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Information on EC 2.7.1.25 - adenylyl-sulfate kinase and Organism(s) Penicillium chrysogenum and UniProt Accession Q12657

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IUBMB Comments
The human phosphoadenosine-phosphosulfate synthase (PAPSS) system is a bifunctional enzyme (fusion product of two catalytic activities). In a first step, sulfate adenylyltransferase catalyses the formation of adenosine 5'-phosphosulfate (APS) from ATP and inorganic sulfate. The second step is catalysed by the adenylylsulfate kinase portion of 3'-phosphoadenosine 5'-phosphosulfate (PAPS) synthase, which involves the formation of PAPS from enzyme-bound APS and ATP. In contrast, in bacteria, yeast, fungi and plants, the formation of PAPS is carried out by two individual polypeptides, sulfate adenylyltransferase (EC 2.7.7.4) and adenylyl-sulfate kinase (EC 2.7.1.25).
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Penicillium chrysogenum
UNIPROT: Q12657
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Word Map
The taxonomic range for the selected organisms is: Penicillium chrysogenum
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria, Archaea
Synonyms
aps kinase, papss1, aps-kinase, paps synthetase, papss, paps synthase, adenosine-5'-phosphosulfate kinase, mxan3487, adenosine 5'-phosphosulfate kinase, adenylylsulfate kinase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3'-phosphoadenosine-5'-phosphosulfate synthetase
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5'-phosphoadenosine sulfate kinase
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adenosine 5'-phosphosulfate kinase
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adenosine phosphosulfate kinase
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adenosine phosphosulfokinase
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adenosine-5'-phosphosulfate 3'-phosphotransferase
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adenosine-5'-phosphosulfate-3'-phosphokinase
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adenosine-5'phosphosulfate kinase
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adenylylsulfate 3'-phosphotransferase
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adenylylsulfate kinase
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APS kinase
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ATP adenosine-5'-phosphosulfate 3'-phosphotransferase
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kinase, adenylylsulfate (phosphorylating)
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REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
ATP + adenylyl sulfate = ADP + 3'-phosphoadenylyl sulfate
show the reaction diagram
enzyme follows a compulsory ordered mechanism in which MgATP2- binds before APS, and PAPS leaves before MgADP-
ATP + adenylyl sulfate = ADP + 3'-phosphoadenylyl sulfate
show the reaction diagram
mechanism
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REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
phospho group transfer
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-
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SYSTEMATIC NAME
IUBMB Comments
ATP:adenylyl-sulfate 3'-phosphotransferase
The human phosphoadenosine-phosphosulfate synthase (PAPSS) system is a bifunctional enzyme (fusion product of two catalytic activities). In a first step, sulfate adenylyltransferase catalyses the formation of adenosine 5'-phosphosulfate (APS) from ATP and inorganic sulfate. The second step is catalysed by the adenylylsulfate kinase portion of 3'-phosphoadenosine 5'-phosphosulfate (PAPS) synthase, which involves the formation of PAPS from enzyme-bound APS and ATP. In contrast, in bacteria, yeast, fungi and plants, the formation of PAPS is carried out by two individual polypeptides, sulfate adenylyltransferase (EC 2.7.7.4) and adenylyl-sulfate kinase (EC 2.7.1.25).
CAS REGISTRY NUMBER
COMMENTARY hide
9012-38-8
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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
ATP + adenosine 5-phosphosulfate
ADP + 3'-phosphoadenosine 5'-phosphosulfate
show the reaction diagram
ATP + adenylyl sulfate
ADP + 3'-phosphoadenylyl sulfate
show the reaction diagram
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-
-
r
ATP + adenosine 5-phosphosulfate
ADP + 3'-phosphoadenosine 5'-phosphosulfate
show the reaction diagram
ATP + adenylyl sulfate
ADP + 3'-phosphoadenylyl sulfate
show the reaction diagram
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-
-
-
r
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
ATP + adenosine 5-phosphosulfate
ADP + 3'-phosphoadenosine 5'-phosphosulfate
show the reaction diagram
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second step in pathway of assimilation of inorganic sulfate
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?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Co2+
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5 mM, 58% of activation with Mg2+ or Mn2+
Mn2+
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5 mM yield the same reaction velocity as 5 mM Mg2+, excess inhibits slightly
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
adenosine 5'-phosphosulfate
adenosine 5'-phosphosulfate can bind to E-MgADP forming a catalytically inactive E-MgADP-APS ternary complex
ammonium sulfate
high salt inhibits at low adenosine 5'-phosphosulfate concentrations, but activates at high adenosine 5'-phosphosulfate concentrations
2'-Phosphoadenosine 5'-phosphosulfate
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2,4,6-Trinitrobenzene sulfonate
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in the presence or absence of ATP-sulfurylase
3'-phosphoadenosine 5'-phosphosulfate
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product inhibition
adenosine 5'-phosphosulfate
ATP
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inhibition by free ATP, i.e. in excess of total Mg2+
