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Information on EC 3.1.4.50 - glycosylphosphatidylinositol phospholipase D and Organism(s) Bos taurus and UniProt Accession P80109

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IUBMB Comments
This enzyme is also active when O-4 of the glucosamine is substituted by carrying the oligosaccharide that can link a protein to the structure. It therefore cleaves proteins from the lipid part of the glycosylphosphatidylinositol (GPI) anchors, but does so by hydrolysis, whereas glycosylphosphatidylinositol diacylglycerol-lyase (EC 4.6.1.14) does so by elimination. It acts on plasma membranes only after solubilization of the substrate with detergents or solvents, but it may act on intracellular membranes.
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Bos taurus
UNIPROT: P80109
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Word Map
The taxonomic range for the selected organisms is: Bos taurus
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria
Synonyms
gpi-pld, glycosylphosphatidylinositol-specific phospholipase d, gpld1, gpi-specific phospholipase d, glycosylphosphatidylinositol phospholipase d, pi-g pld, phosphatidylinositol-specific phospholipase d, glycosylphosphatidylinositol-phospholipase d, glycoprotein phospholipase d, phosphatidylinositol phospholipase d, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
GPI-specific phospholipase D
-
glycoprotein phospholipase D
-
-
-
-
glycosylphosphatidylinositol-specific phospholipase D
-
-
GPI-PLD
-
-
-
-
phosphatidylinositol phospholipase D
-
-
-
-
phosphatidylinositol-specific phospholipase D
-
-
-
-
phospholipase D
-
-
phospholipase D, phosphatidylinositol
-
-
-
-
PI-G PLD
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of phosphoric diester
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
glycoprotein-phosphatidylinositol phosphatidohydrolase
This enzyme is also active when O-4 of the glucosamine is substituted by carrying the oligosaccharide that can link a protein to the structure. It therefore cleaves proteins from the lipid part of the glycosylphosphatidylinositol (GPI) anchors, but does so by hydrolysis, whereas glycosylphosphatidylinositol diacylglycerol-lyase (EC 4.6.1.14) does so by elimination. It acts on plasma membranes only after solubilization of the substrate with detergents or solvents, but it may act on intracellular membranes.
CAS REGISTRY NUMBER
COMMENTARY hide
113756-14-2
-
127737-50-2
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
2-O-alpha-D-galactosaminyl-1-phosphatidyl-D-chiro-inositol + H2O
?
show the reaction diagram
-
-
-
-
?
2-O-alpha-D-glucosaminyl-1-phosphatidyl-D-chiro-inositol + H2O
?
show the reaction diagram
-
-
-
-
?
3-O-alpha-D-galactosaminyl-2-phosphatidyl-L-chiro-inositol + H2O
?
show the reaction diagram
-
-
-
-
?
3-O-alpha-D-glycosaminyl-2-phosphatidyl-L-chiro-inositol + H2O
?
show the reaction diagram
-
-
-
-
?
6-O-alpha-D-glucosaminylphosphatidylinositol + H2O
?
show the reaction diagram
-
-
-
-
?
membrane form of variant-surface-glycoprotein + H2O
phosphatidic acid + variant-surface-glycoprotein inositol
show the reaction diagram
phosphatidylinositol + H2O
diacylglycerol + inositol phosphate
show the reaction diagram
-
-
-
-
?
Zn2+-glycerophosphocholine cholinephosphodiesterase, amphiphilic form + H2O
Zn2+-glycerophosphocholine cholinephosphodiesterase, hydrophilic form
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
membrane form of variant-surface-glycoprotein + H2O
phosphatidic acid + variant-surface-glycoprotein inositol
show the reaction diagram
-
-
-
?
additional information
?
-
-
overexpression of enzyme is lethal to wild-type cells, possibly by catalysing the overproduction of enzyme-derived toxic substances
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Zn2+
-
about 10 atoms per enzyme molecule
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1,10-phenanthroline
-
1,10-phenanthroline
Bicarbonate buffer
-
-
lipid A
-
-
lysophosphatidic acid
-
-
lysophosphatidylcholine
-
50% inhibition at 0.05 mM
phosphatidic acid
additional information
-
not inhibitory: myristoyl glycerol
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
monoacylglycerol
-
stimulates in a size-dependent manner, maximal enhancement with monodecanoylglycerol
monodecanoylglycerol
-
-
Nonidet P-40
-
stimulation
Trypsin
-
during cleavage enzymatic activity increases 3-4fold
-
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.6
-
-
7.4
-
assay at
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5 - 8
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
additional information
-
uptake of enzyme by neuroblastoma cells
-
Manually annotated by BRENDA team
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PHLD_BOVIN
839
0
92602
Swiss-Prot
Secretory Pathway (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
100000
-
gel filtration
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
sensitive to ionic detergents
-
stable over a range of 0.01-0.1% detergent, ionic detergents such as SDS are inhibitory, and bicarbonate buffer is inhibitory
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
overview
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Low, M.G.; Prasad, A.R.S.
