphate
Plant Physiol.
117
1059-1069
1998
Spinacia oleracea
Manually annotated by BRENDA team
Kaneveski, I.; Maliga, P.; Rhoades, D.F.; Gutteridge, S.
Plastome engineering of ribulose-1,5-bisphosphate carboxylase/oxygenase in tobacco to form sunflower large subunit and tobacco small subunit hybrid
Plant Physiol.
119
133-141
1999
Helianthus annuus, Nicotiana tabacum, Synechococcus sp.
Manually annotated by BRENDA team
Hansen, S.; Hough, E.; Andersen, K.
Purification, crystallization, and preliminary x-ray studies of two isoforms of rubisco from Alcaligens eutrophus
Acta Crystallogr. Sect. D
55
310-313
1999
Cupriavidus necator
Manually annotated by BRENDA team
Smith, H.B.; Larimer, F.W.; Hartman, F.C.
An engineered change in substrate specificity of ribulosebisphosphate carboxylase/oxygenase
J. Biol. Chem.
265
1243-1245
1990
Rhodospirillum rubrum
Manually annotated by BRENDA team
McCarthy, J.T.; Charles, A.M.
Properties and regulation of ribulose diphosphate carboxylase from Thiobacillus novellus
Arch. Microbiol.
105
51-59
1975
Starkeya novella
Manually annotated by BRENDA team
Stoner, M.T.; Shively, J.M.
Cloning and expression of the D-ribulose-1,5-bisphosphate carboxylase/oxygenase form II gene from Thiobacillus intermedius in Escherichia coli
FEMS Microbiol. Lett.
107
287-292
1993
Thiomonas intermedia
Manually annotated by BRENDA team
Shively, J.M.; Saluja, A.; McFadden, B.A.
Ribulose bisphosphate carboxylase from methanol-grown Paracoccus denitrificans
J. Bacteriol.
134
1123-1132
1978
Paracoccus denitrificans
Manually annotated by BRENDA team
Tabita, F.R.; McFadden, B.A.
Molecular and catalytic properties of ribulose 1,5-bisphosphate carboxylase from the photosynthetic extreme halophile Ectothiorhodospira halophila
J. Bacteriol.
126
1271-1277
1976
Halorhodospira halophila
Manually annotated by BRENDA team
McFadden, B.A.; Lord, J.M.; Rowe, A.; Dilks, S.
Composition, quaternary structure, and catalytic properties of D-ribulose-1,5-bisphosphate carboxylase from Euglena gracilis
Eur. J. Biochem.
54
195-206
1975
Euglena gracilis
Manually annotated by BRENDA team
Gibson, J.L.; Tabita, F.R.
Activation of ribulose 1,5-bisphosphate carboxylase from Rhodopseudomonas sphaeroides: probable role of the small subunit
J. Bacteriol.
140
1023-1027
1979
Cereibacter sphaeroides
Manually annotated by BRENDA team
Gibson, J.L.; Tabita, F.R.
Isolation and preliminary charcterization of two forms of ribulose 1,5-bisphosphate carboxylase from Rhodopseudomonas capsulata
J. Bacteriol.
132
818-823
1977
Rhodobacter capsulatus
Manually annotated by BRENDA team
Spreitzer, R.J.; Salvucci, M.E.
Rubisco: Structure, regulatory interactions, and possibilities for a better enzyme
Annu. Rev. Plant Biol.
53
449-475
2002
Cupriavidus necator, Anabaena sp., Trichormus variabilis, Synechococcus elongatus PCC 7942 = FACHB-805, Arabidopsis thaliana, Chlamydomonas reinhardtii, Chlorobaculum tepidum, Cylindrotheca sp., Flaveria bidentis, Galdieria partita, Helianthus annuus, Solanum lycopersicum, Nicotiana tabacum, Oryza sativa, Thermococcus kodakarensis, Rhodospirillum rubrum, Spinacia oleracea, Synechococcus sp., Zea mays, Amphidinium carterae, Anabaena sp. CA
Manually annotated by BRENDA team
Wang, Y.L.; Zhou, J.H.; Wang, Y.F.; Bao, J.S.; Chen, H.B.
Properties of hybrid enzymes between Synechococcus large subunits and higher plant small subunits of ribulose-1,5-bisphosphate carboxylase/oxygenase in Escherichia coli
Arch. Biochem. Biophys.
396
35-42
2001
Synechococcus sp., Synechococcus sp. PCC6301
Manually annotated by BRENDA team
John Andrews, T.; Whitney, S.M.
Manipulating ribulose bisphosphate carboxylase/oxygenase in the chloroplasts of higher plants
Arch. Biochem. Biophys.
414
159-169
2003
Arabidopsis thaliana, Flaveria bidentis, Galdieria sulphuraria, Griffithsia monilis, Nicotiana tabacum, Oryza sativa, Phaeodactylum tricornutum, Rhodospirillum rubrum, Synechocystis sp.
Manually annotated by BRENDA team
Invernizzi, C.; Imhof, J.; Burkard, G.; Schmid, K.; Boschetti, A.
Effects of mutations at the two processing sites of the precursor for the small subunit of ribulose-bisphosphate carboxylase in Chlamydomonas reinhardtii
Biochem. J.
366
989-998
2002
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Harpel, M.R.; Larimer, F.W.; Hartman, F.C.
Multifaceted roles of Lys166 of ribulose-bisphosphate carboxylase/oxygenase as discerned by product analysis and chemical rescue of site-directed mutants
Biochemistry
41
1390-1397
2002
Rhodospirillum rubrum
Manually annotated by BRENDA team
Esquivel, M.G.; Anwaruzzaman, M.; Spreitzer, R.J.
Deletion of nine carboxy-terminal residues of the Rubisco small subunit decreases thermal stability but does not eliminate function
FEBS Lett.
520
73-76
2002
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Okano, Y.; Mizohata, E.; Xie, Y.; Matsumura, H.; Sugawara, H.; Inoue, T.; Yokota, A.; Kai, Y.
X-ray structure of Galdieria Rubisco complexed with one sulfate ion per active site
FEBS Lett.
527
33-36
2002
Galdieria partita
Manually annotated by BRENDA team
Reddy, A.R.; Das, V.S.
Photosynthesis and kinetic characteristics of rubisco in Hibiscus cannabinus L
Indian J. Exp. Biol.
38
841-844
2000
Abelmoschus esculentus, Hibiscus cannabinus
Manually annotated by BRENDA team
Watson, G.M.; Yu, J.P.; Tabita, F.R.
Unusual ribulose 1,5-bisphosphate carboxylase/oxygenase of anoxic Archaea
J. Bacteriol.
181
1569-1575
1999
Archaeoglobus fulgidus, Methanocaldococcus jannaschii (Q58632), Methanocaldococcus jannaschii
Manually annotated by BRENDA team
Marcus, Y.; Altman-Gueta, H.; Finkler, A.; Gurevitz, M.
Dual role of cysteine 172 in redox regulation of ribulose 1,5-bisphosphate carboxylase/oxygenase activity and degradation
J. Bacteriol.
185
1509-1517
2003
Synechocystis sp.
Manually annotated by BRENDA team
Sugawara, H.; Yamamoto, H.; Shibata, N.; Inoue, T.; Okada, S.; Miyake, C.; Yokota, A.; Kai, Y.
Crystal structure of carboxylase reaction-oriented ribulose 1, 5-bisphosphate carboxylase/oxygenase from a thermophilic red alga, Galdieria partita
J. Biol. Chem.
274
15655-15661
1999
Galdieria partita
Manually annotated by BRENDA team
Moreno, J.; Spreitzer, R.J.
C172S substitution in the chloroplast-encoded large subunit affects stability and stress-induced turnover of ribulose-1,5-bisphosphate carboxylase/oxygenase
J. Biol. Chem.
274
26789-26793
1999
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Ezaki, S.; Maeda, N.; Kishimoto, T.; Atomi, H.; Imanaka, T.
Presence of a structurally novel type ribulose-bisphosphate carboxylase/oxygenase in the hyperthermophilic archaeon, Pyrococcus kodakaraensis KOD1
J. Biol. Chem.
274
5078-5082
1999
Thermococcus kodakarensis
Manually annotated by BRENDA team
Du, Y.C.; Spreitzer, R.J.
Suppressor mutations in the chloroplast-encoded large subunit improve the thermal stability of wild-type ribulose-1,5-bisphosphate carboxylase/oxygenase
J. Biol. Chem.
275
19844-19847
2000
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Taylor, T.C.; Backlund, A.; Bjorhall, K.; Spreitzer, R.J.; Andersson, I.
First crystal structure of Rubisco from a green alga, Chlamydomonas reinhardtii
J. Biol. Chem.
276
48159-48164
2001
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Maeda, N.; Kanai, T.; Atomi, H.; Imanaka, T.
