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Reference on EC 3.4.24.59 - mitochondrial intermediate peptidase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Isaya, G.; Kalousek, F.; Rosenberg, L.E.
Amino-terminal octapeptides function as recognition signals for the mitochondrial intermediate peptidase
J. Biol. Chem.
267
7904-7910
1992
BRENDA: Rattus norvegicus
Textmining: Neurospora, Homo sapiens, Rattus
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Isaya, G.; Kalousek, F.; Rosenberg, L.E.
Sequence analysis of rat mitochondrial intermediate peptidase: similarity to zinc metallopeptidases and to a putative yeast homologue
Proc. Natl. Acad. Sci. USA
89
8317-8321
1992
BRENDA: Rattus norvegicus
Textmining: Saccharomyces cerevisiae, Rattus, other sequences
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Isaya, G.; Miklos, D.; Rollins, R.A.
MIP1, a new yeast gene homologous to the rat mitochondrial intermediate peptidase gene, is required for oxidative metabolism in Saccharomyces cerevisiae
Mol. Cell. Biol.
14
5603-5616
1994
BRENDA: Saccharomyces cerevisiae
Textmining: Rattus, Homo sapiens
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Isaya, G.; Kalousek, F.
Mitochondrial intermediate peptidase
Methods Enzymol.
248
556-567
1995
Rattus norvegicus
Manually annotated by BRENDA team
Kalousek, F.; Isaya, G.; Rosenberg, L.E.
Rat liver mitochondrial intermediate peptidase (MIP): purification and initial characterization
EMBO J.
11
2803-2809
1992
BRENDA: Rattus norvegicus
Textmining: Rattus
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Branda, S.S.; Isaya, G.
Prediction and identification of new natural substrates of the yeast mitochondrial intermediate peptidase
J. Biol. Chem.
270
27366-27373
1995
BRENDA: Saccharomyces cerevisiae
Textmining: Electron
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Isaya, G.
Mitochondrial intermediate peptidase
Handbook Of Proteolytic Enzymes(Barrett,A. J. ,Rawlings,N. D. ,Woessner,J. F. ,Eds. )Academic Press
1
366-369
2004
Saccharomyces cerevisiae, Homo sapiens, Mus musculus, Rattus norvegicus, Schizophyllum commune
-
Manually annotated by BRENDA team
Hervouet, E.; Pecina, P.; Demont, J.; Vojtiskova, A.; Simonnet, H.; Houstek, J.; Godinot, C.
Inhibition of cytochrome c oxidase subunit 4 precursor processing by the hypoxia mimic cobalt chloride
Biochem. Biophys. Res. Commun.
344
1086-1093
2006
BRENDA: Homo sapiens
Textmining: Saccharomyces cerevisiae
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
van der Nest, M.A.; Slippers, B.; Stenlid, J.; Wilken, P.M.; Vasaitis, R.; Wingfield, M.J.; Wingfield, B.D.
Characterization of the systems governing sexual and self-recognition in the white rot homobasidiomycete Amylostereum areolatum
Curr. Genet.
53
323-336
2008
BRENDA: Amylostereum areolatum
Textmining: Coprinopsis cinerea, Schizophyllum commune
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Marcondes, M.; Torquato, R.; Assis, D.; Juliano, M.; Hayashi, M.; Oliveira, V.
Mitochondrial intermediate peptidase: Expression in Escherichia coli and improvement of its enzymatic activity detection with FRET substrates
Biochem. Biophys. Res. Commun.
391
123-128
2010
BRENDA: Homo sapiens
Textmining: Escherichia coli, Escherichia coli BL21 (DE3) pLysS
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Lee, S.F.; Srinivasan, B.; Sephton, C.F.; Dries, D.R.; Wang, B.; Yu, C.; Wang, Y.; Dewey, C.M.; Shah, S.; Jiang, J.; Yu, G.