A phospholipase D specific for the phosphatidylinositol anchor of cell-surface proteins is abundant in plasma
Proc. Natl. Acad. Sci. USA
85
980-984
1988
Bos taurus, Canis lupus familiaris, Equus caballus, Gallus gallus, Homo sapiens, Oryctolagus cuniculus, Rattus norvegicus
Manually annotated by BRENDA team
Deeg, M.A.; Davitz, M.A.
Glycosylphosphatidylinositol-phospholipase D: a tool for glycosylphosphatidylinositol structural analysis
Methods Enzymol.
250
630-640
1995
Bos taurus, Homo sapiens
Manually annotated by BRENDA team
Du, X.; Cai, J.; Zhou, J.Z.; Stevens, V.L.; Low, M.G.
Tolerance of glycosylphosphatidylinositol (GPI)-specific phospholipase D overexpression by Chinese hamster ovary cell mutants with aberrant GPI biosynthesis
Biochem. J.
361
113-118
2002
Bos taurus
Manually annotated by BRENDA team
Hari, T.; Buetikofer, P.; N.Wiesmann, U.; Brodbeck, U.
Uptake and intracellular stability of glycosylphosphatidylinositol-specific phospholipase D in neuroblastoma cells
Biochim. Biophys. Acta
1355
293-302
1997
Bos taurus
Manually annotated by BRENDA team
Kueng, M.; Buetikofer, P.; Brodbeck, U.; Stadelmann, B.
Expression of intracellular and GPI-anchored forms of GPI-specific phospholipase D in COS-1 cells
Biochim. Biophys. Acta
1357
329-338
1997
Bos taurus (P80109)
Manually annotated by BRENDA team
Lee, J.Y.; Kim, M.R.; Sok, D.E.
Enzymatic release of Zn2+-glycerophosphocholine cholinephosphodiesterase from brain membranes by glycosylphosphatidylinositol-specific phospholipases and its regulation
Neurochem. Res.
23
899-905
1998
Bos taurus
Manually annotated by BRENDA team
Lee, J.Y.; Lee, H.J.; Kim, M.R.; Myung, P.K.; Sok, D.E.
Regulation of brain glycosylphosphatidylinositol-specific phospholipase D by natural amphiphiles
Neurochem. Res.
24
1577-1583
1999
Bos taurus
Manually annotated by BRENDA team
Li, J.Y.; Hollfelder, K.; Huang, K.S.; Low, M.G.
Structural features of GPI-specific phospholipase D revealed by proteolytic fragmentation and Ca2+ binding studies
J. Biol. Chem.
269
28963-28971
1994
Bos taurus
Manually annotated by BRENDA team
Stadelmann, B.; Butikofer, P.; Konig, A.; Brodbeck, U.
The C-terminus of glycosylphosphatidylinositol-specific phospholipase D is essential for biological activity
Biochim. Biophys. Acta
1355
107-113
1997
Bos taurus (P80109)
Manually annotated by BRENDA team
Bonilla, J.B.; Cid, M.B.; Contreras, F.X.; Goni, F.M.; Martin-Lomas, M.
Phospholipase cleavage of D- and L-chiro-glycosylphosphoinositides asymmetrically incorporated into liposomal membranes
Chem. Eur. J.
12
1513-1528
2006
Bos taurus
Manually annotated by BRENDA team
Yoshida, M.; Sakuragi, N.; Kondo, K.; Tanesaka, E.
Cleavage with phospholipase of the lipid anchor in the cell adhesion molecule, csA, from Dictyostelium discoideum
Comp. Biochem. Physiol. B
143B
138-144
2006
Bos taurus (P80109)
-
Manually annotated by BRENDA team
Elortza, F.; Mohammed, S.; Bunkenborg, J.; Foster, L.J.; Nuehse, T.S.; Brodbeck, U.; Peck, S.C.; Jensen, O.N.
Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment
J. Proteome Res.
5
935-943
2006
Bos taurus
Manually annotated by BRENDA team