The unique pentagonal structure of an archaeal Rubisco is essential for its high thermostability
J. Biol. Chem.
277
31656-31662
2002
Thermococcus kodakarensis (O93627), Thermococcus kodakarensis
Manually annotated by BRENDA team
Hatayama, R.; Takahashi, R.; Ohshima, M.; Shibasaki, R.; Tokuyama, T.
Ribulose-1,5-bisphosphate carboxylase/oxygenase from an ammonia-oxidizing bacterium, Nitrosomonas sp. K1: Purification and properties
J. Biosci. Bioeng.
90
426-430
2000
Nitrosomonas sp.
Manually annotated by BRENDA team
Parry, M.A.; Andralojc, P.J.; Mitchell, R.A.; Madgwick, P.J.; Keys, A.J.
Manipulation of Rubisco: the amount, activity, function and regulation
J. Exp. Bot.
54
1321-1333
2003
Allochromatium vinosum, Arabidopsis thaliana, Avena sativa, Chlamydomonas reinhardtii, Cylindrotheca sp., Flaveria bidentis, Galdieria partita, Galdieria sulphuraria, Glycine max, Helianthus annuus, Hordeum vulgare, Solanum lycopersicum, Nicotiana tabacum, Olisthodiscus luteus, Oryza sativa, Petunia sp., Phaeodactylum tricornutum, Pisum sativum, Rhodobacter capsulatus, Cereibacter sphaeroides, Rhodospirillum rubrum, Spinacia oleracea, Triticum aestivum, Zea mays, Cylindrotheca sp. N1
Manually annotated by BRENDA team
Maeda, N.; Kitano, K.; Fukui, T.; Ezaki, S.; Atomi, H.; Miki, K.; Imanaka, T.
Ribulose bisphosphate carboxylase/oxygenase from the hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1 is composed solely of large subunits and forms a pentagonal structure
J. Mol. Biol.
293
57-66
1999
Thermococcus kodakarensis
Manually annotated by BRENDA team
Mizohata, E.; Matsumura, H.; Okano, Y.; Kumei, M.; Takuma, H.; Onodera, J.; Kato, K.; Shibata, N.; Inoue, T.; Yokota, A.; Kai, Y.
Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate
J. Mol. Biol.
316
679-691
2002
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Smith, S.A.; Tabita, F.R.
Positive and negative selection of mutant forms of prokaryotic (cyanobacterial) ribulose-1,5-bisphosphate carboxylase/oxygenase
J. Mol. Biol.
331
557-569
2003
Synechococcus sp., Synechococcus sp. PCC6301
Manually annotated by BRENDA team
Tabita, F.R.
Microbial ribulose 1,5-bisphosphate carboxylase/oxygenase: A different perspective
Photosynth. Res.
60
1-28
1999
Acidithiobacillus ferrooxidans, Cupriavidus necator, Allochromatium vinosum, Anabaena sp., Archaeoglobus fulgidus, Bacillus subtilis, Bradyrhizobium japonicum, Chlorobium limicola, Chlorobaculum tepidum, Cyanidium caldarium, Cylindrotheca fusiformis, Cylindrotheca sp., Galdieria partita, Haloferax sp., Hydrogenovibrio marinus, Methanocaldococcus jannaschii, Nicotiana tabacum, Olisthodiscus luteus, Porphyridium purpureum, Pyrococcus sp., Pyrococcus horikoshii, Thermococcus kodakarensis, Rhodobacter capsulatus, Cereibacter sphaeroides, Rhodospirillum rubrum, Synechococcus sp., Thiobacillus denitrificans, Thiomonas intermedia, Halothiobacillus neapolitanus, Xanthobacter flavus, Trematocarpus dichotomus, Amphidinium carterae, Symbiodinium sp., Hydrogenovibrio marinus L2, Synechococcus sp. 6301, Cylindrotheca sp. N1
-
Manually annotated by BRENDA team
Spreitzer, R.J.
Questions about the complexity of chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
Photosynth. Res.
60
29-42
1999
Arabidopsis sp., Chlamydomonas reinhardtii, Glycine max, Helianthus annuus, Hordeum vulgare, Solanum lycopersicum, Marchantia sp., Nicotiana tabacum, Petunia sp., Pisum sativum, Solanum tuberosum, Spinacia oleracea, Triticum aestivum, Zea mays
-
Manually annotated by BRENDA team
Schlitter, J.; Wildner, G.F.
The kinetics of conformation change as determinant of Rubisco's specificity
Photosynth. Res.
65
7-13
2000
Galdieria partita, Rhodospirillum rubrum, Spinacia oleracea, Synechococcus sp.
Manually annotated by BRENDA team
Lopez, Y.; Riano, N.; Mosquera, P.; Cadavid, A.; Arcila, J.
Activities of phosphoenolpyruvate carboxylase and ribulose-1,5-bisphosphate carboxylase/oxygenase in leaves and fruit pericarp tissue of different coffee (Coffea sp.) genotypes
Photosynthetica
38
215-220
2000
Coffea arabica, Coffea eugenioides, Coffea congensis, Coffea canephora, Coffea stenophylla
-
Manually annotated by BRENDA team
Matt, P.; Krapp, A.; Haake, V.; Mock, H.P.; Stitt, M.
Decreased Rubisco activity leads to dramatic changes of nitrate metabolism, amino acid metabolism and the levels of phenylpropanoids and nicotine in tobacco antisense RBCS transformants
Plant J.
30
663-677
2002
Nicotiana tabacum
Manually annotated by BRENDA team
Whitney, S.M.; Von Caemmerer, S.; Hudson, G.S.; Andrews, T.J.
Directed mutation of the rubisco large subunit of tobacco influences photorespiration and growth
Plant Physiol.
121
579-588
1999
Nicotiana tabacum
Manually annotated by BRENDA team
Whitney, S.M.; Andrews, T.J.
Photosynthesis and growth of tobacco with a substituted bacterial Rubisco mirror the properties of the introduced enzyme
Plant Physiol.
133
287-294
2003
Nicotiana tabacum
Manually annotated by BRENDA team
Dolashka-Angelova, P.; Ali, S.A.; Demirevska-Kepova, K.; Stoeva, S.; Voelter, W.
Purification, characterization and thermostability of ribulose 1,5-bisphosphate carboxylase-oxygenase from barley leaves
Z. Naturforsch. C
55
611-619
2000
Hordeum vulgare
-
Manually annotated by BRENDA team
Selesi, D.; Schmid, M.; Hartmann, A.
Diversity of green-like and red-like ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes (cbbL) in differently managed agricultural soils
Appl. Environ. Microbiol.
71
175-184
2005
Cupriavidus necator, Azospirillum brasilense, Azospirillum lipoferum, Xanthobacter autotrophicus, Herbaspirillum seropedicae, Nitrobacter winogradskyi, Brucella anthropi, Ralstonia pickettii, Sinorhizobium fredii, Rhizobium leguminosarum, Sinorhizobium meliloti, Xanthobacter agilis, Sinorhizobium terangae, Sinorhizobium xinjiangense, Xanthobacter campestris, Nitrobacter vulgaris, Azospirillum doebereinerae, Brucella tritici
Manually annotated by BRENDA team
Karkehabadi, S.; Taylor, T.C.; Spreitzer, R.J.; Andersson, I.
Altered intersubunit interactions in crystal structures of catalytically compromised ribulose-1,5-bisphosphate carboxylase/oxygenase
Biochemistry
44
113-120
2005
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Karkehabadi, S.; Peddi, S.R.; Anwaruzzaman, M.; Taylor, T.C.; Cederlund, A.; Genkov, T.; Andersson, I.; Spreitzer, R.J.
Chimeric small subunits influence catalysis without causing global conformational changes in the crystal structure of ribulose-1,5-bisphosphate carboxylase/oxygenase
Biochemistry
44
9851-9861
2005
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Li, S.; Lu, W.; Li, G.F.; Gong, Y.D.; Zhao, N.M.; Zhang, R.X.; Zhou, H.M.
Interaction of hydrogen peroxide with ribulose-1,5-bisphosphate carboxylase/oxygenase from rice
Biochemistry (Moscow)
69
1136-1142
2004
Oryza sativa
Manually annotated by BRENDA team
Roh, K.S.; Choi, B.Y.
Sucrose regulates growth and activation of rubisco in tobacco leaves in vitro
Biotechnol. Bioprocess Eng.
9
229-235
2004
Nicotiana tabacum
-
Manually annotated by BRENDA team
Farias de Aragao, M.E.; Guedes, M.M.; Otoch, M.d.L.O.; Guedes, M.I.F.; Fernandes de Melo, D.; Lima, M.d.G.S.
