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Information on EC 3.4.13.9 - Xaa-Pro dipeptidase and Organism(s) Homo sapiens and UniProt Accession P12955

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EC Tree
     3 Hydrolases
         3.4 Acting on peptide bonds (peptidases)
             3.4.13 Dipeptidases
                3.4.13.9 Xaa-Pro dipeptidase
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Select one or more organisms in this record: ?
This record set is specific for:
Homo sapiens
UNIPROT: P12955 not found.
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Word Map
The taxonomic range for the selected organisms is: Homo sapiens
The expected taxonomic range for this enzyme is: Bacteria, Archaea, Eukaryota
Reaction Schemes
hydrolysis of Xaa-/-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro
hydrolysis of Xaa-/-Pro dipeptides; also acts on aminoacyl-hydroxyamine analogues. No action on Pro-Pro
Synonyms
prolidase, serum prolidase, peptidase d, prolidase i, organophosphorus acid anhydrolase, proline dipeptidase, prolidase ii, imidodipeptidase, quiescent cell proline dipeptidase, prolyl dipeptidase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
prolidase
-
dipeptidase, proline
-
-
-
-
DPP8
-
-
gamma-peptidase
-
-
-
-
imidodipeptidase
-
-
-
-
PepD
-
-
peptidase D
post-proline-cleaving aminopeptidase
-
-
prolidase
prolidase I
-
isozyme
prolidase II
-
isozyme
Proline dipeptidase
-
-
-
-
proline iminopeptidase
-
-
prolyl dipeptidase
-
-
quiescent cell proline dipeptidase
serum prolidase
-
-
X-Pro dipeptidase
-
-
-
-
additional information
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
hydrolysis of Xaa-/-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro
show the reaction diagram
hydrolysis of Xaa-/-Pro dipeptides; also acts on aminoacyl-hydroxyamine analogues. No action on Pro-Pro
show the reaction diagram
mechanism of substrate specificity and catalysis, overview
-
CAS REGISTRY NUMBER
COMMENTARY hide
9025-32-5
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
Ala-Pro + H2O
Ala + Pro
show the reaction diagram
Ala-Pro-amino-4-trifluoromethylcoumarin + H2O
?
show the reaction diagram
-
-
-
?
Ala-Pro-amino-4-trifluoromethylcoumarin + H2O
alanine + Pro-4-trifluoromethylcoumarin
show the reaction diagram
Arg-Pro + H2O
Arg + Pro
show the reaction diagram
-
preferred substrate
-
-
?
Asp-Pro + H2O
Asp + Pro
show the reaction diagram
-
-
-
-
?
Gly-L-Pro + H2O
Gly + L-Pro
show the reaction diagram
-
-
-
-
?
Gly-Pro + H2O
Gly + Pro
show the reaction diagram
Gly-Pro + H2O
Glycine + proline
show the reaction diagram
-
-
-
?
Gly-Pro-4-trifluoromethylcoumarin-7-amide + H2O
Gly + Pro + 7-amino-4-trifluoromethylcoumarin
show the reaction diagram
-
-
-
-
?
Gly-Pro-p-nitroanilide + H2O
Gly + Pro + p-nitroaniline
show the reaction diagram
-
-
-
-
?
glycyl-L-hydroxyproline + H2O
Gly + L-hydroxyproline
show the reaction diagram
-
-
-
-
?
L-Ala-Pro + H2O
L-Ala + Pro
show the reaction diagram
-
-
-
-
?
L-Leu-L-Pro + H2O
L-Leu + L-Pro
show the reaction diagram
-
-
-
-
?
L-Met-L-Pro + H2O
L-Met + L-Pro
show the reaction diagram
-
-
-
-
?
L-Phe-Pro + H2O
L-Phe + Pro
show the reaction diagram
L-Pro-Gly + H2O
L-Pro + Gly
show the reaction diagram
-
-
-
-
?
L-Pro-L-Ala + H2O
L-Pro + L-Ala
show the reaction diagram
-
-
-
-
?
L-Pro-L-Asp + H2O
L-Pro + L-Asp
show the reaction diagram
-
-
-
-
?
L-Pro-L-Glu + H2O
L-Pro + L-Glu
show the reaction diagram
-
-
-
-
?
L-Pro-L-Leu + H2O
L-Pro + L-Leu
show the reaction diagram
-
-
-
-
?
L-Pro-L-Met + H2O
L-Pro + L-Met
show the reaction diagram
-
-
-
-
?
L-Pro-L-Phe + H2O
L-Pro + L-Phe
show the reaction diagram
-
-
-
-
?
L-Pro-L-Ser + H2O
L-Pro + L-Ser
show the reaction diagram
-
-
-
-
?
L-Pro-L-Val + H2O
L-Pro + L-Val
show the reaction diagram
-
-
-
-
?
L-Val-L-Pro + H2O
L-Val + L-Pro
show the reaction diagram
-
-
-
-
?
Leu-Pro + H2O
Leu + Pro
show the reaction diagram
-
-
-
-
?
Lys-Pro + H2O
Lys + Pro
show the reaction diagram
-
-
-
-
?
melphalan + H2O
?
show the reaction diagram
Met-Pro + H2O
L-Met + L-Pro
show the reaction diagram
-
68% of the activity with Gly-L-Pro
-
-
?
Met-Pro + H2O
Met + Pro
show the reaction diagram
Phe-Pro + H2O
Phe + Pro
show the reaction diagram
-
-
-
-
?
