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Information on EC 3.1.21.4 - type II site-specific deoxyribonuclease and Organism(s) Methanocaldococcus jannaschii and UniProt Accession Q58895

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Methanocaldococcus jannaschii
UNIPROT: Q58895 not found.
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The taxonomic range for the selected organisms is: Methanocaldococcus jannaschii
The enzyme appears in selected viruses and cellular organisms
Reaction Schemes
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endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates
Synonyms
restriction enzyme, restriction endonuclease, ecori, hindiii, bamhi, pvuii, haeiii, hpaii, bglii, ecorv, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
type II restriction enzyme
-
DNA restriction endonuclease
-
-
-
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DNA restriction enzyme
-
-
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EC 3.1.23
-
-
-
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EC 3.1.24
-
-
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Endonuclease AbrI
-
-
-
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Endonuclease AccI
-
-
-
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Endonuclease AgeI
-
-
-
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Endonuclease ApaLI
-
-
-
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Endonuclease AvaI
-
-
-
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Endonuclease BamHI
-
-
-
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Endonuclease BanI
-
-
-
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Endonuclease BglI
-
-
-
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Endonuclease BglII
-
-
-
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Endonuclease BsoBI
-
-
-
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Endonuclease Bsp6I
-
-
-
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Endonuclease BstVI
-
-
-
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Endonuclease BsuBI
-
-
-
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Endonuclease BsuFI
-
-
-
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Endonuclease BsuRI
-
-
-
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Endonuclease CeqI
-
-
-
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Endonuclease Cfr10I
-
-
-
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Endonuclease Cfr9I
-
-
-
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Endonuclease CfrBI
-
-
-
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Endonuclease CviAII
-
-
-
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Endonuclease CviJI
-
-
-
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Endonuclease DdeI
-
-
-
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Endonuclease DpnI
-
-
-
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Endonuclease DpnII
-
-
-
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Endonuclease Eco47I
-
-
-
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Endonuclease Eco47II
-
-
-
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Endonuclease EcoRI
-
-
-
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Endonuclease EcoRII
-
-
-
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Endonuclease EcoRV
-
-
-
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Endonuclease FokI
-
-
-
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Endonuclease HaeII
-
-
-
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Endonuclease HaeIII
-
-
-
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Endonuclease HgAI
-
-
-
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Endonuclease HgiBI
-
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Endonuclease HgiCI
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Endonuclease HgiCII
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-
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Endonuclease HgiDI
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-
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Endonuclease HgiEI
-
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Endonuclease HgiGI
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-
-
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Endonuclease HhaII
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-
-
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Endonuclease HincII
-
-
-
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Endonuclease HindII
-
-
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Endonuclease HindIII
-
-
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Endonuclease HindVP
-
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Endonuclease HinfI
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-
-
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Endonuclease HpaI
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Endonuclease HpaII
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-
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Endonuclease HphI
-
-
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Endonuclease KpnI
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-
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Endonuclease LlaDCHI
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-
-
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Endonuclease MamI
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-
-
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Endonuclease MboI
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Endonuclease MboII
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-
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Endonuclease MjaI
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Endonuclease MjaII
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-
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Endonuclease MjaIII
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Endonuclease MjaIV
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Endonuclease MjaV
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-
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Endonuclease MjaVIP
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Endonuclease MspI
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-
-
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Endonuclease MthTI
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-
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Endonuclease MthZI
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-
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Endonuclease MunI
-
-
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Endonuclease MwoI
-
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Endonuclease NaeI
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Endonuclease NgoBI
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Endonuclease NgoBV
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-
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Endonuclease NgoFVII
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-
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Endonuclease NgoMIV
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-
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Endonuclease NgoPII
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-
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Endonuclease NlaIII
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-
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Endonuclease NlaIV
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-
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Endonuclease NmeDIP
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Endonuclease NspV
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Endonuclease PaeR7I
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-
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Endonuclease PstI
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-
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Endonuclease PvuI
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Endonuclease PvuII
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Endonuclease RsrI
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Endonuclease SacI
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-
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Endonuclease SalI
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-
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Endonuclease Sau3AI
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Endonuclease Sau96I
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Endonuclease ScaI
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Endonuclease ScrFI
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Endonuclease SfiI
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-
-
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Endonuclease SinI
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Endonuclease SmaI
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-
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Endonuclease SsoII
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Endonuclease StsI