Differential responses of ribulose-1,5-bisphosphate carboxylase/oxygenase activities of two Vigna unguiculata cultivars to salt stress
Braz. J. Plant Physiol.
17
207-212
2005
Vigna unguiculata
-
Manually annotated by BRENDA team
Perez, P.; Morcuende, R.; Martin del Molino, I.; Martinez-Carrasco, R.
Diurnal changes of Rubisco in response to elevated CO2, temperature and nitrogen in wheat grown under temperature gradient tunnels
Environ. Exp. Bot.
53
13-27
2005
Triticum aestivum
-
Manually annotated by BRENDA team
Kim, K.; Portis, A.R., Jr.
Oxygen-dependent H2O2 production by Rubisco
FEBS Lett.
571
124-128
2004
Chlamydomonas reinhardtii, Rhodospirillum rubrum, Spinacia oleracea
Manually annotated by BRENDA team
Marcus, Y.; Altman-Gueta, H.; Finkler, A.; Gurevitz, M.
Mutagenesis at two distinct phosphate-binding sites unravels their differential roles in regulation of Rubisco activation and catalysis
J. Bacteriol.
187
4222-4228
2005
Synechocystis sp.
Manually annotated by BRENDA team
Yosef, I.; Irihimovitch, V.; Knopf, J.A.; Cohen, I.; Orr-Dahan, I.; Nahum, E.; Keasar, C.; Shapira, M.
RNA binding activity of the ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit from Chlamydomonas reinhardtii
J. Biol. Chem.
279
10148-10156
2004
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Satagopan, S.; Spreitzer, R.J.
Substitutions at the Asp-473 latch residue of Chlamydomonas ribulose bisphosphate carboxylase/oxygenase cause decreases in carboxylation efficiency and CO(2)/O(2) specificity
J. Biol. Chem.
279
14240-14244
2004
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Smith, S.A.; Tabita, F.R.
Glycine 176 affects catalytic properties and stability of the Synechococcus sp. strain PCC6301 ribulose-1,5-bisphosphate carboxylase/oxygenase
J. Biol. Chem.
279
25632-25637
2004
Synechococcus sp., Synechococcus sp. PCC6301
Manually annotated by BRENDA team
Carvalho, L.C.; Esquivel, M.G.; Martins, I.; Ricardo, C.P.; Amancio, S.
Monitoring the stability of Rubisco in micropropagated grapevine (Vitis vinifera L.) by two-dimensional electrophoresis
J. Plant Physiol.
162
365-374
2005
Vitis vinifera
Manually annotated by BRENDA team
Schwender, J.; Goffman, F.; Ohlrogge, J.B.; Shachar-Hill, Y.
Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds
Nature
432
779-782
2004
Brassica napus
Manually annotated by BRENDA team
Anderson, L.E.; Carol, A.A.
Enzyme co-localization with rubisco in pea leaf chloroplasts
Photosynth. Res.
82
49-58
2004
Pisum sativum
Manually annotated by BRENDA team
Kim, K.; Portis, A.R., Jr.
Kinetic analysis of the slow inactivation of Rubisco during catalysis: effects of temperature, O2 and Mg2+
Photosynth. Res.
87
195-204
2006
Spinacia oleracea
Manually annotated by BRENDA team
Haldimann, P.; Feller, U.
Inhibition of photosynthesis by high temperature in oak (Quercus pubescens L.) leaves grown under natural conditions closely correlates with a reversible heat-dependent reduction of the activation state of ribulose-1,5-bisphosphate carboxylase/oxygenase
Plant Cell Environ.
27
1169-1183
2004
Quercus pubescens
-
Manually annotated by BRENDA team
Salvucci, M.E.; Crafts-Brandner, S.J.
Relationship between the heat tolerance of photosynthesis and the thermal stability of rubisco activase in plants from contrasting thermal environments
Plant Physiol.
134
1460-1470
2004
Deschampsia antarctica, Larrea tridentata
Manually annotated by BRENDA team
Cen, Y.P.; Sage, R.F.
The regulation of Rubisco activity in response to variation in temperature and atmospheric CO2 partial pressure in sweet potato
Plant Physiol.
139
979-990
2005
Ipomoea batatas
Manually annotated by BRENDA team
Spreitzer, R.J.; Peddi, S.R.; Satagopan, S.
Phylogenetic engineering at an interface between large and small subunits imparts land-plant kinetic properties to algal Rubisco
Proc. Natl. Acad. Sci. USA
102
17225-17230
2005
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Parikh, M.R.; Greene, D.N.; Woods, K.K.; Matsumura, I.
Directed evolution of RuBisCO hypermorphs through genetic selection in engineered E. coli
Protein Eng. Des. Sel.
19
113-119
2006
Synechococcus sp., Synechococcus sp. PCC 7942
Manually annotated by BRENDA team
Jin, S.; Hong, J.; Li, X.; Jiang, D.
Antisense inhibition of Rubisco activase increases Rubisco content and alters the proportion of Rubisco activase in stroma and thylakoids in chloroplasts of rice leaves
Ann. Bot.
97
739-744
2006
Oryza sativa
Manually annotated by BRENDA team
Yoshida, S.; Atomi, H.; Imanaka, T.
Engineering of a type III Rubisco from a hyperthermophilic archaeon in order to enhance catalytic performance in mesophilic host cells
Appl. Environ. Microbiol.
73
6254-6261
2007
Thermococcus kodakarensis
Manually annotated by BRENDA team
Liu, C.; Hong, F.S.; Wu, K.; Ma, H.B.; Zhang, X.G.; Hong, C.J.; Wu, C.; Gao, F.Q.; Yang, F.; Zheng, L.; Wang, X.F.; Liu, T.; Xie, Y.N.; Xu, J.H.; Li, Z.R.
Effect of Nd3+ ion on carboxylation activity of ribulose-1,5-bisphosphate carboxylase/oxygenase of spinach
Biochem. Biophys. Res. Commun.
342
36-43
2006
Spinacia oleracea
Manually annotated by BRENDA team
Karkehabadi, S.; Satagopan, S.; Taylor, T.C.; Spreitzer, R.J.; Andersson, I.
Structural analysis of altered large-subunit loop-6/carboxy-terminus interactions that influence catalytic efficiency and CO2/O2 specificity of ribulose-1,5-bisphosphate carboxylase/oxygenase
Biochemistry
46
11080-11089
2007
Chlamydomonas reinhardtii, Chlamydomonas reinhardtii 2137 mt+
Manually annotated by BRENDA team
Mueller-Cajar, O.; Morell, M.; Whitney, S.M.
Directed evolution of Rubisco in Escherichia coli reveals a specificity-determining hydrogen bond in the form II enzyme
Biochemistry
46
14067-14074
2007
Rhodospirillum rubrum (P04718), Rhodospirillum rubrum
Manually annotated by BRENDA team
Burisch, C.; Wildner, G.F.; Schlitter, J.
Bioinformatic tools uncover the C-terminal strand of Rubiscos large subunit as hot-spot for specificity-enhancing mutations
FEBS Lett.
581
741-748
2007
Synechococcus sp., Synechococcus sp. PCC6301
Manually annotated by BRENDA team
Kreel, N.E.; Tabita, F.R.
Substitutions at methionine 295 of Archaeoglobus fulgidus ribulose-1,5-bisphosphate carboxylase/oxygenase affect oxygen binding and CO2/O2 specificity
J. Biol. Chem.
282
1341-1351
2007
Archaeoglobus fulgidus
Manually annotated by BRENDA team
Galmes, J.; Medrano, H.; Flexas, J.
Acclimation of Rubisco specificity factor to drought in tobacco: discrepancies between in vitro and in vivo estimations
J. Exp. Bot.
57
3659-3667
2006
Nicotiana tabacum
Manually annotated by BRENDA team
McNevin, D.; von Caemmerer, S.; Farquhar, G.
Determining RuBisCO activation kinetics and other rate and equilibrium constants by simultaneous multiple non-linear regression of a kinetic model
J. Exp. Bot.
57
3883-3900
2006
Spinacia oleracea
Manually annotated by BRENDA team
Caldwell, P.E.; MacLean, M.R.; Norris, P.R.
Ribulose bisphosphate carboxylase activity and a Calvin cycle gene cluster in Sulfobacillus species
Microbiology
153
2231-2240
2007
Acidithiobacillus ferrooxidans, Sulfobacillus acidophilus, Sulfobacillus thermosulfidooxidans, Sulfobacillus thermosulfidooxidans BC1
Manually annotated by BRENDA team
Flexas, J.; Ribas-Carbo, M.; Bota, J.; Galmes, J.; Henkle, M.; Martinez-Canellas, S.; Medrano, H.
