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Information on EC 2.7.7.9 - UTP-glucose-1-phosphate uridylyltransferase and Organism(s) Hordeum vulgare and UniProt Accession Q43772

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Hordeum vulgare
UNIPROT: Q43772 not found.
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The taxonomic range for the selected organisms is: Hordeum vulgare
The enzyme appears in selected viruses and cellular organisms
Synonyms
udp-glucose pyrophosphorylase, ugpase, udpg-pyrophosphorylase, udpgp, udp-glc pyrophosphorylase, udpglucose pyrophosphorylase, glucose-1-phosphate uridylyltransferase, udpg pyrophosphorylase, utp-glucose-1-phosphate uridylyltransferase, uridine diphosphoglucose pyrophosphorylase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
UDP-glucose pyrophosphorylase
-
glucose 1-phosphate uridylyltransferase
-
-
-
-
glucose-1-phosphate uridylyltransferase
-
-
-
-
UDP glucose pyrophosphorylase
-
-
-
-
UDP-Glc pyrophosphorylase
-
-
UDP-glucose pyrophosphorylase
UDPG phosphorylase
-
-
-
-
UDPG pyrophosphorylase
-
-
-
-
UDPglucose pyrophosphorylase
-
-
-
-
UGPase
-
-
uridine 5'-diphosphoglucose pyrophosphorylase
-
-
-
-
uridine diphosphate-D-glucose pyrophosphorylase
-
-
-
-
uridine diphosphoglucose pyrophosphorylase
-
-
-
-
uridine-diphosphate glucose pyrophosphorylase
-
-
-
-
uridylyltransferase, glucose 1-phosphate
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
nucleotidyl group transfer
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
UTP:alpha-D-glucose-1-phosphate uridylyltransferase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9026-22-6
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
UTP + D-glucose-1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
-
-
-
?
UTP + alpha-D-galactose 1-phosphate
diphosphate + UDP-galactose
show the reaction diagram
-
low activity
-
-
r
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
-
-
-
-
r
additional information
?
-
-
the enzyme catalyses a freely reversible reaction and is specific for alpha-D-glucose 1-phosphate
-
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
-
-
-
-
r
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
dithiothreitol
increases wild-type activity by about 25%
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.027 - 60
diphosphate
0.03 - 57
UDP-glucose
10
alpha-D-galactose 1-phosphate
-
pH 7.5, temperature not specified in the publication
0.033
alpha-D-glucose 1-phosphate
-
pH 7.5, temperature not specified in the publication
0.025
UTP
-
pH 7.5, temperature not specified in the publication
additional information
additional information
-
kinetics, overview
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0
Delta-NB mutant protein
0.02
Ncut-37 mutant protein
0.21
Ccut-101 mutant protein
0.27
Ccut-32 mutant protein
0.42
K260A mutant protein
1074
wild-type protein
12.8
Ncut-21 mutant protein
1547
Ccut-8 mutant protein
2.1
Delta 1-4 mutant protein
3.1
Ccut-67 mutant protein
5.4
Delta 1-8 mutant protein
591
Y192A mutant protein
752
K183A mutant protein
764
K405A mutant protein
853
K332A mutant protein
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.5 - 8.5
-
broad optimum in both reaction directions
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.5 - 10
-
forward reaction sharp drop in activity above pH 10.0, inactive above pH 10.0 and below pH 4.0, profile overview
5.5 - 9.5
-
reverse reaction, inactive above pH 10.0 and below pH 5.0, profile overview
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.54
Ncut-21 mutant protein
5.58
Ccut-101 mutant protein
5.63
Delta 1-4 mutant protein
5.69
Ccut-67 mutant protein
5.7
Ncut-37 mutant protein
5.79
Ccut-32 mutant protein
5.8
Ccut-8 mutant protein
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
developing seeds
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
-
the plant UGPases belongs to the so called UGPase-A family
physiological function
-
UDP-Glc pyrophosphorylase is an essential enzyme responsible for production of UDP-Glc, which is used in hundreds of glycosylation reactions involving addition of Glc to a variety of compounds
additional information
-
structure modeling, overview. The quaternary structure of the enzyme is affected by addition of either single or both substrates in either direction of the reaction, resulting in a shift from UGPase dimers toward monomers, the active form of the enzyme. The substrate-induced changes in quaternary structure of the enzyme may have a regulatory role to assure maximal activity
