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Information on EC 3.2.1.22 - alpha-galactosidase and Organism(s) Thermotoga maritima and UniProt Accession O33835

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IUBMB Comments
Also hydrolyses alpha-D-fucosides.
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This record set is specific for:
Thermotoga maritima
UNIPROT: O33835
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Word Map
The taxonomic range for the selected organisms is: Thermotoga maritima
The enzyme appears in selected viruses and cellular organisms
Synonyms
alpha-galactosidase, alpha-galactosidase a, alpha-gal, alpha-gal a, agalsidase alfa, genzyme, alpha-d-galactosidase, a-galactosidase, fabrazyme, alpha-galactosidase i, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
GALA
O33835
-
GH36 alpha-galactosidase
O33835
-
Tm GalA
O33835
-
Agalsidase alfa
-
-
-
-
alpha-D-galactosidase
-
-
-
-
Alpha-D-galactoside galactohydrolase
-
-
-
-
alpha-galactosidase A
-
-
-
-
alpha-galactoside galactohydrolase
-
-
-
-
ceramidase, galactosylgalactosylglucosyl-
-
-
-
-
ceramide trihexosidase
-
-
-
-
ceramidetrihexosidase
-
-
-
-
ceramidetrihexoside-alpha-galactosidase
-
-
-
-
melibiase
-
-
-
-
TmGalA
trihexosyl ceramide galactosidase
-
-
-
-
trihexosylceramide alpha-galactosidase
-
-
-
-
trihexosylceramidealpha-galactosidase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of O-glycosyl bond
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
alpha-D-galactoside galactohydrolase
Also hydrolyses alpha-D-fucosides.
CAS REGISTRY NUMBER
COMMENTARY hide
9023-01-2
-
9025-35-8
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
2,4-dinitrophenyl alpha-D-galactoside + H2O
2,4-dinitrophenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
2,5-dinitrophenyl alpha-D-galactoside + H2O
2,5-dinitrophenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
2-nitrophenyl alpha-D-galactoside + H2O
2-nitrophenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
3,4-dimethylphenyl alpha-D-galactoside + H2O
3,4-dimethylphenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
3-nitrophenyl alpha-D-galactoside + H2O
3-nitrophenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
4-bromophenyl alpha-D-galactoside + H2O
4-bromophenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
4-methoxyphenyl alpha-D-galactoside + H2O
4-methoxyphenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
4-nitrophenyl alpha-D-galactoside + H2O
4-nitrophenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
beta-naphthyl alpha-D-galactoside + H2O
beta-naphthol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
phenyl alpha-D-galactoside + H2O
phenol + alpha-D-galactose
show the reaction diagram
O33835
-
-
-
?
4-nitrophenyl alpha-D-galactopyranoside + H2O
4-nitrophenol + D-galactopyranose
show the reaction diagram
melibiose + H2O
D-galactose + alpha-D-glucose
show the reaction diagram
-
-
-
-
?
o-nitrophenyl alpha-D-galactopyranoside + H2O
o-nitrophenol + alpha-D-galactose
show the reaction diagram
-
-
-
-
?
p-nitrophenyl alpha-D-galactopyranoside + H2O
p-nitrophenol + alpha-D-galactose
show the reaction diagram
-
-
-
-
?
raffinose + H2O
sucrose + alpha-D-galactose
show the reaction diagram
-
-
-
-
?
stachyose + 2 H2O
2 alpha-D-galactose + sucrose
show the reaction diagram
-
20fold less active than with raffinose
-
-
?
verbascose + H2O
alpha-D-galactose + alpha-D-glucopyranosyl-(1,2)-beta-D-fructofuranoside
show the reaction diagram
-
20fold less active than with raffinose
-
-
?
additional information
?