Decreased Rubisco activity during water stress is not induced by decreased relative water content but related to conditions of low stomatal conductance and chloroplast CO2 concentration
New Phytol.
172
73-82
2006
Glycine max, Nicotiana tabacum
Manually annotated by BRENDA team
Snir, A.; Gurevitz, M.; Marcus, Y.
Alterations in Rubisco activity and in stomatal behavior induce a daily rhythm in photosynthesis of aerial leaves in the amphibious-plant Nuphar lutea
Photosynth. Res.
90
233-242
2006
Nuphar lutea
Manually annotated by BRENDA team
Pandey, D.M.; Kim, J.; Lee, W.; Yeo, U.
Changes in contents of photosynthetic pigments and ribulose-1,5-bisphosphate carboxylase activity during the development of globular somatic embryo into the plantlet of Siberian ginseng
Photosynthetica
44
221-226
2006
Eleutherococcus senticosus
-
Manually annotated by BRENDA team
Wu, H.R.; Li, L.B.; Jing, Y.X.; Kuang, T.Y.
Over-and anti-sense expressions of the large isoform of ribulose-1,5-bisphosphate carboxylase/oxygenase activase gene in Oryza sativa affect the photosynthetic capacity
Photosynthetica
45
194-201
2007
Oryza sativa
-
Manually annotated by BRENDA team
Yamori, W.; Suzuki, K.; Noguchi, K.; Nakai, M.; Terashima, I.
Effects of Rubisco kinetics and Rubisco activation state on the temperature dependence of the photosynthetic rate in spinach leaves from contrasting growth temperatures
Plant Cell Environ.
29
1659-1670
2006
Spinacia oleracea
Manually annotated by BRENDA team
Sharwood, R.E.; von Caemmerer, S.; Maliga, P.; Whitney, S.M.
The catalytic properties of hybrid Rubisco comprising tobacco small and sunflower large subunits mirror the kinetically equivalent source rubiscos and can support tobacco growth
Plant Physiol.
146
83-96
2008
Helianthus annuus (P45738)
Manually annotated by BRENDA team
Tcherkez, G.G.; Farquhar, G.D.; Andrews, T.J.
Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized
Proc. Natl. Acad. Sci. USA
103
7246-7251
2006
Allochromatium vinosum, Amaranthus hybridus, Trichormus variabilis, Chlamydomonas reinhardtii, Euglena gracilis, Galdieria sulphuraria, Nicotiana tabacum, Oryza sativa, Phaeodactylum tricornutum, Rhodospirillum rubrum, Sorghum bicolor, Spinacia oleracea, Synechococcus sp., Triticum aestivum, Zea mays, Griffithsia monilis, Atriplex glabriuscula, Synechococcus sp. 6301, Synechococcus sp. 7002
Manually annotated by BRENDA team
Zhang, C.; Chen, L.; Shi, D.; Chen, G.; Lu, C.; Wang, P.; Wang, J.; Chu, H.; Zhou, Q.; Zuo, M.; Sun, L.
Characteristics of ribulose-1,5-bisphosphate carboxylase and C4 pathway key enzymes in flag leaves of a super-high-yield hybrid rice and its parents during the reproductive stage
S. Afr. J. Bot.
73
22-28
2007
Oryza sativa
-
Manually annotated by BRENDA team
Xuming, W.; Fengqing, G.; Linglan, M.; Jie, L.; Sitao, Y.; Ping, Y.; Fashui, H.
Effects of nano-anatase on ribulose-1, 5-bisphosphate carboxylase/oxygenase mRNA expression in spinach
Biol. Trace Elem. Res.
126
280-289
2008
Spinacia oleracea
Manually annotated by BRENDA team
Abat, J.K.; Mattoo, A.K.; Deswal, R.
S-nitrosylated proteins of a medicinal CAM plant Kalanchoe pinnata ribulose-1,5-bisphosphate carboxylase/oxygenase activity targeted for inhibition
FEBS J.
275
2862-2872
2008
Kalanchoe pinnata (I1UMG7), Kalanchoe pinnata
Manually annotated by BRENDA team
Rinke, C.; Schmitz-Esser, S.; Loy, A.; Horn, M.; Wagner, M.; Bright, M.
High genetic similarity between two geographically distinct strains of the sulfur-oxidizing symbiont Candidatus Thiobios zoothamnicoli
FEMS Microbiol. Ecol.
67
229-241
2009
Candidatus Thiobios zoothamnicoli (B8QCU8)
Manually annotated by BRENDA team
Dou, Z.; Heinhorst, S.; Williams, E.B.; Murin, C.D.; Shively, J.M.; Cannon, G.C.
CO2 fixation kinetics of Halothiobacillus neapolitanus mutant carboxysomes lacking carbonic anhydrase suggest the shell acts as a diffusional barrier for CO2
J. Biol. Chem.
283
10377-10384
2008
Halothiobacillus neapolitanus (O85040 and P45686), Halothiobacillus neapolitanus
Manually annotated by BRENDA team
Ashida, H.; Saito, Y.; Nakano, T.; Tandeau de Marsac, N.; Sekowska, A.; Danchin, A.; Yokota, A.
RuBisCO-like proteins as the enolase enzyme in the methionine salvage pathway: functional and evolutionary relationships between RuBisCO-like proteins and photosynthetic RuBisCO
J. Exp. Bot.
59
1543-1554
2008
Bacillus subtilis
Manually annotated by BRENDA team
Andersson, I.
Catalysis and regulation in Rubisco
J. Exp. Bot.
59
1555-1568
2008
Bacteria, Embryophyta, cyanobacterium
Manually annotated by BRENDA team
Prins, A.; van Heerden, P.D.; Olmos, E.; Kunert, K.J.; Foyer, C.H.
Cysteine proteinases regulate chloroplast protein content and composition in tobacco leaves: a model for dynamic interactions with ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) vesicular bodies
J. Exp. Bot.
59
1935-1950
2008
Nicotiana tabacum
Manually annotated by BRENDA team
Dunbar, M.; Murphy, T.M.
DNA analysis of natural fiber rope
J. Forensic Sci.
54
108-113
2009
Agave sisalana, Cannabis sativa, Corchorus olitorius, Linum usitatissimum, Musa cavendishii
Manually annotated by BRENDA team
Cho, J.; Hwang, H.; Cho, M.; Kwon, Y.; Jeon, J.; Bhoo, S.H.; Hahn, T.
The effect of DTT in protein preparations for proteomic analysis: Removal of a highly abundant plant enzyme, ribulose bisphosphate carboxylase/oxygenase
J. Plant Biol.
51
297-301
2008
Oryza sativa
-
Manually annotated by BRENDA team
Alabi, O.J.; Kumar, P.L.; Naidu, R.A.
Multiplex PCR for the detection of African cassava mosaic virus and East African cassava mosaic Cameroon virus in cassava
J. Virol. Methods
154
111-120
2008
Manihot esculenta
Manually annotated by BRENDA team
Sorensen, B.; Jones, J.F.; Vernon, S.D.; Rajeevan, M.S.
Transcriptional control of complement activation in an exercise model of chronic fatigue syndrome
Mol. Med.
15
34-42
2009
Arabidopsis thaliana (O03042)
Manually annotated by BRENDA team
David-Schwartz, R.; Runo, S.; Townsley, B.; Machuka, J.; Sinha, N.
Long-distance transport of mRNA via parenchyma cells and phloem across the host-parasite junction in Cuscuta
New Phytol.
179
1133-1141
2008
Medicago sativa (Q65194), Solanum lycopersicum
Manually annotated by BRENDA team
Gubernator, B.; Bartoszewski, R.; Kroliczewski, J.; Wildner, G.; Szczepaniak, A.
Ribulose-1,5-bisphosphate carboxylase/oxygenase from thermophilic cyanobacterium Thermosynechococcus elongatus
Photosynth. Res.
95
101-109
2008
Thermosynechococcus vestitus
Manually annotated by BRENDA team
Bhatti, S.; Colman, B.
Inorganic carbon acquisition in some synurophyte algae
Physiol. Plant.
133
33-40
2008
Synura petersenii, Synura uvella, Mallomonas papillosa
Manually annotated by BRENDA team
Bagard, M.; Le Thiec, D.; Delacote, E.; Hasenfratz-Sauder, M.P.; Banvoy, J.; Gerard, J.; Dizengremel, P.; Jolivet, Y.
Ozone-induced changes in photosynthesis and photorespiration of hybrid poplar in relation to the developmental stage of the leaves
Physiol. Plant.
134
559-574
2008
Populus tremula x Populus alba
Manually annotated by BRENDA team
Alonso, A.; Perez, P.; Martinez-Carrasco, R.
Growth in elevated CO enhances temperature response of photosynthesis in wheat
Physiol. Plant.
