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1,5-alpha-L-arabinan + H2O
?
Abn2, together with previously characterized AbnA, is responsible for the majority of the extracellular arabinan activity in Bacillus subtilis. Abn2 is monocistronic, and its expression is driven from two different promoters
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-
?
1,5-alpha-L-arabinan + H2O
oligo-alpha-(1->5)-L-arabinoside + L-arabinose
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-
-
?
apple pectin + H2O
?
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-
-
?
linear 1,5-alpha-L-arabinan + H2O
L-arabinose + ?
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-
?
red debranched arabinan + H2O
?
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?
sugar beet arabinan + H2O
?
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?
sugar beet arabinan + H2O
oligo-alpha-(1->5)-L-arabinoside + L-arabinose
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?
1,5-alpha-L-arabinan + H2O
?
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-
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?
1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara
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i.e. debranched arabinan
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-
?
1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + L-arabinose
1,5-alpha-L-arabinan + H2O
L-arabinose + alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara
cell wall polysaccharide + H2O
arabinose + galactose + rhamnose + fucose
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F-11, apple
F-11, 34.3% arabinose + 10% galactose + 2.6% rhamnose/fucose
?
cell wall polysaccharide + H2O
L-arabinan
L-arabinan + H2O
L-arabino-oligosaccharides
linear 1,5-alpha-L-arabinan + H2O
L-arabinose + ?
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?
sugar beet arabinan + H2O
L-arabinose + ?
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?
additional information
?
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1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + L-arabinose
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-
-
-
?
1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + L-arabinose
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-
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?
1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + L-arabinose
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F-11 and IFO 3022: best substrate, endo mechanism
end-product
?
1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + L-arabinose
-
F-11 best substrate
end-product, F-11: releases arabinose, arabinobiose, arabinotriose and higher oligosaccharides during hydrolysis, end-product are arabinose and arabinobiose
?
1,5-alpha-L-arabinan + H2O
alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + L-arabinose
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IFO 3134, linear 1,5-alpha-L-arabinan
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-
?
1,5-alpha-L-arabinan + H2O
L-arabinose + alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara
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F-11 and IFO 3022: best substrate, endo mechanism
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-
?
1,5-alpha-L-arabinan + H2O
L-arabinose + alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara
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F-11 best substrate
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-
?
1,5-alpha-L-arabinan + H2O
L-arabinose + alpha-L-arabinopyranosyl-(1-5)-O-alpha-L-arabinopyranose + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara + alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara-(1-5)-O-alpha-L-Ara
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IFO 3022, best substrate
IFO 3022
?
cell wall polysaccharide + H2O
L-arabinan
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-
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?
cell wall polysaccharide + H2O
L-arabinan
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F-11, primary cell wall polysaccharides
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?
cell wall polysaccharide + H2O
L-arabinan
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F-11, sycamore
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?
cell wall polysaccharide + H2O
L-arabinan
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F-11, sycamore
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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branched and partially debranched arabinan
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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sugar beet pulp
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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sugar-beet arabinan in commercial apple juice concentrate
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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beet arabinan
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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beet arabinan
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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beet arabinan
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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beet arabinan
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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random hydrolysis of L-arabinan
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?
L-arabinan + H2O
L-arabino-oligosaccharides
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random hydrolysis of L-arabinan
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?
protopectin + H2O
pectin
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IFO 3134, protopectin of sugar beet pulp and various citrus fruit peels, but much less on that from lemon peel
IFO 3134, highly polymerized pectin
?
protopectin + H2O
pectin
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IFO 3134, protopectin of sugar-beet and apple pulp
IFO 3134, soluble pectin
?
additional information
?
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shows no activity toward larchwood arabinogalactan, wheat arabinoxylan, and p-nitrophenyl-alpha-L-arabinofuranoside
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?
additional information
?
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shows no activity toward larchwood arabinogalactan, wheat arabinoxylan, and p-nitrophenyl-alpha-L-arabinofuranoside
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?
additional information
?
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IFO 3022: potato disc macerating activity, able to loosen potato tissue
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?
additional information
?
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IFO 3022: potato disc macerating activity, able to loosen potato tissue
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?
additional information
?
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IFO 3022: inactive on p-nitrophenyl alpha-L-arabinofuranoside, p-nitrophenyl alpha-D-galactopyranoside, p-nitrophenyl beta-D-galactopyranoside, arabinogalactan, carboxymethyl cellulose, filter paper, pectin and polygalacturonic acid
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?
additional information
?
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F-11: inactive on phenyl alpha-L-arabinofuranoside, p-nitrophenyl alpha-D-galactopyranoside, p-nitrophenyl beta-D-galactopyranoside, arabinoxylan, arabinogalactan and gum arabic
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?
additional information
?