Gamma-secretase-regulated proteolysis of the Notch receptor by mitochondrial intermediate peptidase
J. Biol. Chem.
286
27447-27453
2011
Homo sapiens
Manually annotated by BRENDA team
Voegtle, F.N.; Prinz, C.; Kellermann, J.; Lottspeich, F.; Pfanner, N.; Meisinger, C.
Mitochondrial protein turnover: role of the precursor intermediate peptidase Oct1 in protein stabilization
Mol. Biol. Cell
22
2135-2143
2011
Saccharomyces cerevisiae
Manually annotated by BRENDA team
Teixeira, P.; Glaser, E.
Processing peptidases in mitochondria and chloroplasts
Biochim. Biophys. Acta
1833
360-370
2013
Rattus norvegicus
Manually annotated by BRENDA team
Marcondes, M.; Alves, F.; Assis, D.; Hirata, I.; Juliano, L.; Oliveira, V.; Juliano, M.
Substrate specificity of mitochondrial intermediate peptidase analysed by a support-bound peptide library
FEBS Open Bio
5
429-436
2015
Homo sapiens
Automatic Mining of ENzyme DAta
Carrie, C.; Venne, A.; Zahedi, R.; Soll, J.
Identification of cleavage sites and substrate proteins for two mitochondrial intermediate peptidases in Arabidopsis thaliana
J. Exp. Bot.
66
2691-2708
2015
BRENDA: Arabidopsis thaliana (W6HYK5), Arabidopsis thaliana
Textmining: Arabidopsis, Saccharomyces cerevisiae
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Singh, R.; Goyal, V.D.; Kumar, A.; Sabharwal, N.S.; Makde, R.D.
Crystal structures and biochemical analyses of intermediate cleavage peptidase role of dynamics in enzymatic function
FEBS Lett.
593
443-454
2019
Saccharomyces cerevisiae (P40051), Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Marcondes, M.F.; Alves, F.M.; Assis, D.M.; Hirata, I.Y.; Juliano, L.; Oliveira, V.; Juliano, M.A.
Substrate specificity of mitochondrial intermediate peptidase analysed by a support-bound peptide library
FEBS open bio
5
429-436
2015
Homo sapiens
Manually annotated by BRENDA team
Carrie, C.; Venne, A.S.; Zahedi, R.P.; Soll, J.
Identification of cleavage sites and substrate proteins for two mitochondrial intermediate peptidases in Arabidopsis thaliana
J. Exp. Bot.
66
2691-2708
2015
Arabidopsis thaliana (F4HZG9), Arabidopsis thaliana, Arabidopsis, Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Huang, S.; Nelson, C.J.; Li, L.; Taylor, N.L.; Stroeher, E.; Peteriet, J.; Millar, A.H.
Intermediate claevage peptidase55 modifies enzyme amino termini and alters protein stability in Arabidopsis mitochondria
Plant Physiol.
168
415-427
2015
BRENDA: Arabidopsis thaliana (F4HZG9)
Textmining: Arabidopsis, Saccharomyces cerevisiae, Transformation
Manually annotated by BRENDA teamAutomatic Mining of ENzyme DAta
Pena-Diaz, P.; Mach, J.; Kriegova, E.; Poliak, P.; Tachezy, J.; Lukes, J.
Trypanosomal mitochondrial intermediate peptidase does not behave as a classical mitochondrial processing peptidase
PLoS ONE
13
e0196474
2018
Trypanosoma brucei (Q389Z4), Trypanosoma brucei
Manually annotated by BRENDA team
Chew, A; Sirugo, G; Alsobrook, JP; Isaya, G
Functional and genomic analysis of the human mitochondrial intermediate peptidase, a putative protein partner of frataxin.
Genomics
65
104-12
2000
Homo sapiens, Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Isaya, G; Sakati, WR; Rollins, RA; Shen, GP; Hanson, LC; Ullrich, RC; Novotny, CP
Mammalian mitochondrial intermediate peptidase: structure/function analysis of a new homologue from Schizophyllum commune and relationship to thimet oligopeptidases.