135
109-120
2009
Triticum aestivum
Manually annotated by BRENDA team
Carmo-Silva, A.E.; Powers, S.J.; Keys, A.J.; Arrabaca, M.C.; Parry, M.A.
Photorespiration in C4 grasses remains slow under drought conditions
Plant Cell Environ.
31
925-940
2008
Cynodon dactylon, Paspalum dilatatum, Zoysia japonica
Manually annotated by BRENDA team
Ichikawa, K.; Miyake, C.; Iwano, M.; Sekine, M.; Shinmyo, A.; Kato, K.
Ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit translation is regulated in a small subunit-independent manner in the expanded leaves of tobacco
Plant Cell Physiol.
49
214-225
2008
Nicotiana tabacum (P69249), Nicotiana tabacum
Manually annotated by BRENDA team
Cruz, J.A.; Emery, C.; Wuest, M.; Kramer, D.M.; Lange, B.M.
Metabolite profiling of Calvin cycle intermediates by HPLC-MS using mixed-mode stationary phases
Plant J.
55
1047-1060
2008
Nicotiana tabacum
Manually annotated by BRENDA team
Ahsan, N.; Lee, D.G.; Lee, K.W.; Alam, I.; Lee, S.H.; Bahk, J.D.; Lee, B.H.
Glyphosate-induced oxidative stress in rice leaves revealed by proteomic approach
Plant Physiol. Biochem.
46
1062-1070
2008
Oryza sativa (Q5K3B1 and Q2QTJ7), Oryza sativa
Manually annotated by BRENDA team
Andersson, I.; Backlund, A.
Structure and function of Rubisco
Plant Physiol. Biochem.
46
275-291
2008
Cupriavidus necator, Chlorobaculum tepidum, Galdieria partita, Nicotiana tabacum, Thermococcus kodakarensis, Rhodopseudomonas palustris, Synechococcus sp., Halothiobacillus neapolitanus, Geobacillus kaustophilus, Spinacia oleracea (O20253), Pyrococcus horikoshii (O58677), Rhodospirillum rubrum (P04718), Chlamydomonas reinhardtii (P08475), Oryza sativa (Q0INY7)
Manually annotated by BRENDA team
Uniacke, J.; Zerges, W.
Chloroplast protein targeting involves localized translation in Chlamydomonas
Proc. Natl. Acad. Sci. USA
106
1439-1444
2009
Chlamydomonas reinhardtii (P08475), Chlamydomonas reinhardtii CC-503 (P08475)
Manually annotated by BRENDA team
Tanaka, S.; Sawaya, M.R.; Phillips, M.; Yeates, T.O.
Insights from multiple structures of the shell proteins from the beta-carboxysome
Protein Sci.
18
108-120
2009
Synechocystis sp. PCC 6803
Manually annotated by BRENDA team
Park, S.W.; Hwang, E.H.; Jang, H.S.; Lee, J.H.; Kang, B.S.; Oh, J.I.; Kim, Y.M.
Presence of duplicate genes encoding a phylogenetically new subgroup of form I ribulose 1,5-bisphosphate carboxylase/oxygenase in Mycobacterium sp. strain JC1 DSM 3803
Res. Microbiol.
160
159-165
2009
Mycobacterium sp. (A8C9T6 and A8C9T7), Mycobacterium sp. (A8C9T8 and A8C9T9), Mycobacterium sp., Mycobacterium sp. DSM 3803 / JC1 (A8C9T6 and A8C9T7), Mycobacterium sp. DSM 3803 / JC1 (A8C9T8 and A8C9T9)
Manually annotated by BRENDA team
Swingley, W.D.; Sadekar, S.; Mastrian, S.D.; Matthies, H.J.; Hao J.; Ramos, H.; Acharya, C.R.; Conrad, A.L.; Taylor, H.L.; Dejesa, L.C.; Shah, M.K.; O'huallachain, M.E.; Lince, M.T.; Blankenship, R.E.; Beatty, J.T.; Touchman, J.W.
The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism
J. Bacteriol.
189
683-690
2007
no activity in Roseobacter denitrificans OCh 114
Manually annotated by BRENDA team
Witte, B.; John, D.; Wawrik, B.; Paul, J.H.; Dayan, D.; Tabita, F.R.
Functional prokaryotic RubisCO from an oceanic metagenomic library
Appl. Environ. Microbiol.
76
2997-3003
2010
Synechococcus sp., Synechococcus (Q0QKD8)
Manually annotated by BRENDA team
Liggins, J.R.; Gready, J.E.
Putative functional role for the invariant aspartate 263 residue of Rhodospirillum rubrum Rubisco
Biochemistry
48
2226-2236
2009
Rhodospirillum rubrum (P04718), Rhodospirillum rubrum
Manually annotated by BRENDA team
Satagopan, S.; Scott, S.S.; Smith, T.G.; Tabita, F.R.
A Rubisco mutant that confers growth under a normally "inhibitory" oxygen concentration
Biochemistry
48
9076-9083
2009
Synechococcus
Manually annotated by BRENDA team
Muto, M.; Henry, R.E.; Mayfield, S.P.
Accumulation and processing of a recombinant protein designed as a cleavable fusion to the endogenous Rubisco LSU protein in Chlamydomonas chloroplast
BMC Biotechnol.
9
26
2009
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Jiang, H.; Tang, N.; Zheng, J.; Chen, L.
Antagonistic actions of boron against inhibitory effects of aluminum toxicity on growth, CO2 assimilation, ribulose-1,5-bisphosphate carboxylase/oxygenase, and photosynthetic electron transport probed by the JIP-test, of Citrus grandis seedling
BMC Plant Biol.
9
102
2009
Citrus maxima
Manually annotated by BRENDA team
Witzel, F.; Goetze, J.; Ebenhoeh, O.
Slow deactivation of ribulose 1,5-bisphosphate carboxylase/oxygenase elucidated by mathematical models
FEBS J.
277
931-950
2010
Galdieria sulphuraria, Nicotiana tabacum, Phaeodactylum tricornutum, Rhodospirillum rubrum, Synechococcus sp., Griffithsia monilis
Manually annotated by BRENDA team
Joshi, G.S.; Romagnoli, S.; Verberkmoes, N.C.; Hettich, R.L.; Pelletier, D.; Tabita, F.R.
Differential accumulation of form I RubisCO in Rhodopseudomonas palustris CGA010 under Photoheterotrophic growth conditions with reduced carbon sources
J. Bacteriol.
191
4243-4250
2009
Rhodopseudomonas palustris
Manually annotated by BRENDA team
Genkov, T.; Spreitzer, R.J.
Highly conserved small subunit residues influence rubisco large subunit catalysis
J. Biol. Chem.
284
30105-30112
2009
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Alonso, H.; Blayney, M.J.; Beck, J.L.; Whitney, S.M.
Substrate-induced assembly of Methanococcoides burtonii D-ribulose-1,5-bisphosphate carboxylase/oxygenase dimers into decamers
J. Biol. Chem.
284
33876-33882
2009
Methanococcoides burtonii
Manually annotated by BRENDA team
Carmo-Silva, A.E.; Keys, A.J.; Andralojc, P.J.; Powers, S.J.; Arrabaca, M.C.; Parry, M.A.
Rubisco activities, properties, and regulation in three different C4 grasses under drought
J. Exp. Bot.
61
2355-2366
2010
Paspalum dilatatum (B0B744), Paspalum dilatatum, Zoysia japonica (B0B758), Zoysia japonica, Cynodon dactylon (B0B766), Cynodon dactylon
Manually annotated by BRENDA team
Huang, X.; Bie, Z.
Cinnamic acid-inhibited ribulose-1,5-bisphosphate carboxylase activity is mediated through decreased spermine and changes in the ratio of polyamines in cowpea
J. Plant Physiol.
167
47-53
2010
Vigna unguiculata
Manually annotated by BRENDA team
Katam, R.; Basha, S.M.; Suravajhala, P.; Pechan, T.
Analysis of Peanut Leaf Proteome
J. Proteome Res.
9
2236-2254
2010
Arachis hypogaea
Manually annotated by BRENDA team
Martin, K.C.; Bruhn, D.; Lovelock, C.E.; Feller, I.C.; Evans, J.R.; Ball, M.C.
Nitrogen fertilization enhances water-use efficiency in a saline environment
Plant Cell Environ.
33
344-357
2010
Avicennia marina (Q6JX17)
Manually annotated by BRENDA team
Cousins, A.B.; Ghannoum, O.; Von Caemmerer, S.; Badger, M.R.
Simultaneous determination of Rubisco carboxylase and oxygenase kinetic parameters in Triticum aestivum and Zea mays using membrane inlet mass spectrometry
Plant Cell Environ.
