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Information on EC 2.6.1.2 - alanine transaminase and Organism(s) Hordeum vulgare and UniProt Accession P52894

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EC Tree
     2 Transferases
         2.6 Transferring nitrogenous groups
             2.6.1 Transaminases
                2.6.1.2 alanine transaminase
IUBMB Comments
A pyridoxal-phosphate protein. 2-Aminobutanoate can act slowly instead of alanine.
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This record set is specific for:
Hordeum vulgare
UNIPROT: P52894
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The taxonomic range for the selected organisms is: Hordeum vulgare
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria, Archaea
Synonyms
alanine aminotransferase, alanine transaminase, alat, pyruvate transaminase, glutamic-pyruvic transaminase, glutamate-pyruvate transaminase, alanine-aminotransferase, alaat, l-alanine aminotransferase, c-aat, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
alanine aminotransferase
-
alanine aminotransferase
-
-
-
-
alanine-alpha-ketoglutarate aminotransferase
-
-
-
-
alanine-pyruvate aminotransferase
-
-
-
-
ALT
-
-
-
-
aminotransferase, alanine
-
-
-
-
beta-alanine aminotransferase
-
-
-
-
glutamic acid-pyruvic acid transaminase
-
-
-
-
glutamic-alanine transaminase
-
-
-
-
glutamic-pyruvic aminotransferase
-
-
-
-
glutamic-pyruvic transaminase
-
-
-
-
GPT
-
-
-
-
L-alanine aminotransferase
-
-
-
-
L-alanine transaminase
-
-
-
-
L-alanine-alpha-ketoglutarate aminotransferase
-
-
-
-
pyruvate transaminase
-
-
-
-
pyruvate-alanine aminotransferase
-
-
-
-
pyruvate-glutamate transaminase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
amino group transfer
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
L-alanine:2-oxoglutarate aminotransferase
A pyridoxal-phosphate protein. 2-Aminobutanoate can act slowly instead of alanine.
CAS REGISTRY NUMBER
COMMENTARY hide
9000-86-6
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
L-alanine + 2-oxoglutarate
pyruvate + L-glutamate
show the reaction diagram
pyruvate + L-glutamate
L-alanine + 2-oxoglutarate
show the reaction diagram
L-alanine + 2-oxoglutarate
pyruvate + L-glutamate
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
L-alanine + 2-oxoglutarate
pyruvate + L-glutamate
show the reaction diagram
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
pyridoxal 5'-phosphate
-
pyridoxal 5'-phosphate
-
-
additional information
-
anaerobically induced isoform does not require the presence of pyridoxal 5'-phosphate to retain its activity
-
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
(aminooxy)acetate
-
cycloserine
-
Aminooxyacetate
-
1 mM, 98% inhibition
Glutarate
-
10 mM, 94% inhibition
Semicarbazide
-
10 mM, 97% inhibition
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
an 1.5fold increase in enzyme activity is detected under hypoxic conditions
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.2 - 0.3
2-oxoglutarate
3.8 - 5.6
L-alanine
0.8 - 4.9
L-glutamate
0.1 - 0.2
pyruvate
5
2-oxoglutarate
-
pH 8.0, 23°C
17
alanine
-
pH 8.0, 23°C
1
glutamate
-
pH 8.0, 23°C
0.06
pyruvate
-
pH 8.0, 23°C
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
12.11
2-oxoglutarate
cofactor: L-alanine, 25°C, pH 8.0
12.11
L-alanine
cofactor: 2-oxoglutarate, 25°C, pH 8.0
25.62
L-glutamate
cofactor: pyruvate, 25°C, pH 8.0
25.62
pyruvate
cofactor: L-glutamate, 25°C, pH 8.0
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0069
(aminooxy)acetate
Hordeum vulgare
25°C, pH 8.0
0.119
cycloserine
Hordeum vulgare
25°C, pH 8.0
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
8 - 8.3
-
with alanine and 2-oxoglutarate
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
transgenic tobacco lines expressing synthetic alanine aminotransferase show improvement in nitrogen uptake, total free amino acid, crude proteins, enzyme activity, leaf area, stalk diameter, above the ground fresh mass, above ground dry matter and seed weight per plant which demonstrates improved nitrogen uptake and its incorporation into biomass as compared to the wild type
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
ALA2_HORVU
482
0
52877
Swiss-Prot
other Location (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
50000
-
2 * 50000, SDS-PAGE
97000
-
gel filtration
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
-
2 * 50000, SDS-PAGE
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
HvAlaAT is crystallized in complex with pyridoxal 5'-phosphate and L-cycloserine. Structure of this complex is solved at 2.7 A resolution
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, 10% glycerol, half-life of 2 weeks
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
anaerobically induced isoform, ammonium sulfate, gel filtration, Q-Sepharose, Mono P, Mono Q
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli as a His-tagged fusion protein
expressed in Nicotiana tabacum
expressed in Triticum aestivum and Sorghum bicolor
expression in Escherichia coli
expressed in Arabidopsis thaliana
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
agriculture
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Good, A.G.; Muench, D.G.
