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Information on EC 2.7.7.9 - UTP-glucose-1-phosphate uridylyltransferase and Organism(s) Homo sapiens and UniProt Accession Q16851

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Homo sapiens
UNIPROT: Q16851 not found.
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The taxonomic range for the selected organisms is: Homo sapiens
The enzyme appears in selected viruses and cellular organisms
Synonyms
udp-glucose pyrophosphorylase, ugpase, udpg-pyrophosphorylase, udpgp, udp-glc pyrophosphorylase, udpglucose pyrophosphorylase, glucose-1-phosphate uridylyltransferase, udpg pyrophosphorylase, utp-glucose-1-phosphate uridylyltransferase, uridine diphosphoglucose pyrophosphorylase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
UDP-glucose pyrophosphorylase
-
UPD1
splicing variant
glucose 1-phosphate uridylyltransferase
-
-
-
-
glucose-1-phosphate uridylyltransferase
-
-
-
-
UDP glucose pyrophosphorylase
-
-
-
-
UDP-glucose pyrophosphorylase
UDPG phosphorylase
-
-
-
-
UDPG pyrophosphorylase
-
-
-
-
UDPglucose pyrophosphorylase
-
-
-
-
uridine 5'-diphosphoglucose pyrophosphorylase
-
-
-
-
uridine diphosphate-D-glucose pyrophosphorylase
-
-
-
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uridine diphosphate-glucose pyrophosphorylase
-
-
uridine diphosphoglucose pyrophosphorylase
-
-
-
-
uridine-diphosphate glucose pyrophosphorylase
-
-
-
-
uridylyltransferase, glucose 1-phosphate
-
-
-
-
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
nucleotidyl group transfer
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
UTP:alpha-D-glucose-1-phosphate uridylyltransferase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9026-22-6
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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
-
-
-
r
diphosphate + CDP-glucose
CTP + alpha-D-glucose 1-phosphate
show the reaction diagram
diphosphate + GDP-glucose
GTP + alpha-D-glucose 1-phosphate
show the reaction diagram
-
calf and human liver, poor substrate
-
-
r
diphosphate + TDP-glucose
TTP + alpha-D-glucose 1-phosphate
show the reaction diagram
diphosphate + UDP-mannose
UTP + D-mannose 1-phosphate
show the reaction diagram
-
calf and human liver, poor substrate
-
-
r
diphosphate + UDP-xylose
UTP + D-xylose 1-phosphate
show the reaction diagram
UTP + alpha-D-galactose 1-phosphate
diphosphate + UDP-galactose
show the reaction diagram
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
-
-
-
r
UTP + alpha-D-glucose 1-phosphate
diphosphate + UDP-glucose
show the reaction diagram
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mg2+
required
Ni2+
-
about 25% as effective as Mg2+
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
UDP
UGPase activity is not significantly decreases in A-549 cells treated with 0.0001-0.003 mM UDP. Activity is significantly decreased at 0.005 mM and 0.1 mM UDP treatments. The inhibition of UGPase activity in A549 cells is 28fold higher at 0.1 mM UDP treatment in comparison to 0.005 mM treatment
iodoacetamide
-
wild-type: loss of 56% activity after 30 min at 0.1 mM, mutant C123S is not affected
MgUTP
-
wild-type and mutants C123S, H266R, W218, R389H, R422Q, R445H
MgUTP2-
-
-
UDP-galactose
additional information
-
-
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
-
requirement
DTT
-
requirement
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.067 - 0.253
alpha-D-glucose 1-phosphate
0.095 - 1
alpha-D-glucose 1-phosphate
0.18 - 0.21
diphosphate
0.05 - 0.18
UDP-glucose
0.048 - 0.56
UTP
additional information
additional information
-
kinetic parameters of various organisms, pH 8.0, overview
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
additional information
-
-
-
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.095
MgUTP2-
-
mutant H266R, pH 8.0, 25°C
additional information
additional information
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
-
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7.5
assay at
7.3 - 8.6
-
broad
7.6 - 9.2
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broad
8 - 9
-
bovine mammary gland, human erythrocytes
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
assay at
37
-
assay at
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
from normal and galactosemic individuals
Manually annotated by BRENDA team
additional information
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
-
a feature that discriminates UGPs of different species is the quaternary organization. While UGPs in protists are monomers, di- and tetrameric forms exist in bacteria, and the enzyme from yeast and human are octameric UGPs
additional information
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
UGPA_HUMAN
508
0
56940
Swiss-Prot
other Location (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
55000
8 * 55000, SDS-PAGE, human UGPase forms octamers through end-to-end and side-by-side interactions, structure, overview
79000
1 * 79000, mutant enzyme N491P/L492E, SDS-PAGE, depolymerization of hUGPase, like in mutant N491P/L492E, results in monomers and higher enzymatic activity
423700
-
gel filtration, recombinant enzyme
450000
56000
-
8 * 56000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
homooctamer
8 * 55000, SDS-PAGE, human UGPase forms octamers through end-to-end and side-by-side interactions, structure, overview
monomer
1 * 79000, mutant enzyme N491P/L492E, SDS-PAGE, depolymerization of hUGPase, like in mutant N491P/L492E, results in monomers and higher enzymatic activity
octamer
additional information
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