Pro-Pro + H2O
Pro + Pro
show the reaction diagram
-
-
-
-
?
prophalan-D + H2O
?
show the reaction diagram
prophalan-L + H2O
?
show the reaction diagram
Ser-Pro + H2O
Ser + Pro
show the reaction diagram
-
-
-
-
?
soman + H2O
?
show the reaction diagram
-
organophosphorus acid anhydrolase activity
-
-
?
Val-Pro + H2O
Val + Pro
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
Gly-Pro + H2O
Glycine + proline
show the reaction diagram
-
-
-
?
melphalan + H2O
?
show the reaction diagram
-
prolidase-dependence of prodrug cytotoxicity in the cell lines compared to that of the parent drug, melphalan, overview
-
-
?
prophalan-D + H2O
?
show the reaction diagram
-
the D-proline prodrug of melphalan, bioactivation and uptake of prolidase-targeted proline prodrugs, prolidase-dependence of prodrug cytotoxicity in the cell lines compared to that of the parent drug, melphalan, overview
-
-
?
prophalan-L + H2O
?
show the reaction diagram
-
the L-proline prodrug of melphalan, bioactivation and uptake of prolidase-targeted proline prodrugs, prolidase-dependence of prodrug cytotoxicity in the cell lines compared to that of the parent drug, melphalan, overview
-
-
?
additional information
?
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mn2+
the protein can host two metal ions in the active site of each constituent monomer, two different kinds of metals, Mn and Zn can be simultaneously present in the protein active sites with the protein partially maintaining its enzymatic activity. Dimeric metalloenzyme, one of the two active sites is occupied by two Zn ions and the second one by one Zn and one Mn ion, in both dinuclear units a histidine residue is bound to a Zn ion, binding structure, overview
Zn2+
the protein can host two metal ions in the active site of each constituent monomer, two different kinds of metals, Mn and Zn can be simultaneously present in the protein active sites with the protein partially maintaining its enzymatic activity. Dimeric metalloenzyme, one of the two active sites is occupied by two Zn ions and the second one by one Zn and one Mn ion, in both dinuclear units a histidine residue is bound to a Zn ion, binding structure, overview
Ca2+
-
can substitute for Mn2+ by less than 30%
Mg2+
-
can substitute for Mn2+ by less than 30%
Na+
-
the enzyme contains five Na+ ions, four organized in two dinuclear centres and one located in an external position of the homodimer, each subunit contains two ions Na+, binding structure, overview
Zn2+
-
can substitute for Mn2+ by less than 30%
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
-
1 mM, 55% residual activity
betulinic acid
-
i.e. 3beta-hdroxy-lup-20(29)-en-28-oic acid, inhibits the enzyme and is involved in anti-angiogenesis due to further inhibition of expression and decrease in expressions of alpha1 and alpha2 integrins, hypoxia-inducible factor 1, HIF-1, and vascular endothelial cell growth factor, detailed overview
Colchicine
-
colchicine has a slight inhibiting effect on prolidase activity for L-Val-L-Pro, the activity reaches its highest inhibition percentage of 59% at 2.0 mM
Cu2+
-
strong
D,L-homocysteine
-
inhibits the activity at 50 mM
D,L-homocysteine-thiolactone
-
inhibits the activities of isozymes prolidase I and II in a concentration-dependent manner
daunorubicin
-
a cytotoxic anthracycline, inhibits the enzyme and collagen biosynthesis, inhibition mechanism might act via chelating of essential Mn2+ ions, more effective than doxorubicin, also inhibits DNA synthesis
DL-Ethionine
-
activates at concentrations of 1-50 mM, overview
DL-homocysteine
-
slightly activates at concentrations of 1-20 mM, inhibitory at over 30 mM, overview
DL-homocysteine thiolactone
-
activates at concentrations of 1-30 mM, inhibitory at over 50 mM, overview
DL-methionine
-
activates at concentrations of 1-30 mM, inhibitory at over 50 mM, overview
doxorubicin
-
a cytotoxic anthracycline, inhibits the enzyme and collagen biosynthesis, inhibition mechanism might act via chelating of essential Mn2+ ions, less effective than daunorubicin, also inhibits DNA synthesis
doxycyclin
-
induces down-regulation of the enzyme as a post-translational event
echistatin
-
treatment of cells results in inhibition of collagen production and enzyme activity and expression
-
EDTA
-
1 mM, 70% residual activity
L-isoleucine
-
inhibitory to enzyme isoform prolidase I, activating isoform prolidase II
L-leucine
-
inhibitory to enzyme isoform prolidase I, activating isoform prolidase II
L-valine
-
inhibitory to enzyme isoform prolidase I, activating isoform prolidase II
L-valinyl-D-boroproline
-
-
melanin
-
30% inhibition at 0.1 mg/ml, reverses inhibition of prolidase by netilmicin
N-Benzyloxycarbonyl-L-proline
netilmicin
-
80% inhibition at 0.01 mM, reversible by melanin
NiCl2
-
-
p-chloromercuribenzoate
-
-
p-hydroxymercuribenzoate
-
-
paracetamol
-
mechanism of PLD inhibition by paracetamol is noncompetitive inhibition
Phenacetin
-
-
sodium salicylate
-
-
Zn2+
-
strong
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
(4S)-4-ethyl-4-hydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione
-
deregulates the collagen metabolism and strongly induces inhibition of collagen synthesis, but activates the enzyme accompanied by increase in the expression of b1 integrin receptor and some b1 integrin-dependent signalling proteins, e.g. Sos, MAPK ERK1and ERK2, and transcription factor NF-kB, the specific MEK/ERK inhibitor UO126 inhibits campthotecin-induced up-regulation of prolidase activity
Acetylsalicylic acid
-
-
alpha-ketoglutarate
-
30% activation at 0.01 mM
apigenin-7-O-glucuronide
-
stimulates the enzyme and collagen biosynthesis in osteogenesis imperfecta type I cells, overview