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IFO 3134, inactive on polygalacturonic acid and soluble pectin
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?
additional information
?
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F-11, substrate specificity
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?
additional information
?
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inactive towards phenyl and p-nitrophenyl alpha-L-arabinofuranoside, arabinoxylan, arabinogalactan, and gum arabic
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?
additional information
?
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F-11, inactive on potato galactan
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?
additional information
?
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plays a role in degradation of plant tissues, macerating enzyme
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?
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Voragen, A.G.J.; Geerst, F.; Pilnik, W.
Hemi-cellulases in enzymic fruit processing
Util. Enzymes Technol. Aliment. , Symp. Int. (Dupuy, P. , ed. ), Tech. Doc. Lavoisier Paris
497-502
1982
Bacillus subtilis, Bacillus subtilis F-11
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brenda
Kaji, A.
L-Arabinosidases
Adv. Carbohydr. Chem. Biochem.
42
383-394
1984
Bacillus subtilis, Bacillus subtilis F-11, Clostridium felsineum var. sikokianum
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brenda
Kaji, A.; Saheki, T.
endo-Arabinanase from Bacillus subtilis F-11
Biochim. Biophys. Acta
410
354-360
1975
Bacillus subtilis, Bacillus subtilis F-11
brenda
Yoshihara, O.; Kaji, A.
An endo-1,5-alpha-L-arabinase, which can disintegrate potato tissue
Agric. Biol. Chem.
47
1935-1940
1983
Bacillus subtilis
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brenda
Weinstein, L.; Albersheim, P.
Structure of plant cell walls. IX. Purification and partial characterization of a wall-degrading endo-arabanase and an arabinosidase from Bacillus subtilis
Plant Physiol.
63
425-432
1979
Bacillus subtilis, Bacillus subtilis F-11
brenda
Sakamoto, T.; Yamada, M.; Kawasaki, H.; Sakai, T.
Molecular cloning and nucleotide sequence of an endo-1,5-alpha-L-arabinase gene from Bacillus subtilis
Eur. J. Biochem.
245
708-714
1997
Bacillus subtilis
brenda
Sakai, T.; Sakamoto, T.
Purification and some properties of a protopectin-solubilizing enzyme that has potent activity on sugar beet protopectin
Agric. Biol. Chem.
54
879-889
1990
Bacillus subtilis
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brenda
Raposo, M.P.; Inacio, J.M.; Mota, L.J.; de Sa-Nogueira, I.
Transcriptional regulation of genes encoding arabinan-degrading enzymes in Bacillus subtilis
J. Bacteriol.
186
1287-1296
2004
Bacillus subtilis
brenda
Leal, T.L.; de Sa-Nogueira I.
Purification, characterization and functional analysis of an endo-arabinanase (AbnA) from Bacillus subtilis
FEMS Microbiol. Lett.
241
41-48
2004
Bacillus subtilis
brenda
de Sanctis, D.; Bento, I.; Inacio, J.M.; Custodio, S.; de Sa-Nogueira, I.; Carrondo, M.A.
Overproduction, crystallization and preliminary X-ray characterization of Abn2, an endo-1,5-alpha-arabinanase from Bacillus subtilis
Acta Crystallogr. Sect. F
64
636-638
2008
Bacillus subtilis (P42293), Bacillus subtilis
brenda
Inacio, J.M.; de Sa-Nogueira, I.
Characterization of abn2 (yxiA), encoding a Bacillus subtilis GH43 arabinanase, Abn2, and its role in arabino-polysaccharide degradation
J. Bacteriol.
190
4272-4280
2008
Bacillus subtilis (P42293), Bacillus subtilis, Bacillus subtilis 168T+ (P42293)
brenda
de Sanctis, D.; Inacio, J.M.; Lindley, P.F.; de Sa-Nogueira, I.; Bento, I.
New evidence for the role of calcium in the glycosidase reaction of GH43 arabinanases
FEBS J.
277
4562-4574
2010
Bacillus subtilis (P42293)
brenda
McVey, C.E.; Ferreira, M.J.; Correia, B.; Lahiri, S.; de Sanctis, D.; Carrondo, M.A.; Lindley, P.F.; de Sa Nogueira, I.; Soares, C.M.; Bento, I.
The importance of the Abn2 calcium cluster in the endo-1,5-arabinanase activity from Bacillus subtilis
J. Biol. Inorg. Chem.
19
505-513
2014
Bacillus subtilis (P42293), Bacillus subtilis, Bacillus subtilis 168 (P42293)
brenda