in the D4 octameric structure of the hUGP1-UDP-Glc complex, all subunits have the same overall conformation. The transition of the UGP octamer between the apo- and the product-bound forms is in agreement with the Monod-Wyman-Changeux symmetry model. oligomerzation facilitates an intermolecular stabilization of the sugar moiety in the active site (interlock mechanism), enhances protein stability, enables mild positive cooperativity observed for the octameric wild-type UGP1 towards diphosphate in the reverse reaction, and may allow regulation of the UGP octamer by modification of a single subunit
purified recombinant enzyme, hanging drop vapour diffusion method, mixing of 0.002 ml of 10 mg/ml protein in 20 mM Tris/HCl, pH 8.0, and 200 mM NaCl, with 0.001 ml of reservoir solution containing 100 mM HEPES, pH 6.5, 5 mM MgSO4, 15% w/v PEG 3350 and 20% v/v glycerol, 20°C, X-ray diffraction structure determination and analysis at 3.6 A resolution, molecular replacement
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D253L
0.063% of wild-type activity
E412D
site-directed mutagenesis, the mutation does not change the oligomeric state, the mutant shows 176% catalytic activity compared to the wild-type enzyme
E412K
site-directed mutagenesis, the mutant has a longer side chain with a reverse in charge showed obvious inhibitory effects which results in 78% reduced activity compared to the wild-type hUGPase activity
E412Q
site-directed mutagenesis, the mutation changes the charge property, but not the length of side chain and shows only a marginal increase in activity of 19% when compared with the wild-type protein
G115D
0.004% of wild-type activity
G116A
0.067% of wild-type activity
G222A
insoluble protein
H223L
insoluble protein
K127A
0.150% of wild-type activity
K396A
0.041% of wild-type activity
K4110S
site-directed mutagenesis, the mutant shows increased activity compared to the wild-type enzyme
L113G
insoluble protein
N251L
0.011% of wild-type activity
N328L
insoluble protein
N491P/L492E
site-directed mutagenesis, mutant N491P/L492E is constructed to depolymerize hUGPase octamers, the mutation in the C-terminal left-handed beta-helix changes the oligomerization state the mutant enzyme, that becomes monomeric, it shows about the double activity of the wild-type enzyme
P414G/T415P
site-directed mutagenesis, the mutant shows activity similar to that of the wild-type hUGPase, the mutation does not change the oligomeric state
S309N/S311R
site-directed mutagenesis, mutation in sequence analogy to the Saccharomyces cerevisiae enzyme, the mutant shows 84% of wild-type activity
T406K/M407L
site-directed mutagenesis, the mutant shows activity similar to that of the wild-type hUGPase, the mutation does not change the oligomeric state
V416N
site-directed mutagenesis, the mutant shows activity similar to that of the wild-type hUGPase, the mutation does not change the oligomeric state
C123S
-
site-directed mutagenesis, active enzyme, 7fold increase in Km for magnesium diphosphate, 2fold increased Ki for MgUTP2-, no longer sensitive to SH-reagents, e.g. iodoacetamide
H266R
-
site-directed mutagenesis, mutant enzyme is active and similar to the wild-type, 4fold decrease in Km and Ki for MgUTP
H446S
-
site-directed mutagenesis, the mutant shows only slight dissociation and slightly reduced activity in forward and reverse reactionsactivity
H497A
I466T
-
site-directed mutagenesis, the mutant shows dissociation of subunits, a tetramer appears in addition to di- and monomers, and highly reduced activity in forward and reverse reactions
I468K
-
site-directed mutagenesis, the mutant shows dissociation of subunits, a tetramer appears in addition to di- and monomers, the mutant shows reduced activity in the reverse reaction
I487D
-
site-directed mutagenesis, the mutant shows dissociation of subunits, and highly reduced activity in forward and reverse reactions
L492E
-
site-directed mutagenesis, the mutant shows only slight dissociation and retains activity
N391P/L492E
-
site-directed mutagenesis, inactive mutant showing dissociation into di- and monomers
N491P
-
site-directed mutagenesis, the mutant shows reduced activity in the reverse reaction
R389H
-
site-directed mutagenesis, mutant enzyme is active and similar to the wild-type
R391K
-
site-directed mutagenesis, no activity, no correct folding
R422Q
-
site-directed mutagenesis, mutant enzyme is active and similar to the wild-type
R445H
-
site-directed mutagenesis, mutant enzyme is active and similar to the wild-type
T448K
-
site-directed mutagenesis, the mutant shows dissociation of subunits, a tetramer appears in addition to di- and monomers, and highly reduced activity in forward and reverse reactions
W218S
-
site-directed mutagenesis, mutant enzyme is active and similar to the wild-type, increase in Km
W333S
-
site-directed mutagenesis, no activity, no correct folding
additional information
-
truncation mutant DELTA 490-497 is almost inactive due to dissociation into di- and monomers
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
enzyme requires 2-mercaptoethanol for stability
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
recombinnat His-tagged wild-type and mutant enzymes from Escherichia coli strain BL21(DE3) by nickel affinity chromatography and gel filtration
from liver
-
recombinant N-terminally StrepII-tagged enzyme from Escherichia coli BL21(DE3) by affinity chromatography
-
recombinant wild-type enzyme, partially from Escherichia coli JM109
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression of His-tagged wild-type and mutant enzymes in Escherichia coli strain BL21(DE3)
expression of the N-terminally StrepII-tagged enzyme in Escherichia coli BL21(DE3)
-
expression of wild-type and mutants in Escherichia coli JM109
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Chacko, C.M.; McCrone, L.; Nadler, H.L.