Colchicine
-
colchicine enhances PLD activity for Gly-L-Pro and L-Leu-L-Pro, the highest enhancement of PLD on Gly-L-Pro is 141% at 0.01 mM
D,L-ethionine
-
enhances the activity of isozyme prolidase I, D,L-ethionine strongly enhances the activity of isozyme prolidase II compared with L-ethionine
D,L-homocysteine
D,L-methionine
D-alanine
-
activation of isoforms prolidase I and prolidase II
D-ethionine
-
enhances the activity of isozymes prolidase I and II
D-isoleucine
-
activation of isoforms prolidase I and prolidase II
D-leucine
-
activation of isoforms prolidase I and prolidase II
D-methionine
D-serine
-
activation of isoforms prolidase I and prolidase II
D-valine
-
activation of isoforms prolidase I and prolidase II
glycine
L-alanine
-
activation of isoforms prolidase I and prolidase II
L-ethionine
-
enhances the activity of isozyme prolidase I
L-isoleucine
-
inhibitory to enzyme isoform prolidase I, activating isoform prolidase II
L-leucine
-
inhibitory to enzyme isoform prolidase I, activating isoform prolidase II
L-methionine
L-serine
-
activation of isoforms prolidase I and prolidase II
L-valine
-
inhibitory to enzyme isoform prolidase I, activating isoform prolidase II
MnCl2
-
stimulation of activity against substrates L-Pro-Gly, L-Pro-L-Glu, L-Pro-L-Leu, L-Pro-L-Ser, and L-Pro-L-Phe, inhibitory to hydrolysis of substrates L-Pro-L-Ala, L-Pro-L-Val, L-Pro-L-Met, and L-Pro-L-Asp
N-[N'-(2-bromoethyl)-N'-nitrosocarbamoyl]-L-proline
-
significantly increases MCF-7 cells prolidase activity, when used at 0.05-0.25 mM concentrations
N-[N'-(2-chloroethyl)-N'-nitrosocarbamoyl]-L-proline
-
significantly increases MCF-7 cells prolidase activity, when used at 0.05-0.25 mM concentrations
N-[N'-(3-chloropropyl)-N'-nitrosocarbamoyl]-L-proline
-
significantly increases MCF-7 cells prolidase activity, when used at 0.05-0.25 mM concentrations
N-[N'-(4-bromophenyl)-N'-nitrosocarbamoyl]-L-proline
-
significantly increases MCF-7 cells prolidase activity, when used at 0.05-0.25 mM concentrations
NO
-
NO stimulate both prolidase activity and collagen biosynthesis in fibroblasts, increase in the enzyme activity is due to increase in the enzyme phosphorylation on serine/threonine residue
pectolinarin
-
stimulates the enzyme and collagen biosynthesis in osteogenesis imperfecta type I cells, overview
thrombin
-
treatment of cells results in enhancement of collagen production and enzyme activity and expression, accompanied by raise in expression of focal adhesion kinase pp125 and mitogen-activated protein kinases
-
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.127 - 6
Ala-Pro
1.64 - 6.23
Gly-L-Pro
2.88 - 7.1
Gly-Pro
0.395 - 0.628
L-Leu-L-Pro
4.11 - 9.89
L-Met-L-Pro
6.8 - 26.9
L-Pro-Gly
4.2 - 19.1
L-Pro-L-Met
3.2 - 28.6
L-Pro-L-Val
0.243 - 0.269
L-Val-L-Pro
1.3 - 10.4
Leu-Pro
6
Phe-Pro
-
-
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.2 - 22
Ala-Pro
683
Gly-Pro
-
-
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
additional information
-
-
-
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.005
netilmicin
Homo sapiens
-
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
13.3
prolidase in presence of 10 mM Zn2+
158.3
prolidase in presence of 10 mM Mn2+
10
-
at 30°C, with organophosphorus compound substrate diisopropyl phosphorofluoridate, DFP
2000
-
-
21500
-
pH 7.8, 37°C
226.5
-
cell lystae supernatant, pH 7.8, 37°C
5.632
-
37°C, pH 7.8, dipeptidase activity
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7.8
assay at
10
-
dipeptidase activity, 80% of maximum activity
5
-
dipeptidase activity, 20% of maximum activity
6
-
assay at
7.25 - 7.5
-
prolidase I
7.5 - 8
-
prolidase II
7.6
-
assay at
7.8 - 8
-
assay at
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5 - 7.5
-
-
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
50
assay at
37 - 50
-
native enzyme
40
-
assay at
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37 - 50
-
50% of maximal activity at 37°C
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
Uniprot
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
from pregenancies with healthy fetusses and those with neural tube defect
Manually annotated by BRENDA team
-
enzyme activity is increased in aortic dilatation compared to controls
Manually annotated by BRENDA team
-
prolidase activity in blood plasma is about 6% as great as in erythrocytes
Manually annotated by BRENDA team
-
prolidase activity is increased in ovarian cancer, overview
Manually annotated by BRENDA team
-
high activity
Manually annotated by BRENDA team
-
from healthy individuals and from tuberculous pleurisy patients, 19.1fold elevated pleural fluid and serum prolidase enzyme activity in patients with tuberculosis pleurisy compared with non-tuberculosis pleurisy group
Manually annotated by BRENDA team
-
Ishikawa cell line
Manually annotated by BRENDA team
-
vaginal fluid
Manually annotated by BRENDA team
additional information
-
prolidase is especially active in growing tissues
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
post-Golgi vesicular fraction
Manually annotated by BRENDA team
additional information
-
subscellular localization in cells natively expressing the enzyme and in cells recombinantly expressing the enzyme
-
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
malfunction
misfunctioning causes prolidase deficiency, a recessive connective tissue disorder characterized by severe skin lesions, mental retardation and respiratory tract infections
malfunction
metabolism
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PEPD_HUMAN
493
0
54548
Swiss-Prot
other Location (Reliability: 5)
PDB
SCOP
CATH
UNIPROT
ORGANISM