Purification and characterization of an anaerobically induced alanine aminotransferase from barley roots
Plant Physiol.
99
1520-1525
1992
Hordeum vulgare
Manually annotated by BRENDA team
Miyashita, Y.; Dolferus, R.; Ismond, K.P.; Good, A.G.
Alanine aminotransferase catalyses the breakdown of alanine after hypoxia in Arabidopsis thaliana
Plant J.
49
1108-1121
2007
Hordeum vulgare
Manually annotated by BRENDA team
Duff, S.M.; Rydel, T.J.; McClerren, A.L.; Zhang, W.; Li, J.Y.; Sturman, E.J.; Halls, C.; Chen, S.; Zeng, J.; Peng, J.; Kretzler, C.N.; Evdokimov, A.
The enzymology of alanine aminotransferase (AlaAT) isoforms from Hordeum vulgare and other organisms, and the HvAlaAT crystal structure
Arch. Biochem. Biophys.
528
90-101
2012
Halalkalibacterium halodurans, Saccharomyces cerevisiae, Oryza sativa, Pseudomonas putida, Rhodopseudomonas palustris, Zea mays, Hordeum vulgare (P52894), Hordeum vulgare
Manually annotated by BRENDA team
McAllister, C.H.; Good, A.G.
Alanine aminotransferase variants conferring diverse NUE phenotypes in Arabidopsis thaliana
PLoS ONE
10
e0121830
2015
Hordeum vulgare (P52894), Hordeum vulgare, Mus musculus (Q8QZR5), Pyrococcus furiosus (Q9P9M8)
Manually annotated by BRENDA team
McAllister, C.H.; Facette, M.; Holt, A.; Good, A.G.
Analysis of the enzymatic properties of a broad family of alanine aminotransferases
PLoS ONE
8
e55032
2013
Medicago truncatula, Arabidopsis thaliana (F4I7I0), Arabidopsis thaliana (Q9LDV4), Saccharomyces cerevisiae (P52893), Hordeum vulgare (P52894), Mus musculus (Q8QZR5), Pyrococcus furiosus (Q9P9M8)
Manually annotated by BRENDA team
Ahmed, M.; Saeed, N.; Ashraf, Y.; Mukhtar, Z.; Habib, I.; Rauf, M.; Mansoor, S.
Expression of synthetic alanine aminotransferase gene improves nitrogen uptake and response in transgenic tobacco
Int. J. Agric. Biol.
23
744-750
2020
Hordeum vulgare (P52894)
-
Manually annotated by BRENDA team
Pena, P.A.; Quach, T.; Sato, S.; Ge, Z.; Nersesian, N.; Dweikat, I.M.; Soundararajan, M.; Clemente, T.
Molecular and phenotypic characterization of transgenic wheat and sorghum events expressing the barley alanine aminotransferase
Planta
246
1097-1107
2017
Hordeum vulgare (P52894), Hordeum vulgare
Manually annotated by BRENDA team