-
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
CuCl2
-
1 mM, 50% inhibition
FeCl2
-
1 mM, 50% inhibition
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
microwave
O33835
microwave irradiation (300 W) significantly stimulates activity
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.037 - 0.135
2,4-dinitrophenyl alpha-D-galactoside
0.143 - 0.243
2,5-dinitrophenyl alpha-D-galactoside
0.133 - 0.143
2-nitrophenyl alpha-D-galactoside
0.086 - 0.089
3,4-dimethylphenyl alpha-D-galactoside
0.096 - 0.14
3-nitrophenyl alpha-D-galactoside
0.104 - 0.111
4-bromophenyl alpha-D-galactoside
0.08 - 0.083
4-nitrophenyl alpha-D-galactoside
0.048 - 0.088
4-O-methylphenyl alpha-D-galactoside
0.039 - 0.225
beta-naphthyl alpha-D-galactoside
0.176 - 0.324
phenyl alpha-D-galactoside
0.04 - 0.43
4-nitrophenyl alpha-D-galactopyranoside
0.075
p-nitrophenyl alpha-D-galactopyranoside
-
pH 5, 75°C
0.08
p-nitrophenyl alpha-D-galactoside
-
-
2.1
raffinose
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.085 - 12.23
2,4-dinitrophenyl alpha-D-galactoside
0.042 - 11.2
2,5-dinitrophenyl alpha-D-galactoside
0.035 - 13.67
2-nitrophenyl alpha-D-galactoside
0.01 - 10.39
3,4-dimethylphenyl alpha-D-galactoside
0.042 - 10.5
3-nitrophenyl alpha-D-galactoside
0.016 - 12.58
4-bromophenyl alpha-D-galactoside
0.03 - 8.58
4-nitrophenyl alpha-D-galactoside
0.01 - 6.69
4-O-methylphenyl alpha-D-galactoside
0.021 - 6.26
beta-naphthyl alpha-D-galactoside
0.027 - 5.71
phenyl alpha-D-galactoside
0.06 - 65
4-nitrophenyl alpha-D-galactopyranoside
176
p-nitrophenyl alpha-D-galactopyranoside
-
pH 5, 75°C
109
raffinose
-
pH 5, 75°C
additional information
phenyl alpha-D-galactoside
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.6 - 1585
4-nitrophenyl alpha-D-galactopyranoside
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.5 - 7
-
more than 50% of maximal activity at pH 4.5 and pH 7.0, at 75°C
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
75 - 95
-
more than 50% of maximal activity at 75°C and at 95°C, at pH 5
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
O33835
Uniprot
Manually annotated by BRENDA team
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
125000
-
gel filtration
62000
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
x * 60000, wild type enzyme and its mutants W85Y, F194K, L195C, F328A, P402D, P402S, and G385L, SDS-PAGE
dimer
-
2 * 62000, SDS-PAGE
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D220A
O33835
exhibits less than 1% of the wild-type enzyme activity
D327A
O33835
exhibits less than 1% of the wild-type enzyme activity
D327G
O33835
mutant has a 200-800fold lower catalytic rate on aryl galactosides relative to the wild type enzyme
D387A
O33835
exhibits less than 1% of the wild-type enzyme activity
D387G
O33835
mutant is 1500fold catalytically slower than the wild type enzyme on p-nitrophenyl alpha-D-galactopyranoside, and exhibits higher activity with increasing pH
D327G
the mutant is an efficient alpha-galactosynthase producing different galactosylated disaccharides from beta-galactosyl-azide donors and 4-nitrophenyl-alpha-and beta-glycosides as acceptors
F328A
transglycosylation is markedly increased compared to wild-type enzyme. kcat/Km value is more than twofold lower than for the wild type enzyme. 16-fold higher yield of products with the (alpha1,2)-bond as compared to products produced by the wild type enzyme
G385L
transglycosylation is markedly increased compared to wild-type enzyme. Mutation G385L results in a twofold decrease in the specific activity of the enzyme during its purification. The kinetic parameters are not determined for the mutant G385L due to its instability