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
105000
-
2 * 105000, recombinant His-tagged enzyme, SDS-PAGE
108000 - 116000
115000
-
gel filtration
120000
-
gel filtration
120000 - 130000
-
gel filtration
123000
-
recombinant enzyme from Escherichia coli
165000
-
gel filtration, prolidase II
185000
-
gel filtration, prolidase II from normal human and mother of patient with prolidase deficiencyr
210000
-
analytical ultracentrifugation
53000
-
x * 58000, processed glycoslyated enzyme, SDS-PAGE, x * 53000, unprocessed enzyme, SDS-PAGE
54305
56000
57000
-
2 * 54305, sequence calculation, 2 * 55000-58000, native enzyme from different tissues, 2 * 56000, recombinant enzyme from Saccharomyces cerevisiae, 2 * 73000, recombinant enzyme from Pichia pastoris, 2 * 58000, recombinant enzyme from CHO cells, 2 * 57000, recombinant enzyme from Escherichia coli
58000
73000
95000
-
2 * 95000, SDS-PAGE, prolidase II from normal human and patients mother
additional information
-
hydrodynamic properties of wild-type and mutant DPP8s
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
structure comparison to the enzyme from Pyrococcus horikoshii OT3 prolidase, overview
dimer
homodimer
-
-
oligomer
-
x * 58000, SDS-PAGE
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glycoprotein
phosphoprotein
proteolytic modification
-
a 29 amino acid signal or propeptide is cleaved from the enzyme after synthesis
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
A212P
-
naturally occuring mutation involved in prolidase deficiency
F822A
-
site-directed mutagenesis, the mutant enzyme shows reduced activity compared to the wild-type enzyme
G278D
-
naturally occuring point mutation causing prolidase deficiency
G448R
-
naturally occuring point mutation causing prolidase deficiency
H859A
-
site-directed mutagenesis, the mutant enzyme shows reduced activity compared to the wild-type enzyme
L368R
-
naturally occuring mutation involved in prolidase deficiency
R184Q
-
naturally occuring point mutation causing prolidase deficiency
R265X
-
naturally occuring point mutation causing prolidase deficiency
R276N
-
naturally occuring point mutation causing prolidase deficiency
S202F
V833A
-
site-directed mutagenesis, the mutant enzyme shows reduced activity compared to the wild-type enzyme
Y231del
-
homozygous mutation observed in two unrelated patients with enzyme deficiency. Mutation results in loss of enzyme activity in skin fibroblasts. Long-term cultured fibroblasts bearing the mutant accumulate Gly-L-Pro dipeptide intracellularly
Y256X
-
a homozygous nonsense C > G transition at nucleotide 768 is a naturally occuring mutation, which leads to recalcitrant leg ulceration, splenomegaly, and photosensitive rash due to prolidase deficiency, phenotype, overview
Y844A
-
site-directed mutagenesis, the mutant enzyme shows reduced activity compared to the wild-type enzyme
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
48
-
abnormal prolidase, inactivation above
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
Mn2+ and GSH stabilize the untagged recombinant enzyme
-
PEG and glycerol stabilize the enzyme
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
37°C, purified recombinant enzyme, loss of almost all activity after 2 days, 70% remaining activity after one day for the detagged enzyme, 47% remaining activity for the tagged enzyme
-
37°C, recombinant enzyme from expression in Escherichia coli, stable for 6 days
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
2 isoenzymes
-
from JURKAT cells
-
partially
-
prolidase I and II
-
recombinant enzyme, expression in Saccharomyces cerevisiae
-
recombinant His-tagged enzyme from Escherichia coli by nickel affinity chromatography, removal of His-tag by factor Xa
-
recombinant His-tagged wild-type and mutant enzymes from HEK-293T cells by nickel affinity and anion exchange chromatography, followed by gel filtration
-
recombinant N-terminally His-tagged enzyme from Escherichia coli by nickel affinity chromatography to homogeneity, on-column digestion of the N-terminal His-tag by factor Xa
-
to homogeneity
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression of N-etrminally His-tagged enzyme in Escherichia coli strain BL21
DNA and amino acid sequence analysis, high homology to dipeptidyl-peptidase II, EC 3.4.14.2
-
DNA sequence determination and analysis, expression in human 293T fibroblastic cells as GFP- and Myc-tagged enzymes
-
expression in Escherichia coli
-
expression of His-tagged wild-type and mutant enzymes in HEK-293T cells, expression in Spodoptera frugiperda Sf9 cells via baculovirus infection system
-
expression of N-terminally His-tagged enzyme in Escherichia coli strain BL21 (DE3) under the control of the cytomegalovirus promoter and the SP163 enhancer
-
expression of the enzyme, tagged with either HA-tag or Myc-tag, in 293T cells, expressio of mutant enzymes in Escherichia coli XL1-Blue
-
expression of wild-type and mutant enzymes in Escherichia coli, CHO cells, Pichia pastoris, or Saccharomyces cerevisiae, DNA and amino acid sequence determination and anaylsis, recombinant human prolidase expressed in Pichia pastoris catalyzes the hydrolysis of organophosphorus compounds as well as the digestion of Gly-Pro dipeptides
-
gene PEPD, localized on chromosome 19, genetic structure and organization, expression in CHO cells and in colorectal cancer cells
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
diagnostics
drug development
food industry
-
prolidase can be used in dietary industry as bitterness reducing agent
medicine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Endo, F.; Tanoue, A.; Nakai, H.; Hata, A.; Indo, Y.; Titani, K.; Matsuda, I.