Genomics
28
450-61
1995
Bacteria, eukaryota, Mammalia, Rattus, Saccharomyces cerevisiae, Schizophyllum commune
Automatic Mining of ENzyme DAta
Chew, A; Buck, EA; Peretz, S; Sirugo, G; Rinaldo, P; Isaya, G
Cloning, expression, and chromosomal assignment of the human mitochondrial intermediate peptidase gene (MIPEP).
Genomics
40
493-6
1997
Homo sapiens, Saccharomyces cerevisiae, Rattus
Automatic Mining of ENzyme DAta
Branda, SS; Yang, ZY; Chew, A; Isaya, G
Mitochondrial intermediate peptidase and the yeast frataxin homolog together maintain mitochondrial iron homeostasis in Saccharomyces cerevisiae.
Hum Mol Genet
8
1099-110
1999
Saccharomyces cerevisiae, Homo sapiens
Automatic Mining of ENzyme DAta
James, TY; Kües, U; Rehner, SA; Vilgalys, R
Evolution of the gene encoding mitochondrial intermediate peptidase and its cosegregation with the A mating-type locus of mushroom fungi.
Fungal Genet Biol
41
381-90
2004
Fungi
Automatic Mining of ENzyme DAta
Singh, R; Jamdar, SN; Goyal, VD; Kumar, A; Ghosh, B; Makde, RD
Structure of the human aminopeptidase XPNPEP3 and comparison of its in vitro activity with Icp55 orthologs: Insights into diverse cellular processes.
J Biol Chem
292
10035-10047
2017
Homo sapiens, Saccharomyces cerevisiae, plant
Automatic Mining of ENzyme DAta
Kawabata, S; Nakagawa, K; Muta, T; Iwanaga, S; Davie, EW
Rabbit liver microsomal endopeptidase with substrate specificity for processing proproteins is structurally related to rat testes metalloendopeptidase 24.15.
J Biol Chem
268
12498-503
1993
Rattus, Escherichia coli, Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Nett, JH; Schägger, H; Trumpower, BL
Processing of the presequence of the Schizosaccharomyces pombe Rieske iron-sulfur protein occurs in a single step and can be converted to two-step processing by mutation of a single proline to serine in the presequence.
J Biol Chem
273
8652-8
1998
Schizosaccharomyces pombe, Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Nett, JH; Trumpower, BL
Intermediate length Rieske iron-sulfur protein is present and functionally active in the cytochrome bc1 complex of Saccharomyces cerevisiae.
J Biol Chem
274
9253-7
1999
Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Nett, JH; Denke, E; Trumpower, BL
Two-step processing is not essential for the import and assembly of functionally active iron-sulfur protein into the cytochrome bc1 complex in Saccharomyces cerevisiae.
J Biol Chem
272
2212-7
1997
Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Lobo-Hajdu, G; Braun, HP; Romp, N; Grivell, LA; Berden, JA; Schmitz, UK
Subunit VII of ubiquinol:cytochrome-c oxidoreductase from Neurospora crassa is functional in yeast and has an N-terminal extension that is not essential for mitochondrial targeting.
Biochem J
320 ( Pt 3)
769-75
1996
Neurospora crassa
Automatic Mining of ENzyme DAta
Kües, U; James, TY; Vilgalys, R; Challen, MP
The chromosomal region containing pab-1, mip, and the A mating type locus of the secondarily homothallic homobasidiomycete Coprinus bilanatus.
Curr Genet
39
16-24
2001
Agaricomycetes, Coprinopsis scobicola, Schizophyllum commune
Automatic Mining of ENzyme DAta
Chen, BZ; Gui, F; Xie, BG; Zou, F; Jiang, YJ; Deng, YJ
Sequence and comparative analysis of the MIP gene in Chinese straw mushroom, Volvariella volvacea.