L195C
kcat/Km value is more than twofold lower than for the wild type enzyme
P402D
transglycosylation is markedly increased compared to wild-type enzyme. kcat/Km value is more than twofold lower than for the wild type enzyme. 4-fold higher yield of products with the (alpha1,2)-bond as compared to products produced by the wild type enzyme
P402S
no significant changes in the kinetic parameters of hydrolysis
W85Y
no significant changes in the kinetic parameters of hydrolysis
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5 - 8
-
75°C, 50 mM citrate-phosphate buffer, less than 40% loss of activity after 5 h
656702
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
89.8
O33835
melting temperature of the wild type enzyme
75
-
pH 7, 20 mM Tris-HCl buffer, 1 mg/ml protein concentration, 50% loss of activity after 7 days
80
-
pH 7, 20 mM Tris-HCl buffer, 1 mg/ml protein concentration, 50% loss of activity after 48 h
85
-
pH 7, 20 mM Tris-HCl buffer, 1 mg/ml protein concentration, 50% loss of activity after 6 h
90
-
pH 7, 20 mM Tris-HCl buffer, 1 mg/ml protein concentration, 50% loss of activity after 70 min
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL-21(DE3) cells
O33835
expression in Escherichia coli
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
synthesis
the mutant is an efficient alpha-galactosynthase producing different galactosylated disaccharides from beta-galactosyl-azide donors and 4-nitrophenyl-alpha-and beta-glycosides as acceptors
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Liebl, W.; Wagner, B.; Schellhase, J.
Properties of an alpha-Galactosidas, and structure of its gene galA, within an alpha- and beta-galactoside utilization gene cluster of the hyperthermophilic bacterium Thermotoga maritima
Syst. Appl. Microbiol.
21
1-11
1998
Thermotoga maritima
Manually annotated by BRENDA team
Miller, E.S.; Parker, K.N.; Liebl, W.; Lam, D.; Callem, W.; Snead, M.A.; mathur, E.J.; Short, J.M.; Kelly, R.M.
alpha-D-Galactosidases from Thermotoga species
Methods Enzymol.
330
246-260
2001
Thermotoga maritima, Thermotoga neapolitana, Thermotoga maritima DSM 3109, Thermotoga neapolitana DSM Z5068
Manually annotated by BRENDA team
Comfort, D.A.; Bobrov, K.S.; Ivanen, D.R.; Shabalin, K.A.; Harris, J.M.; Kulminskaya, A.A.; Brumer, H.; Kelly, R.M.
Biochemical analysis of Thermotoga maritima GH36 alpha-galactosidase (TmGalA) confirms the mechanistic commonality of clan GH-D glycoside hydrolases
Biochemistry
46
3319-3330
2007
Thermotoga maritima (O33835), Thermotoga maritima, Thermotoga maritima MSB8 / DSM 3109 / ATCC 43589 (O33835)
Manually annotated by BRENDA team
Young, D.D.; Nichols. J.; Kelly, R.M.; Deiters, A.
Microwave activation of enzymatic catalysis
J. Am. Chem. Soc.
130
10048-10049
2008
Thermotoga maritima (O33835)
Manually annotated by BRENDA team
Bobrov, K.; Borisova, A.; Eneyskaya, E.; Ivanen, D.; Shabalin, K.; Kulminskaya, A.; Rychkov, G.
Improvement of the efficiency of transglycosylation catalyzed by alpha-galactosidase from Thermotoga maritima by protein engineering
Biochemistry
78
1112-1123
2013
Thermotoga maritima (G4FEF4), Thermotoga maritima, Thermotoga maritima DSM 3109 (G4FEF4)
Manually annotated by BRENDA team
Cobucci-Ponzano, B.; Zorzetti, C.; Strazzulli, A.; Carillo, S.; Bedini, E.; Corsaro, M.; Comfort, D.; Kelly, R.; Rossi, M.; Moracci, M.
A novel alpha-D-galactosynthase from Thermotoga maritima converts beta-D-galactopyranosyl azide to alpha-galacto-oligosaccharides
Glycobiology
21
448-456
2011
Thermotoga maritima (G4FEF4), Thermotoga maritima DSM 3109 (G4FEF4)
Manually annotated by BRENDA team