33
444-452
2010
Triticum aestivum, Zea mays
Manually annotated by BRENDA team
Lilley, R.M.; Ralph, P.J.; Larkum, A.W.
The Determination of Activity of the Enzyme Rubisco in Cell Extracts of the Dinoflagellate Alga Symbiodinium sp. by Manganese Chemiluminescence and its Response to Short-term Thermal Stress of the Alga
Plant Cell Environ.
33
995-1004
2010
Symbiodinium sp. (Q41406), Symbiodinium sp.
Manually annotated by BRENDA team
Johnson, X.; Wostrikoff, K.; Finazzi, G.; Kuras, R.; Schwarz, C.; Bujaldon, S.; Nickelsen, J.; Stern, D.B.; Wollman, F.A.; Vallon, O.
MRL1, a conserved Pentatricopeptide repeat protein, is required for stabilization of rbcL mRNA in Chlamydomonas and Arabidopsis
Plant Cell
22
234-248
2010
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Whitney, S.M.; Kane, H.J.; Houtz, R.L.; Sharwood, R.E.
Rubisco oligomers composed of linked small and large subunits assemble in tobacco plastids and have higher affinities for CO2 and O2
Plant Physiol.
149
1887-1895
2009
Nicotiana tabacum
Manually annotated by BRENDA team
Yin, Z.; Meng, F.; Song, H.; Wang, X.; Xu, X.; Yu, D.
Expression quantitative trait loci analysis of two genes encoding rubisco activase in soybean
Plant Physiol.
152
1625-1637
2010
Glycine max
Manually annotated by BRENDA team
Xia, X.J.; Huang, L.F.; Zhou, Y.H.; Mao, W.H.; Shi, K.; Wu, J.X.; Asami, T.; Chen, Z.; Yu, J.Q.
Brassinosteroids promote photosynthesis and growth by enhancing activation of Rubisco and expression of photosynthetic genes in Cucumis sativus
Planta
230
1185-1196
2009
Cucumis sativus
Manually annotated by BRENDA team
Raunser, S.; Magnani, R.; Huang, Z.; Houtz, R.L.; Trievel, R.C.; Penczek, P.A.; Walz, T.
Rubisco in complex with Rubisco large subunit methyltransferase
Proc. Natl. Acad. Sci. USA
106
3160-3165
2009
Nicotiana tabacum, Spinacia oleracea
Manually annotated by BRENDA team
Abat, J.K.; Deswal, R.
Differential modulation of S-nitrosoproteome of Brassica juncea by low temperature: change in S-nitrosylation of Rubisco is responsible for the inactivation of its carboxylase activity
Proteomics
9
4368-4380
2009
Brassica juncea (Q6Y9Y8), Brassica juncea
Manually annotated by BRENDA team
Hozain, M.I.; Salvucci, M.E.; Fokar, M.; Holaday, A.S.
The differential response of photosynthesis to high temperature for a boreal and temperate Populus species relates to differences in Rubisco activation and Rubisco activase properties
Tree Physiol.
30
32-44
2010
Populus deltoides, Populus balsamifera
Manually annotated by BRENDA team
Hao, J.; Liu, L.; Yu, Y.; Zhou, R.
The influence of HCO3-, K+ and HSO3- on RUBISCO large-subunit (rbcL) and small-subunit (rbcS) genes expression
Afr. J. Agricult. Res.
6
2280-2284
2011
Cucumis sativus
-
Manually annotated by BRENDA team
Nakano, T.; Ashida, H.; Mizohata, E.; Matsumura, H.; Yokota, A.
An evolutionally conserved Lys122 is essential for function in Rhodospirillum rubrum bona fide RuBisCO and Bacillus subtilis RuBisCO-like protein
Biochem. Biophys. Res. Commun.
392
212-216
2010
Rhodospirillum rubrum
Manually annotated by BRENDA team
Liu, C.; Hong, F.S.; Tao, Y.; Liu, T.; Xie, Y.N.; Xu, J.H.; Li, Z.R.
The mechanism of the molecular interaction between cerium (III) and ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco)
Biol. Trace Elem. Res.
143
1110-1120
2011
Spinacia oleracea
Manually annotated by BRENDA team
Singh, J.; Tabita, F.
Roles of RubisCO and the RubisCO-like protein in 5-methylthioadenosine metabolism in the nonsulfur purple bacterium Rhodospirillum rubrum
J. Bacteriol.
192
1324-1331
2010
Rhodospirillum rubrum, Rhodospirillum rubrum Str-2
Manually annotated by BRENDA team
Genkov, T.; Meyer, M.; Griffiths, H.; Spreitzer, R.J.
Functional hybrid Rubisco enzymes with plant small subunits and algal large subunits: engineered rbcS cDNA for expression in Chlamydomonas
J. Biol. Chem.
285
19833-19841
2010
Arabidopsis thaliana, Chlamydomonas reinhardtii, Helianthus annuus, Spinacia oleracea
Manually annotated by BRENDA team
Nishitani, Y.; Yoshida, S.; Fujihashi, M.; Kitagawa, K.; Doi, T.; Atomi, H.; Imanaka, T.; Miki, K.
Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J. Biol. Chem.
285
39339-39347
2010
Thermococcus kodakarensis (O93627), Thermococcus kodakarensis
Manually annotated by BRENDA team
Marcus, Y.; Altman-Gueta, H.; Wolff, Y.; Gurevitz, M.
Rubisco mutagenesis provides new insight into limitations on photosynthesis and growth in Synechocystis PCC6803
J. Exp. Bot.
62
4173-4182
2011
Synechocystis sp.
Manually annotated by BRENDA team
Galmes, J.; Ribas-Carbo, M.; Medrano, H.; Flexas, J.
Rubisco activity in Mediterranean species is regulated by the chloroplastic CO2 concentration under water stress
J. Exp. Bot.
62
653-665
2011
Diplotaxis ibicensis, Pistacia lentiscus, Hypericum balearicum, Limonium gibertii, Limonium magallufianum, Malva wigandii, Phlomis italica, Cistus albidus, Beta vulgaris subsp. maritima
Manually annotated by BRENDA team
Carmo-Silva, A.E.; Barta, C.; Salvucci, M.E.
Isolation of ribulose-1,5-bisphosphate carboxylase/oxygenase from leaves
Methods Mol. Biol.
684
339-347
2011
Arabidopsis thaliana, Chlamydomonas sp., Nicotiana tabacum, Spinacia oleracea, Xanthium sp.
Manually annotated by BRENDA team
Kapralov, M.V.; Kubien, D.S.; Andersson, I.; Filatov, D.A.
Changes in Rubisco kinetics during the evolution of C4 photosynthesis in Flaveria (Asteraceae) are associated with positive selection on genes encoding the enzyme
Mol. Biol. Evol.
28
1491-1503
2011
Flaveria bidentis, Flaveria chlorifolia, Flaveria cronquistii, Flaveria floridana, Flaveria pringlei, Flaveria trinervia, Flaveria linearis, Flaveria angustifolia, Flaveria kochiana, Flaveria vaginata, Flaveria ramosissima, Flaveria palmeri, Flaveria anomala, Flaveria sonorensis
Manually annotated by BRENDA team
Espie, G.S.; Kimber, M.S.
Carboxysomes: cyanobacterial RubisCO comes in small packages
Photosynth. Res.
109
7-20
2011
Synechocystis sp., Prochlorococcus marinus, Synechococcus sp., Halothiobacillus neapolitanus, Synechococcus sp. PCC 7942, Prochlorococcus marinus MED4
Manually annotated by BRENDA team
Suzuki, Y.; Kihara-Doi, T.; Kawazu, T.; Miyake, C.; Makino, A.
Differences in Rubisco content and its synthesis in leaves at different positions in Eucalyptus globulus seedlings
Plant Cell Environ.
33
1314-1323
2010
Eucalyptus globulus subsp. globulus
Manually annotated by BRENDA team
Perez, P.; Alonso, A.; Zita, G.; Morcuende, R.; Martinez-Carrasco, R.
Down-regulation of Rubisco activity under combined increases of CO2 and temperature minimized by changes in Rubisco kcat in wheat
Plant Growth Regul.
65
439-447
2011
Triticum aestivum
-
Manually annotated by BRENDA team
Hirakawa, Y.; Ishida, K.
Internal plastid-targeting signal found in a RubisCO small subunit protein of a chlorarachniophyte alga
Plant J.
64
402-410
2010
Amorphochlora amoebiformis (B3TFG8)
Manually annotated by BRENDA team
Whitney, S.; Houtz, R.; Alonso, H.
Advancing our understanding and capacity to engineer natures CO2-sequestering enzyme, Rubisco
Plant Physiol.