Primary structure and gene localization of human prolidase
J. Biol. Chem.
264
4476-4481
1989
Homo sapiens
Manually annotated by BRENDA team
Myara, I.; Moatti, N.; Lemonnier, A.
Separation of two erythrocyte prolidase isoforms by fast protein liquid chromatography; application to prolidase deficiency
J. Chromatogr.
493
170-175
1989
Homo sapiens
Manually annotated by BRENDA team
Richter, A.M.; Lancaster, G.L.; Choy, F.Y.M.; Hechtman, P.
Purification and characterization of activated human erythrocyte prolidase
Biochem. Cell Biol.
67
34-41
1989
Homo sapiens
Manually annotated by BRENDA team
Butterworth, J.; Priestman, D.A.
Prolidases of human skin fibroblasts
Biochem. Soc. Trans.
13
237
1985
Homo sapiens
-
Manually annotated by BRENDA team
Underwood, R.; Chiravuri, M.; Lee, H.; Schmitz, T.; Kabcenell, A.K.; Yardley, K.; Huber, B.T.
Sequence, purification, and cloning of an intracellular serine protease, quiescent cell proline dipeptidase
J. Biol. Chem.
274
34053-34058
1999
Homo sapiens
Manually annotated by BRENDA team
Myara, I.; Cosson, C.; Moatti, N.; Lemonnier, A.
Human kidney prolidase--purification, preincubation properties and immunological reactivity
Int. J. Biochem.
26
207-214
1994
Homo sapiens
Manually annotated by BRENDA team
Ohhashi, T.; Ohno, t.; Arata, J.; Sugahara, K.; Kodama, H.
Characterization of prolidase I and II from erythrocytes of a control, a patient with prolidase deficiency and her mother
Clin. Chim. Acta
187
1-10
1990
Homo sapiens
Manually annotated by BRENDA team
Chiravuri, M.; Schmitz, T.; Yardley, K.; Underwood, R.; Dayal, Y.; Huber, B.T.
A novel apoptotic pathway in quiescent lymphocytes identified by inhibition of a post-proline cleaving aminodipeptidase: a candidate target protease, quiescent cell proline dipeptidase
J. Immunol.
163
3092-3099
1999
Homo sapiens
Manually annotated by BRENDA team
Masuda, S.; Watanabe, H.; Morioka, M.; Fujita, Y.; Ageta, T.; Kodama, H.
Characteristics of partially purified prolidase and prolinase from the human prostate
Acta Med. Okayama
48
173-179
1994
Homo sapiens
Manually annotated by BRENDA team
Muszynska, A.; Wolczynski, S.; Palka, J.
The mechanism for anthracycline-induced inhibition of collagen biosynthesis
Eur. J. Pharmacol.
411
17-25
2001
Homo sapiens
Manually annotated by BRENDA team
Karna, E.; Palka, J.; Wolczynski, S.
Doxycycline-induced inhibition of prolidase activity in human skin fibroblasts and its involvement in impaired collagen biosynthesis
Eur. J. Pharmacol.
430
25-31
2001
Homo sapiens
Manually annotated by BRENDA team
Araki, H.; Li, Y.; Yamamoto, Y.; Haneda, M.; Nishi, K.; Kikkawa, R.; Ohkubo, I.
Purification, molecular cloning, and immunohistochemical localization of dipeptidyl peptidase II from the rat kidney and its identity with quiescent cell proline dipeptidase
J. Biochem.
129
279-288
2001
Homo sapiens
Manually annotated by BRENDA team
Chiravuri, M.; Lee, H.; Mathieu, S.L.; Huber, B.T.
Homodimerization via a leucine zipper motif is required for enzymatic activity of quiescent cell proline dipeptidase
J. Biol. Chem.
275
26994-26999
2000
Homo sapiens
Manually annotated by BRENDA team
Chiravuri, M.; Agarraberes, F.; Mathieu, S.L.; Lee, H.; Huber, B.T.
Vesicular localization and characterization of a novel post-proline-cleaving aminodipeptidase, quiescent cell proline dipeptidase
J. Immunol.
165
5695-5702
2000
Homo sapiens
Manually annotated by BRENDA team
Surazynski, A.; Palka, J.; Wolczynski, S.
Phosphorylation of prolidase increases the enzyme activity
Mol. Cell. Biochem.
220
95-101
2001
Homo sapiens
Manually annotated by BRENDA team
Wang, W.; Liu, G.; Yamashita, K.; Manabe, M.; Kodama, H.
Characteristics of prolinase against various iminodipeptides in erythrocyte lysates from a normal human and a patient with prolidase deficiency
Clin. Chem. Lab. Med.
42
1102-1108
2004
Homo sapiens
Manually annotated by BRENDA team
Wang, S.H.; Liu, M.; Chi, M.G.; Wang, Q.D.; Sun, M.J.
Production of human liver prolidase by Saccharomyces cerevisiae as host cells
Acta Pharmacol. Sin.
25
794-800
2004
Homo sapiens
Manually annotated by BRENDA team
Wang, H.; Kurien, B.T.; Lundgren, D.; Patel, N.C.; Kaufman, K.M.; Miller, D.L.; Porter, A.C.; DSouza, A.; Nye, L.; Tumbush, J.; Hupertz, V.; Kerr, D.S.; Kurono, S.; Matsumoto, H.; Scofield, R.H.