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-
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Endonuclease TaqI
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Endonuclease TthHB8I
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-
-
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Endonuclease XamI
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-
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Endonuclease XcyI
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LlaII
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nuclease, deoxyribonucleic restriction endo-
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nuclease, restriction endodeoxyribo-
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R.AbrI
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R.AccI
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R.AgeI
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R.ApaLI
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R.AvaI
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R.BamHI
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R.BanI
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R.BglI
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-
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R.BglII
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R.BsoBI
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-
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R.Bsp6I
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-
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R.BstVI
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R.BsuBI
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R.BsuRI
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-
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R.CeqI
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R.Cfr10I
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R.Cfr9I
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R.CfrBI
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R.CviAII
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R.CviJI
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R.DdeI
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R.DpnI
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R.DpnII
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R.Eco47I
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R.Eco47II
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R.EcoRI
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R.EcoRII
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R.EcoRV
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R.FokI
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R.HaeII
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R.HaeIII
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R.HgAI
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R.HgiBI
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R.HgiCI
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R.HgiCII
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R.HgiDI
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R.HgiEI
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R.HgiGI
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R.HhaII
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R.HincII
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R.HindII
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R.HindIII
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R.HindVP
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R.HinfI
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R.HpaI
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R.HpaII
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R.HphI
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R.KpnI
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R.LlaDCHI
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R.MamI
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R.MboI
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R.MboII
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R.MjaI
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R.MjaII
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R.MjaIII
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R.MjaIV
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R.MjaV
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R.MjaVIP
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R.MspI
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R.MthTI
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R.MthZI
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R.MunI
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R.MwoI
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R.NaeI
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R.NgoBI
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R.NgoBV
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R.NgoFVII
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R.NgoI
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R.NgoMIV
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R.NgoPII
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R.NgoV
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R.NgoVII
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R.NlaIII
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R.NlaIV
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R.NmeDIP
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R.NspV
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R.PaeR7I
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R.PstI
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R.PvuI
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R.PvuII
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R.RsrI
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R.SacI
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R.SalI
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R.Sau3AI
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R.Sau96I
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R.ScaI
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R.ScrFI
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R.SfiI
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R.SinI
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R.SmaI
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R.SsoII
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-
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R.StsI
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R.TaqI
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-
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R.TthHB8I
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-
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R.XamI
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-
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R.XcyI
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restriction endodeoxyribonuclease
-
-
-
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restriction endonuclease
-
-
-
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restriction enzyme
-
-
-
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type II restriction enzyme
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of phosphoric ester
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-
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CAS REGISTRY NUMBER
COMMENTARY hide
9075-08-5
not distinguished from EC 3.1.21.5
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
DNA + H2O
double-stranded DNA fragments with terminal 5'-phosphates
show the reaction diagram
-
-
-
?
DNA + H2O
double-stranded DNA fragments with terminal 5'-phosphates
show the reaction diagram
-
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mg2+
required for activity
Mg2+
required for activity
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Orlowski, J.; Bujnicki, J.M.
Structural and evolutionary classification of type II restriction enzymes based on theoretical and experimental analyses
Nucleic Acids Res.
36
3552-3569
2008
Trichormus variabilis, Caryophanon latum, Helicobacter pylori, Helicobacter pylori (Q9ZLF0), Helicobacter pylori (Q9ZN14), Methylococcus capsulatus, Pyrococcus horikoshii, Staphylococcus hominis, Sulfolobus acidocaldarius, Thermus aquaticus, Corynebacterium striatum, Streptomyces achromogenes (O31074), Haemophilus parahaemolyticus (P00643), Serratia marcescens (P14229), Haemophilus influenzae (P20588), Staphylococcus aureus (P23736), Herpetosiphon aurantiacus (P25260), Nostoc sp. (P35677), Citrobacter freundii (Q04852), Sporosarcina sp. (Q194N8), Micrococcus sp. (Q2I0D9), Methanocaldococcus jannaschii (Q58723), Methanocaldococcus jannaschii (Q58895), Moraxella sp. (Q6S4U8), Sphaerotilus natans (Q6SA25), Cereibacter sphaeroides (Q6SA27), Geobacillus stearothermophilus (Q8L3A5), Lactococcus lactis (Q93K18), Thermus filiformis (Q9F8S3), Thalassobius gelatinovorus (Q9KHV6), Xanthomonas vasicola (Q9KVZ7), Neisseria meningitidis (Q9RLM3), Corynebacterium striatum M82B, Moraxella sp. A1 (Q6S4U8), Micrococcus sp. NEB 446 (Q2I0D9)
Manually annotated by BRENDA team