155
27-35
2011
Pyrococcus horikoshii (O58677), Thermococcus kodakarensis (O93627), Spinacia oleracea (P00870), Spinacia oleracea (P00875), Rhodospirillum rubrum (P04718)
Manually annotated by BRENDA team
Ishikawa, C.; Hatanaka, T.; Misoo, S.; Miyake, C.; Fukayama, H.
Functional incorporation of Sorghum small subunit increases the catalytic turnover rate of Rubisco in transgenic rice
Plant Physiol.
156
1603-1611
2011
Sorghum bicolor
Manually annotated by BRENDA team
Wang, C.; Fan, X.; Wang, G.; Niu, J.; Zhou, B.
Differential expression of Rubisco in sporophytes and gametophytes of some marine macroalgae
PLoS ONE
6
e16351
2011
Saccharina japonica, Neopyropia yezoensis, Neoporphyra haitanensis, Bangia fuscopurpurea
Manually annotated by BRENDA team
Gourion, B.; Delmotte, N.; Bonaldi, K.; Nouwen, N.; Vorholt, J.A.; Giraud, E.
Bacterial RuBisCO is required for efficient Bradyrhizobium/Aeschynomene symbiosis
PLoS ONE
6
e21900
2011
Bradyrhizobium sp., Bradyrhizobium sp. ORS278
Manually annotated by BRENDA team
Lin, L.; Luo, Z.; Yan, F.; Lu, Y.; Zheng, H.; Chen, J.
Interaction between potyvirus P3 and ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) of host plants
Virus Genes
43
90-92
2011
Allium cepa (A8DY18), Allium cepa
Manually annotated by BRENDA team
Marin-Navarro, J.; Esquivel, M.; Moreno, J.
Hydrogen production by Chlamydomonas reinhardtii revisited: Rubisco as a biotechnological target
World J. Microbiol. Biotechnol.
26
1785-1793
2010
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Finn, M.W.; Tabita, F.R.
Synthesis of catalytically active form III ribulose 1,5-bisphosphate carboxylase/oxygenase in archaea
J. Bacteriol.
185
3049-3059
2003
Archaeoglobus fulgidus (O28635), Archaeoglobus fulgidus, Methanocaldococcus jannaschii (Q58632), Methanocaldococcus jannaschii, Methanosarcina acetivorans (Q8THG2), Methanosarcina acetivorans, Methanocaldococcus jannaschii DSM 2661 (Q58632), Methanosarcina acetivorans DSM 2834 (Q8THG2)
Manually annotated by BRENDA team
Loewen, P.C.; Didychuk, A.L.; Switala, J.; Perez-Luque, R.; Fita, I.; Loewen, M.C.
Structure of Pisum sativum Rubisco with bound ribulose 1,5-bisphosphate
Acta Crystallogr. Sect. F
69
10-14
2013
Pisum sativum (P04717 and P07689), Pisum sativum
Manually annotated by BRENDA team
Pinto, T.S.; Malcata, F.X.; Arrabaca, J.D.; Silva, J.M.; Spreitzer, R.J.; Esquivel, M.G.
Rubisco mutants of Chlamydomonas reinhardtii enhance photosynthetic hydrogen production
Appl. Microbiol. Biotechnol.
97
5635-5643
2013
Chlamydomonas reinhardtii
Manually annotated by BRENDA team
Bhardwaj, U.; Bhardwaj, A.; Kumar, R.; Leelavathi, S.; Reddy, V.S.; Mazumdar-Leighton, S.
Revisiting rubisco as a protein substrate for insect midgut proteases
Arch. Insect Biochem. Physiol.
85
13-35
2014
Antheraea assamensis, Brassica oleracea (A8D0J3), Helicoverpa armigera, Litsea monopetala (A8D0I8), Litsea monopetala, Machilus bombycina (A8D0I2), Machilus bombycina, Nicotiana tabacum, Pieris brassicae
Manually annotated by BRENDA team
van Lun, M.; Hub, J.S.; van der Spoel, D.; Andersson, I.
CO2 and O2 distribution in Rubisco suggests the small subunit functions as a CO2 reservoir
J. Am. Chem. Soc.
136
3165-3171
2014
Spinacia oleracea (P00870)
Manually annotated by BRENDA team
Parry, M.A.; Andralojc, P.J.; Scales, J.C.; Salvucci, M.E.; Carmo-Silva, A.E.; Alonso, H.; Whitney, S.M.
Rubisco activity and regulation as targets for crop improvement
J. Exp. Bot.
64
717-730
2013
Camelina sativa, Gossypium hirsutum, Nicotiana tabacum
Manually annotated by BRENDA team
Matsumura, H.; Mizohata, E.; Ishida, H.; Kogami, A.; Ueno, T.; Makino, A.; Inoue, T.; Yokota, A.; Mae, T.; Kai, Y.
Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J. Mol. Biol.
422
75-86
2012
Oryza sativa (P0C512 and Q0INY7), Oryza sativa
Manually annotated by BRENDA team
Miller, S.R.; McGuirl, M.A.; Carvey, D.
The evolution of RuBisCO stability at the thermal limit of photoautotrophy
Mol. Biol. Evol.
30
752-760
2013
Synechococcus sp., Synechococcus sp. OH28
Manually annotated by BRENDA team
Scafaro, A.P.; Yamori, W.; Carmo-Silva, A.E.; Salvucci, M.E.; von Caemmerer, S.; Atwell, B.J.
Rubisco activity is associated with photosynthetic thermotolerance in a wild rice (Oryza meridionalis)
Physiol. Plant.
146
99-109
2012
Oryza meridionalis
Manually annotated by BRENDA team
Davies, B.N.; Griffiths, H.
Competing carboxylases: circadian and metabolic regulation of Rubisco in C3 and CAM Mesembryanthemum crystallinum L.
Plant Cell Environ.
35
1211-1220
2012
Mesembryanthemum crystallinum
Manually annotated by BRENDA team
Allen, D.K.; Laclair, R.W.; Ohlrogge, J.B.; Shachar-Hill, Y.
Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments
Plant Cell Environ.
35
1232-1244
2012
Brassica napus
Manually annotated by BRENDA team
Walker, B.; Ariza, L.S.; Kaines, S.; Badger, M.R.; Cousins, A.B.
Temperature response of in vivo Rubisco kinetics and mesophyll conductance in Arabidopsis thaliana: comparisons to Nicotiana tabacum
Plant Cell Environ.
36
2108-2119
2013
Arabidopsis thaliana, Nicotiana tabacum
Manually annotated by BRENDA team
Galmes, J.; Kapralov, M.V.; Andralojc, P.J.; Conesa, M.A.; Keys, A.J.; Parry, M.A.; Flexas, J.
Expanding knowledge of the Rubisco kinetics variability in plant species: environmental and evolutionary trends
Plant Cell Environ.
37
1989-2001
2014
Arabidopsis thaliana, Atrichum undulatum, Dactylis glomerata, Drosera capensis, Marchantia polymorpha, Metasequoia glyptostroboides, Pteridium aquilinum, Triticum aestivum, Trachycarpus fortunei, Ceratophyllum demersum, Platycerium superbum, Cycas panzhihuaensis, Nymphaea alba, Agave victoriae-reginae, Carpobrotus edulis, Echeveria elegans, Drosera venusta, Sarracenia flava, Eucalyptus moorei, Eucalyptus neglecta, Iris douglasiana, Crithmum maritimum, Limonium latibracteatum, Limonium stenophyllum, Limonium virgatum, Pallenis maritima, Sideritis cretica subsp. spicata, Teucrium heterophyllum
Manually annotated by BRENDA team
Morita, K.; Hatanaka, T.; Misoo, S.; Fukayama, H.
Unusual small subunit that is not expressed in photosynthetic cells alters the catalytic properties of Rubisco in rice
Plant Physiol.
164
69-79
2014
Oryza sativa
Manually annotated by BRENDA team
Galmes, J.; Conesa, M.; Diaz-Espejo, A.; Mir, A.; Perdomo, J.; Niinemets, U.; Flexas, J.
Rubisco catalytic properties optimized for present and future climatic conditions
Plant Sci.
226
61-70
2014
Nicotiana tabacum, Triticum aestivum, Limonium gibertii
Manually annotated by BRENDA team
Stec, B.
Structural mechanism of RuBisCO activation by carbamylation of the active site lysine
Proc. Natl. Acad. Sci. USA
109
18785-18790
2012
Galdieria sulphuraria (P23755), Galdieria sulphuraria
Manually annotated by BRENDA team
Studer, R.A.; Christin, P.A.; Williams, M.A.; Orengo, C.A.
Stability-activity tradeoffs constrain the adaptive evolution of RubisCO
Proc. Natl. Acad. Sci. USA
111
2223-2228
2014
Oryza sativa
Manually annotated by BRENDA team
Kreel, N.E.; Tabita, F.R.