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
UGPA_HORVU
473
0
51644
Swiss-Prot
other Location (Reliability: 3)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
51600
x * 51600, about, embryo, amino acid sequence determination
additional information
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
x * 51600, about, embryo, amino acid sequence determination
oligomer
dimer
-
inactive enzyme form
monomer
-
active enzyme form
additional information
-
structure modeling, overview. The quaternary structure of the enzyme is affected by addition of either single or both substrates in either direction of the reaction, resulting in a shift from UGPase dimers toward monomers, the active form of the enzyme. The substrate-induced changes in quaternary structure of the enzyme may have a regulatory role to assure maximal activity. The ratio of monomers to dimers is about 5:1 in absence of substrate
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glycoprotein
3 putative N-glycosylation sites, possible role in intracellular targeting of the enzyme
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
C99S
site-directed mutagenesis, half Vmax of wild-type, 12fold higher Km for diphosphate, altered diphosphate binding
Ccut-101
101 amino acid residues deleted (exons 16-19, and 1 amino acid residue of exon 15)
Ccut-32
32 amino acid residues deleted (exon 18 and exon 19)
Ccut-67
67 amino acid residues deleted (exons 17-19)
Ccut-8
8 amino acid residues deleted (last exon (exon 19))
Delta 1-4
deletion of 4 amino acid residues of the C-terminal domain, possibly involved in oligomerization
Delta 1-8
deletion of 8 amino acid residues of the C-terminal domain, possibly involved in oligomerization
Delta-NB
deletion mutant: amino acid residue 96-100 deleted (essential for catalysis)
K183A
possibly involved in subunit interaction
K260A
possibly involved in diphosphate binding
K332A
possibly involved in subunit interaction
K405A
possibly involved in subunit interaction
Ncut-21
21 amino acid residues deleted (exon 1)
Ncut-37
37 amino acid residues deleted (exon 1 and exon 2)
Y192A
possibly involved in UDP-glucose binding
additional information
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
immobilized metal ion affinity chromatography
native and recombinant wild-type, the latter from Escherichia coli to homogeneity
recombinant enzyme from Escherichia coli
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Escherichia coli
from cDNA libraries, 11 clones, DNA and amino acid sequence determination and analysis
gene Ugp, expression in Escherichia coli
His-tag version expressed in Escherichia coli BL21 (DE3)
overexpression in Escherichia coli
expression in Escherichia coli
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Eimert, K.; Villand, P.; Kilian, A.; Kleczkowski, L.A.
Cloning and characterization of several cDNAs for UDP-glucose pyrophosphorylase from barley (Hordeum vulgare) tissues
Gene
170
227-232
1996
Hordeum vulgare (Q43772), Hordeum vulgare
Manually annotated by BRENDA team
Martz, F.; Wilczynska, M.; Kleczkowski, L.A.
Oligomerization status, with the monomer as active species, defines catalytic efficiency of UDP-glucose pyrophosphorylase
Biochem. J.
367
295-300
2002
Hordeum vulgare (Q43772), Hordeum vulgare
Manually annotated by BRENDA team
Kleczkowski, L.A.; Martz, F.; Wilczynska, M.
Factors affecting oligomerization status of UDP-glucose pyrophosphorylase
Phytochemistry
66
2815-2821
2005
Hordeum vulgare (Q43772), Hordeum vulgare
Manually annotated by BRENDA team
Meng, M.; Fitzek, E.; Gajowniczek, A.; Wilczynska, M.; Kleczkowski, L.A.
Domain-specific determinants of catalysis/substrate binding and the oligomerization status of barley UDP-glucose pyrophosphorylase
Biochim. Biophys. Acta
1794
1734-1742
2009
Hordeum vulgare (Q43772), Hordeum vulgare
Manually annotated by BRENDA team
Decker, D.; Meng, M.; Gornicka, A.; Hofer, A.; Wilczynska, M.; Kleczkowski, L.A.
Substrate kinetics and substrate effects on the quaternary structure of barley UDP-glucose pyrophosphorylase
Phytochemistry
79
39-45
2012
Hordeum vulgare
Manually annotated by BRENDA team
Decker, D.; Oeberg, C.; Kleczkowski, L.A.
Identification and characterization of inhibitors of UDP-glucose and UDP-sugar pyrophosphorylases for in vivo studies
Plant J.
90
1093-1107
2017
Arabidopsis thaliana (P57751), Arabidopsis thaliana (Q9M9P3), Hordeum vulgare (Q43772)
Manually annotated by BRENDA team