Uridine diphosphoglucose pyrophosphorylase and uridine diphosphogalactose pyrophosphorylase in human skin fibroblasts derived from normal and galactosemic individuals
Biochim. Biophys. Acta
268
113-120
1972
Homo sapiens
Manually annotated by BRENDA team
Turnquist, R.L.; Turnquist, M.M.; Bachmann, R.C.; Hansen, R.G.
Uridine diphosphate glucose pyrophosphorylase: differential heat inactivation and further characterization of human liver enzyme
Biochim. Biophys. Acta
364
59-67
1974
Homo sapiens
Manually annotated by BRENDA team
Turnquist, R.L.; Gillett, T.A.; Hansen, R.G.
Uridine diphosphate glucose pyrophosphorylase. Crystallization and properties of the enzyme from rabbit liver and species comparisons
J. Biol. Chem.
249
7695-7700
1974
Bos taurus, Oryctolagus cuniculus, Homo sapiens
Manually annotated by BRENDA team
Turnquist, R.L.; Hansen, R.G.
Uridine diphosphoryl glucose pyrophosphorylase
The Enzymes, 3rd. Ed. (Boyer, P. D. , ed. )
8
51-71
1973
Acetabularia sp., Beta vulgaris subsp. vulgaris, Bombyx mori, Bos taurus, Saccharomyces cerevisiae, Canis lupus familiaris, Capra hircus, Gallus gallus, Columba sp., Oryctolagus cuniculus, Dictyostelium discoideum, Escherichia coli, Ovis aries, Homo sapiens, Pisum sativum, Rattus norvegicus, Salmonella enterica subsp. enterica serovar Typhimurium, Zea mays
-
Manually annotated by BRENDA team
Chang, H.Y.; Peng, H.L.; Chao, Y.C.; Duggleby, R.G.
The importance of conserved residues in human liver UDPglucose pyrophosphorylase
Eur. J. Biochem.
236
723-728
1996
Homo sapiens
Manually annotated by BRENDA team
Yu, Q.; Zheng, X.
The crystal structure of human UDP-glucose pyrophosphorylase reveals a latch effect that influences enzymatic activity
Biochem. J.
442
283-291
2012
Drosophila melanogaster (A5XCL5), Danio rerio (B8JMZ1), Saccharomyces cerevisiae (C7GP37), Homo sapiens (Q16851), Homo sapiens, Caenorhabditis elegans (Q9XUS5)
Manually annotated by BRENDA team
Fuehring, J.; Damerow, S.; Fedorov, R.; Schneider, J.; Muenster-Kuehnel, A.K.; Gerardy-Schahn, R.
Octamerization is essential for enzymatic function of human UDP-glucose pyrophosphorylase
Glycobiology
23
426-437
2013
Homo sapiens
Manually annotated by BRENDA team
Fuehring, J.I.; Cramer, J.T.; Schneider, J.; Baruch, P.; Gerardy-Schahn, R.; Fedorov, R.
A quaternary mechanism enables the complex biological functions of octameric human UDP-glucose pyrophosphorylase, a key enzyme in cell metabolism
Sci. Rep.
5
9618
2015
Homo sapiens (Q16851), Homo sapiens
Manually annotated by BRENDA team
Sharma, M.; Sharma, S.; Ray, P.; Chakraborti, A.
Targeting Streptococcus pneumoniae UDP-glucose pyrophosphorylase (UGPase) in vitro validation of a putative inhibitor
Drug Target Insights
14
26-33
2020
Streptococcus pneumoniae (A0A0H2ZMV4), Streptococcus pneumoniae, Homo sapiens (Q16851), Homo sapiens
Manually annotated by BRENDA team