Serine 363 of a hydrophobic region of archaeal ribulose 1,5-bisphosphate carboxylase/oxygenase from Archaeoglobus fulgidus and Thermococcus kodakaraensis affects CO2/O2 substrate specificity and oxygen sensitivity
PLoS One
10
e0138351
2015
Archaeoglobus fulgidus (O28635), Archaeoglobus fulgidus, Thermococcus kodakarensis (O93627), Thermococcus kodakarensis, Thermococcus kodakarensis ATCC BAA-918 (O93627)
Manually annotated by BRENDA team
Boller, A.; Thomas, P.; Cavanaugh, C.; Scott, K.
Isotopic discrimination and kinetic parameters of RubisCO from the marine bloom-forming diatom, Skeletonema costatum
Geobiology
13
33-43
2015
Skeletonema costatum (A0A097IV41), Skeletonema costatum
Manually annotated by BRENDA team
Martin, A.; Nieuwland, M.; De Jong, G.
Characterization of heat-set gels from RuBisCO in comparison to those from other proteins
J. Agric. Food Chem.
62
10783-10791
2014
Spinacia oleracea
-
Manually annotated by BRENDA team
Prins, A.; Orr, D.; Andralojc, P.; Reynolds, M.; Carmo-Silva, E.; Parry, M.
Rubisco catalytic properties of wild and domesticated relatives provide scope for improving wheat photosynthesis
J. Exp. Bot.
67
1827-1838
2016
Aegilops cylindrica (A0A0A1IXH7), Hordeum vulgare (A0A0A1IXM9)
Manually annotated by BRENDA team
Liang, F.; Englund, E.; Lindberg, P.; Lindblad, P.
Engineered cyanobacteria with enhanced growth show increased ethanol production and higher biofuel to biomass ratio
Metab. Eng.
46
51-59
2018
Synechocystis sp. (P54205)
Manually annotated by BRENDA team
Yang, C.; Liu, E.; Chen, Y.; Ou-Yang, F.; Li, S.
The comprehensive profile of fermentation products during in situ CO2 recycling by Rubisco-based engineered Escherichia coli
Microb. Cell Fact.
15
133
2016
Brassica napus
-
Manually annotated by BRENDA team
Perdomo, J.; Cavanagh, A.; Kubien, D.; Galmes, J.
Temperature dependence of in vitro Rubisco kinetics in species of Flaveria with different photosynthetic mechanisms
Photosynth. Res.
124
67-75
2015
Flaveria bidentis, Flaveria cronquistii, Flaveria floridana, Flaveria pringlei, Flaveria trinervia, Flaveria angustifolia
Manually annotated by BRENDA team
Bunce, J.
Thermal acclimation of the temperature dependence of the VCmax of Rubisco in quinoa
Photosynthetica
56
1171-1176
2018
Chenopodium quinoa
-
Manually annotated by BRENDA team
Boyd, R.; Gandin, A.; Cousins, A.
Temperature responses of C4 photosynthesis Biochemical analysis of Rubisco, phosphoenolpyruvate carboxylase, and carbonic anhydrase in Setaria viridis
Plant Physiol.
169
1850-1861
2015
Setaria viridis
Manually annotated by BRENDA team
Hermida-Carrera, C.; Kapralov, M.; Galmes, J.
Rubisco catalytic properties and temperature response in crops
Plant Physiol.
171
2549-2561
2016
Glycine max, Hordeum vulgare, Lactuca sativa, Oryza sativa, Zea mays
Manually annotated by BRENDA team
Orr, D.; Alcantara, A.; Kapralov, M.; John Andralojc, P.; Carmo-Silva, E.; Parry, M.
Surveying rubisco diversity and temperature response to improve crop photosynthetic efficiency
Plant Physiol.
172
707-717
2016
Agriophyllum squarrosum (A0A1C3HPL7), Agrostis scabra (A0A1C3HPM5), Agrostis stolonifera (A0A1C3HPL6), Amphicarpaea bracteata (A0A1C3HPM0), Anethum foeniculum (A0A1C3HPQ2), Arctagrostis latifolia (A0A1C3HPM4), Artemisia myriantha (A0A1C3HPM2), Artemisia vulgaris (A0A1C3HPM3), Beta vulgaris (A0A1C3HPL8), Blitum petiolare (A0A1C3HPM9), Bromus anomalus (A0A1C3HPM1), Calamagrostis arundinacea (A0A1C3HPL9), Calamagrostis canescens (A0A1C3HPN2), Calamagrostis foliosa (A0A1C3HPN4), Calamagrostis nutkaensis (A0A1C3HPN0), Calamagrostis stricta subsp. inexpansa (A0A1C3HPM7), Chenopodiastrum murale (A0A1C3HPN5), Chrysanthellum indicum (A0A1C3HPM6), Citrullus ecirrhosus (A0A1C3HPM8), Citrullus lanatus (A0A1C3HPN1), Deschampsia danthonioides (A0A1C3HPP5), Desmodium cinereum (A0A1C3HPP3), Desmodium intortum (A0A1C3HPN7), Desmodium psilocarpum (A0A1C3HPP4), Elymus farctus (A0A1C3HPN9), Embryophyta, Eragrostis tef (A0A1C3HPP2), Erythrina flabelliformis (A0A1C3HPP1), Euphorbia helioscopia (A0A1C3HPN6), Euphorbia microsphaera (A0A1C3HPP0), Festuca pratensis (A0A1C3HPQ5), Flueggea suffruticosa (A0A1C3HPP8), Glycine canescens (A0A1C3HPP9), Glycine max (A0A1C3HPQ3), Hordeum brachyantherum (A0A1C3HPQ0), Hordeum murinum (A0A1C3HPQ4), Lablab purpureus (A0A1C3HPP6), Lepidium campestre (A0A1C3HPQ1), Lolium giganteum (A0A1C3HPN8), Lolium multiflorum (A0A1C3HPP7), Lolium rigidum (A0A1C3HPR5), Macrotyloma uniflorum (A0A1C3HPR0), Manihot esculenta (A0A1C3HPQ9), Mercurialis annua (A0A1C3HPR2), Musa velutina (A0A1C3HPQ7), Nicotiana tabacum (A0A1C3HPR1), Oryza barthii x Oryza glaberrima (A0A1C3HPR4), Oryza eichingeri (A0A1C3HPQ6), Oryza glaberrima (A0A1C3HPR3), Oryza glumipatula (A0A1C3HPQ8), Oryza longistaminata (A0A1C3HPS5), Oryza meridionalis (A0A1C3HPS1), Oryza nivara (A0A1C3HPR9), Oryza punctata (A0A1C3HPS0), Oryza sativa Indica Group (A0A1C3HPR8), Oryza sativa Japonica Group (A0A1C3HPR7), Oxybasis rubra (A0A1C3HPN3), Panicum amarum (A0A1C3HPS4), Panicum dichotomiflorum, Panicum phragmitoides (A0A1C3HPS3), Phaseolus carteri (A0A1C3HPS2), Phaseolus coccineus (A0A1C3HPT4), Phaseolus lunatus (A0A1C3HPT3), Phaseolus vulgaris (A0A1C3HPS8), Poa palustris (A0A1C3HPT1), Puccinellia distans (A0A1C3HPS9), Puccinellia lemmonii (A0A1C3HPS7), Puccinellia maritima (A0A1C3HPT0), Puccinellia nuttalliana (A0A1C3HPS6), Pueraria montana (A0A1C3HPT5), Sphenostylis stenocarpa (A0A1C3HPT2), Tephrosia candida (A0A1C3HPU0), Tephrosia purpurea (A0A1C3HPU3), Tephrosia rhodesica (A0A1C3HPT8), Triticum aestivum (A0A1C3HPU2), Triticum monococcum subsp. aegilopoides (A0A1C3HPT9)
Manually annotated by BRENDA team
Laterre, R.; Pottier, M.; Remacle, C.; Boutry, M.
Photosynthetic trichomes contain a specific rubisco with a modified pH-dependent activity
Plant Physiol.
173
2110-2120
2017
Nicotiana tabacum (DV157962), Nicotiana tabacum
Manually annotated by BRENDA team
Fujihashi, M.; Nishitani, Y.; Kiriyama, T.; Aono, R.; Sato, T.; Takai, T.; Tagashira, K.; Fukuda, W.; Atomi, H.; Imanaka, T.; Miki, K.
Mutation design of a thermophilic Rubisco based on three-dimensional structure enhances its activity at ambient temperature
Proteins
84
1339-1346
2016
Thermococcus kodakarensis (O93627), Thermococcus kodakarensis
Manually annotated by BRENDA team