A nonsense mutation of PEPD in four Amish children with prolidase deficiency
Am. J. Med. Genet. A
140
580-585
2006
Homo sapiens
Manually annotated by BRENDA team
Cauci, S.; McGregor, J.; Thorsen, P.; Grove, J.; Guaschino, S.
Combination of vaginal pH with vaginal sialidase and prolidase activities for prediction of low birth weight and preterm birth
Am. J. Obstet. Gynecol.
192
489-496
2005
Homo sapiens
Manually annotated by BRENDA team
Verit, F.F.; Geyikli, I.; Yazgan, P.; Celik, A.
Correlations of serum prolidase activity between bone turnover markers and mineral density in postmenopausal osteoporosis
Arch. Gynecol. Obstet.
274
133-137
2006
Homo sapiens
Manually annotated by BRENDA team
Wang, S.H.; Zhi, Q.W.; Sun, M.J.
Purification and characterization of recombinant human liver prolidase expressed in Saccharomyces cerevisiae
Arch. Toxicol.
79
253-259
2005
Homo sapiens
Manually annotated by BRENDA team
Lupi, A.; Rossi, A.; Vaghi, P.; Gallanti, A.; Cetta, G.; Forlino, A.
N-benzyloxycarbonyl-L-proline: An in vitro and in vivo inhibitor of prolidase
Biochim. Biophys. Acta
1744
157-163
2005
Homo sapiens, Mus musculus
Manually annotated by BRENDA team
Duong, H.S.; Zhang, Q.Z.; Le, A.D.; Kelly, A.P.; Kamdar, R.; Messadi, D.V.
Elevated prolidase activity in keloids: correlation with type I collagen turnover
Br. J. Dermatol.
154
820-828
2006
Homo sapiens
Manually annotated by BRENDA team
Liu, G.; Nakayama, K.; Sagara, Y.; Awata, S.; Yamashita, K.; Manabe, M.; Kodama, H.
Characterization of prolidase activity in erythrocytes from a patient with prolidase deficiency: comparison with prolidase I and II purified from normal human erythrocytes
Clin. Biochem.
38
625-631
2005
Homo sapiens
Manually annotated by BRENDA team
Liu, G.; Nakayama, K.; Awata, S.; Wang, W.; Yamashita, K.; Manabe, M.; Kodama, H.
Effects of amino acids and its metabolites on prolidase activity against various iminodipeptides in erythrocytes from normal human and a patient with prolidase deficiency
Clin. Chim. Acta
350
211-217
2004
Homo sapiens
Manually annotated by BRENDA team
Lupi, A.; De Riso, A.; Torre, S.D.; Rossi, A.; Campari, E.; Vilarinho, L.; Cetta, G.; Forlino, A.
Characterization of a new PEPD allele causing prolidase deficiency in two unrelated patients: natural-occurrent mutations as a tool to investigate structure-function relationship
J. Hum. Genet.
49
500-506
2004
Homo sapiens
Manually annotated by BRENDA team
Surazynski, A.; Sienkiewicz, P.; Wolczynski, S.; Palka, J.
Differential effects of echistatin and thrombin on collagen production and prolidase activity in human dermal fibroblasts and their possible implication in beta1-integrin-mediated signaling
Pharm. Res.
51
217-221
2005
Homo sapiens
Manually annotated by BRENDA team
Wang, S.H.; Zhi, Q.W.; Sun, M.J.
Dual activities of human prolidase
Toxicol. In Vitro
20
71-77
2006
Homo sapiens
Manually annotated by BRENDA team
Uramatsu, M.; Liu, G.; Uramatsu, S.; Zhang, M.; Wang, W.; Nakayama, K.; Manabe, M.; Kodama, H.
Different effects of sulfur amino acids on prolidase and prolinase activity in normal and prolidase-deficient human erythrocytes
Clin. Chim. Acta
375
129-135
2007
Homo sapiens
Manually annotated by BRENDA team
Lee, H.J.; Chen, Y.S.; Chou, C.Y.; Chien, C.H.; Lin, C.H.; Chang, G.G.; Chen, X.
Investigation of the dimer interface and substrate specificity of prolyl dipeptidase DPP8
J. Biol. Chem.
281
38653-38662
2006
Homo sapiens
Manually annotated by BRENDA team
Lupi, A.; Tenni, R.; Rossi, A.; Cetta, G.; Forlino, A.
Human prolidase and prolidase deficiency: an overview on the characterization of the enzyme involved in proline recycling and on the effects of its mutations
Amino Acids
35
739-752
2008
Homo sapiens, Pyrococcus furiosus
Manually annotated by BRENDA team
Son, E.D.; Choi, G.H.; Kim, H.; Lee, B.; Chang, I.S.; Hwang, J.S.
Alpha-ketoglutarate stimulates procollagen production in cultured human dermal fibroblasts, and decreases UVB-induced wrinkle formation following topical application on the dorsal skin of hairless mice
Biol. Pharm. Bull.
30
1395-1399
2007
Homo sapiens
Manually annotated by BRENDA team
Buszman, E.; Wrzesniok, D.; Surazynski, A.; Patka, J.; Moleda, K.
Effect of melanin on netilmicin-induced inhibition of collagen biosynthesis in human skin fibroblasts
Bioorg. Med. Chem.
14
8155-8161
2006
Homo sapiens
Manually annotated by BRENDA team
Ipcioglu, O.M.; Ozcan, O.; Gultepe, M.; Deniz, O.; Akgul, E.O.
