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Information on EC 2.4.2.26 - protein xylosyltransferase and Organism(s) Homo sapiens and UniProt Accession Q86Y38

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EC Tree
     2 Transferases
         2.4 Glycosyltransferases
             2.4.2 Pentosyltransferases
                2.4.2.26 protein xylosyltransferase
IUBMB Comments
Involved in the biosynthesis of the linkage region of glycosaminoglycan chains as part of proteoglycan biosynthesis (chondroitin, dermatan and heparan sulfates).
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This record set is specific for:
Homo sapiens
UNIPROT: Q86Y38
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Word Map
The taxonomic range for the selected organisms is: Homo sapiens
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria
Synonyms
xylt2, xt-ii, xylt-ii, xylosyltransferase 1, xylt-i, xylosyltransferase ii, xylosyltransferase 2, protein xylosyltransferase, peptide o-xylosyltransferase, udp-d-xylose:proteoglycan core protein beta-d-xylosyltransferase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
peptide O-xylosyltransferase
-
peptide O-xylosyltransferase 1
-
peptide-O-xylosyltransferase
-
UDP-alpha-D-xylose:proteoglycan core protein beta-D-xylosyltransferase
-
UDP-D-xylose:proteoglycan core protein b-d-xylosyltransferase
-
xylosyltransferase 1
-
xylosyltransferase I
xylosyltransferase-I
-
LARGE
-
-
peptide O-xylosyltransferase
-
peptide O-xylosyltransferase 1
-
peptide-O-xylosyltransferase
-
Rumi
-
in addition to protein O-glucosyltransferase activity, both human and mouse Rumi also show protein O-xylosyltransferase activity
UDP-D-xylose:core protein beta-D-xylosyltransferase
-
-
-
-
UDP-D-xylose:core protein xylosyltransferase
-
-
-
-
UDP-D-xylose:proteoglycan core protein b-d-xylosyltransferase
-
UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase
UDP-xylose-core protein beta-D-xylosyltransferase
-
-
-
-
uridine diphosphoxylose-core protein beta-xylosyltransferase
-
-
-
-
uridine diphosphoxylose-protein xylosyltransferase
-
-
-
-
XT-II
xylosyltransferase
-
-
xylosyltransferase 2
-
xylosyltransferase I
-
-
xylosyltransferase II
xylosyltransferase, uridine diphosphoxylose-core protein beta-
-
-
-
-
xylosyltransferases II
isozyme
XylT-I
-
-
XylT-II
additional information
-
the enzyme competes for the substrate UDP-D-xylose with glycogenin, EC 2.4.1.186, which utilizes UDP-D-xylose as an alternative substrate to UDP-D-glucose
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
UDP-alpha-D-xylose + [protein]-L-serine = UDP + [protein]-3-O-(beta-D-xylosyl)-L-serine
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pentosyl group transfer
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
UDP-alpha-D-xylose:protein beta-D-xylosyltransferase (configuration-inverting)
Involved in the biosynthesis of the linkage region of glycosaminoglycan chains as part of proteoglycan biosynthesis (chondroitin, dermatan and heparan sulfates).
CAS REGISTRY NUMBER
COMMENTARY hide
55576-38-0
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
UDP-D-xylose + biglycan
UDP + xylosyl-biglycan
show the reaction diagram
-
-
-
?
UDP-D-xylose + bikunin
UDP + ?
show the reaction diagram
-
-
-
?
UDP-D-xylose + bikunin
UDP + D-xylosyl-bikunin
show the reaction diagram
UDP-D-xylose + biotin-NHQEEEGSGGGQKK(5-fluorescein)-CONH2
UDP + biotin-NHQEEEG-(D-xylosyl)SGGGQKK(5-fluorescein)-CONH2
show the reaction diagram
UDP-D-xylose + DDDSIEGSGGR
UDP + DDDSIEG(D-xylosyl)SGGR
show the reaction diagram
-
-
-
?
UDP-D-xylose + DDDSIEGSGSGGR
UDP + DDD-(D-xylosyl)SIEGSGSGGR
show the reaction diagram
-
-
-
?
UDP-D-xylose + DSISGDDLGSGDLGSGDFQR
?
show the reaction diagram
UDP-D-xylose + fibroblast growth factor 2 peptide
?
show the reaction diagram
-
-
-
?
UDP-D-xylose + proteoglycan core protein
UDP + proteoglycan core protein with xyloserine
show the reaction diagram
the xylosyltransferases I and II catalyze the transfer of xylose from UDP-xylose to selected serine residues in the proteoglycan core protein, which is the initial and rate limiting step in glycosaminoglycan biosynthesis
-
-
?
UDP-D-xylose + QEEEGSGGGGQR
UDP + QEEEG-(D-xylosyl)-S-GGGGQR
show the reaction diagram
-
-
-
?
UDP-D-xylose + SIEGSGGR
UDP + D-xylosyl-SIEGSGGR
show the reaction diagram
-
-
-
?
UDP-D-xylose + silk fibroin
UDP + silk fibroin with xylosylserine
show the reaction diagram
-
-
-
?
UDP + fragment(1-24) of human basic fibroblast growth factor
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP + human basic fibroblast growth factor
UDP + ?
show the reaction diagram
-
transfer of xylose to the serine residue of the G-S-G-motif in the amino terminal end of human basic fibroblast growth factor
-
-
?