Genome
2012
Fungi, Volvariella volvacea
Automatic Mining of ENzyme DAta
Hsiao, CP; Wang, D; Kaushal, A; Saligan, L
Mitochondria-Related Gene Expression Changes Are Associated With Fatigue in Patients With Nonmetastatic Prostate Cancer Receiving External Beam Radiation Therapy.
Cancer Nurs
2012
Homo sapiens
Automatic Mining of ENzyme DAta
van Diepen, LT; Olson, A; Ihrmark, K; Stenlid, J; James, TY
Extensive trans-specific polymorphism at the mating type locus of the root decay fungus heterobasidion.
Mol Biol Evol
30
2286-301
2013
Heterobasidion, Heterobasidion annosum
Automatic Mining of ENzyme DAta
Au, CH; Wong, MC; Bao, D; Zhang, M; Song, C; Song, W; Law, PT; Kes, U; Kwan, HS
The genetic structure of the A mating-type locus of Lentinula edodes.
Gene
535
184-90
2014
Agaricomycetes
Automatic Mining of ENzyme DAta
Calvo, SE; Julien, O; Clauser, KR; Shen, H; Kamer, KJ; Wells, JA; Mootha, VK
Comparative Analysis of Mitochondrial N-Termini from Mouse, Human, and Yeast.
Mol Cell Proteomics
16
512-523
2017
Saccharomyces cerevisiae, Mus musculus
Automatic Mining of ENzyme DAta
Chitrala, KN; Hernandez, DG; Nalls, MA; Mode, NA; Zonderman, AB; Ezike, N; Evans, MK
Race-specific alterations in DNA methylation among middle-aged African Americans and Whites with metabolic syndrome.
Epigenetics
1-21
2019
Theta
Automatic Mining of ENzyme DAta
Prel, A; Dozier, C; Combier, JP; Plaza, S; Besson, A
Evidence That Regulation of Pri-miRNA/miRNA Expression Is Not a General Rule of miPEPs Function in Humans.
Int J Mol Sci
22
2021
Homo sapiens, plant
Automatic Mining of ENzyme DAta
Eldomery, MK; Akdemir, ZC; Vgtle, FN; Charng, WL; Mulica, P; Rosenfeld, JA; Gambin, T; Gu, S; Burrage, LC; Al Shamsi, A; Penney, S; Jhangiani, SN; Zimmerman, HH; Muzny, DM; Wang, X; Tang, J; Medikonda, R; Ramachandran, PV; Wong, LJ; Boerwinkle, E; Gibbs, RA; Eng, CM; Lalani, SR; Hertecant, J; Rodenburg, RJ; Abdul-Rahman, OA; Yang, Y; Xia, F; Wang, MC; Lupski, JR; Meisinger, C; Sutton, VR
MIPEP recessive variants cause a syndrome of left ventricular non-compaction, hypotonia, and infantile death.
Genome Med
8
106
2016
Homo sapiens, Cucumber necrosis virus, Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Stames, EM; O'Toole, JF
Mitochondrial aminopeptidase deletion increases chronological lifespan and oxidative stress resistance while decreasing respiratory metabolism in S. cerevisiae.
PLoS One
8
e77234
2013
Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Coenen, MJ; Smeitink, JA; Smeets, R; Trijbels, FJ; den Heuvel, LP
Mutation detection in four candidate genes (OXA1L, MRS2L, YME1L and MIPEP) for combined deficiencies in the oxidative phosphorylation system.
J Inherit Metab Dis
28
1091-7
2005
Homo sapiens, Saccharomyces cerevisiae
Automatic Mining of ENzyme DAta
Gakh, O; Cavadini, P; Isaya, G
Mitochondrial processing peptidases.
Biochim Biophys Acta
1592
63-77
2002
Homo sapiens
Automatic Mining of ENzyme DAta