Prolidase activity in serum and pleural fluids in patients with tuberculous pleural effussion
Clin. Biochem.
41
670-675
2008
Homo sapiens
Manually annotated by BRENDA team
Yuan, J.; Wei, H.; Jin, W.; Yang, X.; Wang, E.
Kinetic study of paracetamol on prolidase activity in erythrocytes by capillary electrophoresis with Ru(bpy)3 2+ electrochemiluminescence detection
Electrophoresis
27
4047-4051
2006
Homo sapiens
Manually annotated by BRENDA team
Lupi, A.; Della Torre, S.; Campari, E.; Tenni, R.; Cetta, G.; Rossi, A.; Forlino, A.
Human recombinant prolidase from eukaryotic and prokaryotic sources. Expression, purification, characterization and long-term stability studies
FEBS J.
273
5466-5478
2006
Homo sapiens
Manually annotated by BRENDA team
Cechowska-Pasko, M.; Palka, J.; Wojtukiewicz, M.Z.
Enhanced prolidase activity and decreased collagen content in breast cancer tissue
Int. J. Exp. Pathol.
87
289-296
2006
Homo sapiens
Manually annotated by BRENDA team
Galicka, A.; Nazaruk, J.
Stimulation of collagen biosynthesis by flavonoid glycosides in skin fibroblasts of osteogenesis imperfecta type I and the potential mechanism of their action
Int. J. Mol. Med.
20
889-895
2007
Homo sapiens
Manually annotated by BRENDA team
Miltyk, W.; Karna, E.; Palka, J.A.
Prolidase-independent mechanism of camptothecin-induced inhibition of collagen biosynthesis in cultured human skin fibroblasts
J. Biochem.
141
287-292
2007
Homo sapiens
Manually annotated by BRENDA team
Karna, E.; Miltyk, W.; Surazynski, A.; Patka, J.A.
Protective effect of hyaluronic acid on interleukin-1-induced deregulation of beta1-integrin and insulin-like growth factor-I receptor signaling and collagen biosynthesis in cultured human chondrocytes
Mol. Cell. Biochem.
308
57-64
2008
Homo sapiens
Manually annotated by BRENDA team
Citak Kurt, A.N.; Ustundag, B.; Akarsu, S.; Kurt, A.; Yilmaz, E.; Ocal, C.; Aygun, A.D.
Cord blood prolidase activity correlates with gestational age and birth weight
Neonatology
94
110-112
2008
Homo sapiens
Manually annotated by BRENDA team
Mittal, S.; Song, X.; Vig, B.S.; Amidon, G.L.
Proline prodrug of melphalan targeted to prolidase, a prodrug activating enzyme overexpressed in melanoma
Pharm. Res.
24
1290-1298
2007
Homo sapiens, Sus scrofa
Manually annotated by BRENDA team
Uramatsu, S.; Liu, G.; Yang, Q.; Uramatsu, M.; Chi, H.; Lu, J.; Yamashita, K.; Kodama, H.
Characterization of prolidase I and II purified from normal human erythrocytes: comparison with prolidase in erythrocytes from a patient with prolidase deficiency
Amino Acids
37
543-551
2009
Homo sapiens
Manually annotated by BRENDA team
Rabus, M.; Demirbag, R.; Yildiz, A.; Tezcan, O.; Yilmaz, R.; Ocak, A.R.; Alp, M.; Erel, O.; Aksoy, N.; Yakut, C.
Association of prolidase activity, oxidative parameters, and presence of atrial fibrillation in patients with mitral stenosis
Arch. Med. Res.
39
519-524
2008
Homo sapiens
Manually annotated by BRENDA team
Dunn, R.; Dolianitis, C.
Prolidase deficiency: the use of topical proline for treatment of leg ulcers
Australas. J. Dermatol.
49
237-238
2008
Homo sapiens
Manually annotated by BRENDA team
Yildiz, A.; Demirbag, R.; Yilmaz, R.; Gur, M.; Altiparmak, I.H.; Akyol, S.; Aksoy, N.; Ocak, A.R.; Erel, O.
The association of serum prolidase activity with the presence and severity of coronary artery disease
Coron. Artery Dis.
19
319-325
2008
Homo sapiens
Manually annotated by BRENDA team
Kayadibi, H.; Gueltepe, M.; Yasar, B.; Ince, A.T.; Ozcan, O.; Ipcioglu, O.M.; Kurdas, O.O.; Bolat, B.; Benek, Y.Z.; Guveli, H.; Atalay, S.; Ozkara, S.; Keskin, O.
Diagnostic value of serum prolidase enzyme activity to predict the liver histological lesions in non-alcoholic fatty liver disease: A surrogate marker to distinguish steatohepatitis from simple steatosis
Digest. Dis. Sci.
54
1764-1771
2008
Homo sapiens
Manually annotated by BRENDA team
Colonna, C.; Conti, B.; Perugini, P.; Pavanetto, F.; Modena, T.; Dorati, R.; Iadarola, P.; Genta, I.
Ex vivo evaluation of prolidase loaded chitosan nanoparticles for the enzyme replacement therapy
Eur. J. Pharm. Biopharm.
70
58-65
2008
Homo sapiens
Manually annotated by BRENDA team
Zhou, L.; Yuan, J.; Yin, J.; Wang, E.
Kinetic study of prolidase activity in erythrocytes against different substrates using capillary electrophoresis with electrochemiluminescence detection
J. Chromatogr. A
1200
255-259
2008
Homo sapiens
Manually annotated by BRENDA team
Cakmak, A.; Zeyrek, D.; Atas, A.; Celik, H.; Aksoy, N.; Erel, O.