diethyldicarbonate
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in the presence or absence of ATP-sulfurylase
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
ammonium sulfate
high salt activates at high adenosine 5'-phosphosulfate concentrations but inhibits at low adenosine 5'-phosphosulfate concentrations
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.003 - 0.039
3'-phosphoadenosine 5'-phosphosulfate
0.001 - 0.012
adenosine 5'-phosphosulfate
0.8 - 2.4
ATP
0.008
3'-phosphoadenosine 5'-phosphosulfate
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pH 8.0, 30°C
0.0008 - 0.0014
adenosine 5'-phosphosulfate
0.8 - 1.5
ATP
additional information
additional information
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kinetic study
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Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.013
adenosine 5'-phosphosulfate
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pH 8.1, 30°C
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
8
-
90% of maximal activity at pH 7.5 and pH 8.5
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
KAPS_PENCH
211
0
23770
Swiss-Prot
Mitochondrion (Reliability: 5)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
30000
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2 * 30000, SDS-PAGE
33000
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2 * 33000, gel filtration at 46°C, the enzyme dissociates into two inactive monomers by heating above 42°C
57000
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gel filtration at 22°C
59000 - 60000
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gel filtration
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
crystals are grown in 1.7 M NaH2PO4, 300 mM K2HPO4 and 100 mM Na-succinate, pH 4.0 by hanging drop vapor diffusion at room temperature, crystal structure of E-ADP-APS ternary complex at 1.43 A, crystal structure of E-ADP binary complex at 2.0 A
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
S104A
similar properties as wild-type
S107A
similar properties as wild-type enzyme
S107C
similar properties as wild-type, suggesting that S107 is not essential for activity but may be located in the substrate binding pocket
S97A
similar properties as wild-type
S99A
similar properties as wild-type
T103A
similar properties as wild-type
Y109F
similar properties as wild-type, velocity curve is shifted to the far right
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6
-
below, reversible inactivation at 30°C, reactivation rate increases with increasing pH
641209
7
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reversible inactivation at 42°C
641209
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
35
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inactivation above, reversible by cooling to 0-30°C
36
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equilibrium between active and inactive enzyme form
40
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reversible inactivation above by subunit dissociation, kinetics, MgATP2- or MgADP- stimulate reactivation
43
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reversible inactivation, t1/2: 1 min
60 - 100
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1 min, 85% reversible inactivation
80
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irreversible inactivation, t1/2: 47 min, pH 8, 0.023 mg protein/ml
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
slow inactivation in dilute solutions, even at low temperatures
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PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
ammonium sulfate, Affi-gel blue, Matrix-gel green, Agarose A
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CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression of wild-type and S107A mutant enzyme in Escherichia coli
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Renosto, F.; Seubert, P.A.; Segel, I.H.
Adenosine 5-phosphosulfate kinase from Penicillium chrysogenum. Purification and kinetic characterization
J. Biol. Chem.
259
2113-2123
1984
Penicillium chrysogenum
Manually annotated by BRENDA team
Renosto, F.; Schultz, T.; Re, E.; Mazer, J.; Chandler, C.J.; Barron, A.; Segel, I.H.
Comparative stability and catalytic and chemical properties of the sulfate-activating enzymes from Penicillium chrysogenum (mesophile) and Penicillium duponti (thermophile)
J. Bacteriol.
164
674-683
1985
Penicillium chrysogenum, Penicillium duponti
Manually annotated by BRENDA team
Renosto, F.; Seubert, P.A.; Knudson, P.; Segel, I.H.
APS kinase from Penicillium chrysogenum. Dissociation and reassociation of subunits as the basis of the reversible heat inactivation
J. Biol. Chem.
260
1535-1544
1985
Penicillium chrysogenum
Manually annotated by BRENDA team
Renosto, F.; Martin, R.L.; Segel, I.H.
Sulfate-activating enzymes of Penicillium chrysogenum. The ATP sulfurylase.adenosine 5-phosphosulfate complex does not serve as a substrate for adenosine 5-phosphosulfate kinase
J. Biol. Chem.
264
9433-9437
1989
Penicillium chrysogenum
Manually annotated by BRENDA team
MacRae, I.J.; Rose, A.B.; Segel, I.H.
Adenosine 5'-phosphosulfate kinase from Penicillium chrysogenum. site-directed mutagenesis at putative phosphoryl-accepting and ATP P-loop residues
J. Biol. Chem.
273
28583-28589
1998
Escherichia coli (P23846), Escherichia coli, Penicillium chrysogenum (Q12657), Penicillium chrysogenum
Manually annotated by BRENDA team
MacRae, I.J.; Segel, I.H.
Adenosine 5'-phosphosulfate (APS) kinase: diagnosing the mechanism of substrate inhibition
Arch. Biochem. Biophys.
361
277-282
1999
Penicillium chrysogenum
Manually annotated by BRENDA team
Lansdon, E.B.; Segel, I.H.; Fisher, A.J.
Ligand-induced structural changes in adenosine 5'-phosphosulfate kinase from Penicillium chrysogenum
Biochemistry
41
13672-13680
2002
Penicillium chrysogenum (Q12657), Penicillium chrysogenum
Manually annotated by BRENDA team