Serum prolidase activity and oxidative status in patients with bronchial asthma
J. Clin. Lab. Anal.
23
132-138
2009
Homo sapiens
Manually annotated by BRENDA team
Bielawski, K.; Bielawska, A.; S?odownik, T.; Bo?kun-Skornicka, U.; Muszy?ska, A.
Proline-linked nitrosoureas as prolidase-convertible prodrugs in human breast cancer cells
Pharmacol. Rep.
60
171-182
2008
Homo sapiens, Sus scrofa
Manually annotated by BRENDA team
Theriot, C.M.; Tove, S.R.; Grunden, A.M.
Biotechnological applications of recombinant microbial prolidases
Adv. Appl. Microbiol.
68
99-132
2009
Alteromonas sp., Alteromonas sp. JD6.5, Cavia porcellus, Homo sapiens, Lacticaseibacillus casei, Lacticaseibacillus casei IFPL 731, Lactobacillus delbrueckii, Lactococcus lactis, Pyrococcus furiosus, Stenotrophomonas maltophilia
Manually annotated by BRENDA team
Falik-Zaccai, T.; Khayat, M.; Luder, A.; Frenkel, P.; Magen, D.; Brik, R.; Gershoni-Baruch, R.; Mandel, H.
A broad spectrum of developmental delay in a large cohort of prolidase deficiency patients demonstrates marked interfamilial and intrafamilial phenotypic variability
Am. J. Med. Genet. B Neuropsychiatr. Genet.
153
46-56
2010
Homo sapiens
Manually annotated by BRENDA team
Vural, M.; Toy, H.; Camuzcuoglu, H.; Aksoy, N.
Comparison of prolidase enzyme activities of maternal serum and placental tissue in patients with early pregnancy failure
Arch. Gynecol. Obstet.
283
953-958
2011
Homo sapiens
Manually annotated by BRENDA team
Besio, R.; Alleva, S.; Forlino, A.; Lupi, A.; Meneghini, C.; Minicozzi, V.; Profumo, A.; Stellato, F.; Tenni, R.; Morante, S.
Identifying the structure of the active sites of human recombinant prolidase
Eur. Biophys. J.
39
935-945
2010
Homo sapiens (P12955), Homo sapiens
Manually annotated by BRENDA team
Camuzcuoglu, H.; Arioz, D.T.; Toy, H.; Kurt, S.; Celik, H.; Aksoy, N.
Assessment of preoperative serum prolidase activity in epithelial ovarian cancer
Eur. J. Obstet. Gynecol. Reprod. Biol.
147
97-100
2009
Homo sapiens
Manually annotated by BRENDA team
Klar, A.; Navon-Elkan, P.; Rubinow, A.; Branski, D.; Hurvitz, H.; Christensen, E.; Khayat, M.; Falik-Zaccai, T.C.
Prolidase deficiency: it looks like systemic lupus erythematosus but it is not
Eur. J. Pediatr.
169
727-732
2010
Homo sapiens
Manually annotated by BRENDA team
Vural, M.; Camuzcuoglu, H.; Toy, H.; Aksoy, N.
Amniotic fluid prolidase activity and oxidative status in neural tube defects
Fetal. Diagn. Ther.
28
34-39
2010
Homo sapiens
Manually annotated by BRENDA team
Toy, H.; Camuzcuoglu, H.; Camuzcuoglu, A.; Celik, H.; Aksoy, N.
Decreased serum prolidase activity and increased oxidative stress in early pregnancy loss
Gynecol. Obstet. Invest.
69
122-127
2010
Homo sapiens
Manually annotated by BRENDA team
Savas, M.; Yeni, E.; Celik, H.; Ciftci, H.; Utangac, M.; Oncel, H.; Altunkol, A.; Verit, A.
The association of serum prolidase activity and erectile dysfunction
J. Androl.
31
146-154
2010
Homo sapiens
Manually annotated by BRENDA team
Horoz, M.; Aslan, M.; Bolukbas, F.F.; Bolukbas, C.; Nazligul, Y.; Celik, H.; Aksoy, N.
Serum prolidase enzyme activity and its relation to histopathological findings in patients with non-alcoholic steatohepatitis
J. Clin. Lab. Anal.
24
207-211
2010
Homo sapiens
Manually annotated by BRENDA team
Cakmak, A.; Soker, M.; Koc, A.; Aksoy, N.
Prolidase activity and oxidative status in patients with thalassemia major
J. Clin. Lab. Anal.
24
6-11
2010
Homo sapiens
Manually annotated by BRENDA team
Toy, H.; Camuzcuoglu, H.; Arioz, D.T.; Kurt, S.; Celik, H.; Aksoy, N.
Serum prolidase activity and oxidative stress markers in pregnancies with intrauterine growth restricted infants
J. Obstet. Gynaecol. Res.
35
1047-1053
2009
Homo sapiens
Manually annotated by BRENDA team
Karna, E.; Szoka, L.; Palka, J.A.
Betulinic acid inhibits the expression of hypoxia-inducible factor 1alpha and vascular endothelial growth factor in human endometrial adenocarcinoma cells
Mol. Cell. Biochem.
340
15-20
2010
Homo sapiens
Manually annotated by BRENDA team
Akcakoyun, M.; Pala, S.; Esen, O.; Acar, G.; Kargin, R.; Emiroglu, Y.; Tigen, K.; Ozcan, O.; Ipcioglu, O.M.; Esen, A.M.
Dilatation of the ascending aorta is associated with low serum prolidase activity
Tohoku J. Exp. Med.
220
273-277
2010
Homo sapiens
Manually annotated by BRENDA team