UDP-alpha-D-xylose + [protein]-L-serine
UDP + [protein]-3-O-(beta-D-xylosyl)-L-serine
show the reaction diagram
UDP-D-xylose + aggrecan
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + bamcan
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + betaglycan-1
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + bFGF-peptide
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + biglycan
UDP + D-xylosyl-biglycan
show the reaction diagram
UDP-D-xylose + bikunin
?
show the reaction diagram
UDP-D-xylose + bikunin
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + bikunin
UDP + D-xylosyl-bikunin
show the reaction diagram
UDP-D-xylose + bikunin-derived aminoterminus homologous peptide
UDP + xylosyl-serine bikunin-derived aminoterminus homologous peptide
show the reaction diagram
-
-
-
?
UDP-D-xylose + biotin-NH-QEEEGSGGGQKK(5-fluorescein)-CONH2
UDP + biotin-NH-QEEEG-(D-xylosyl)SGGGQKK(5-fluorescein)-CONH2
show the reaction diagram
UDP-D-xylose + biotin-NH-QEEEGSGGGQKK(5-fluorescein)-CONH2
UDP + biotin-NH-QEEEGS(D-xylosyl)GGGQKK(5-fluorescein)-CONH2
show the reaction diagram
best substrate known so far for XT-IImediated xylosylation
-
-
?
UDP-D-xylose + biotin-NHQEEEGSGGGQKK(5-fluorescein)-CONH2
UDP + biotin-NHQEEEG-(D-xylosyl)SGGGQKK(5-fluorescein)-CONH2
show the reaction diagram
UDP-D-xylose + cartilage chondroitin sulfate proteoglycan
UDP + cartilage chondroitin sulfate proteoglycan with xylosylserine
show the reaction diagram
-
degraded by hydrogen fluoride or trifluromethanesulfonic acid
-
-
?
UDP-D-xylose + CD44
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + collagen alpha2(IX)
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + DDDSIEGSGGR
UDP + DDDSIEG(D-xylosyl)SGGR
show the reaction diagram
UDP-D-xylose + DSISGDDLGSGDLGSGDFQR
?
show the reaction diagram
-
-
-
?
UDP-D-xylose + DSISGDDLGSGDLGSGDFQR
UDP + ?
show the reaction diagram
-
-
-
?
UDP-D-xylose + fibroblast growth factor 2
?
show the reaction diagram
-
-
-
?
UDP-D-xylose + fibroblast growth factor 2 fragment 1-24
?
show the reaction diagram
-
-
-
?
UDP-D-xylose + fibroblast growth factor 2 peptide
?
show the reaction diagram
-
-
-
?
UDP-D-xylose + glypican-1
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + GVEGSADFLK
UDP + GVEGS(-D-xylose)ADFLK
show the reaction diagram
-
derived from collagen X
-
?
UDP-D-xylose + KKDSGPY
UDP + KKDS(-D-xylose)GPY
show the reaction diagram
-
-
-
?
UDP-D-xylose + KTKGSGFFVF
UDP + KTKGS(-D-xylose)GFFVF
show the reaction diagram
-
-
-
?
UDP-D-xylose + L-APLP2
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + L-APP
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + neuroglycan C
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + NFDEIDRSGFGFN
UDP + NFDEIDRS(-D-xylose)GFGFN
show the reaction diagram
-
-
-
?
UDP-D-xylose + perlecan-1
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + perlecan-2
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + perlecan-3
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + phosphacan
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + PLVSSGEDEPK
UDP + ?
show the reaction diagram
-
derived from neurocan protein
D-xylose bound to a serine residue
?
UDP-D-xylose + proteoglycan core protein
UDP + proteoglycan core protein with xylosylserine
show the reaction diagram
the xylosyltransferases I and II catalyze the transfer of xylose from UDP-xylose to selected serine residues in the proteoglycan core protein, which is the initial and rate limiting step in glycosaminoglycan biosynthesis
-
-
?
UDP-D-xylose + QEEEGSGGGGQR
UDP + QEEEG(D-xylosyl)SGGGGQR
show the reaction diagram
-
-
-
?
UDP-D-xylose + QEEEGSGGGOK
UDP + QEEEGS(-D-xylose)GGGOK
show the reaction diagram
UDP-D-xylose + QEEEGSGGGQK
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + QEEEGSGGGQKK
UDP + QEEEG-(D-xylosyl)SGGGQKK
show the reaction diagram
-
the bikunin nuclear acceptor peptide QEEEGSGGGQKK is not a differential acceptor substrate for the human XylT isoenzymes but is a good acceptor substrate for total XylT activity measurements
-
-
?
UDP-D-xylose + SENEGSGMAEQK
UDP + SENEGS(-D-xylose)GMAEQK
show the reaction diagram
-
synthetic leukocyte-derived amyloid precursor-like protein homologous peptide
-
?
UDP-D-xylose + SENEGSGMAQQK
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + serglycin
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + silk fibroin
?
show the reaction diagram
-
-
-
?
UDP-D-xylose + silk fibroin
UDP + silk fibroin with xylosylserine
show the reaction diagram
UDP-D-xylose + syndecan
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + syndecan-1
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + syndecan-4
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + TENEGSGLTNIK
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + TENEGSGLTNIK
UDP + TENEG-(D-xylosyl)SGLTNIK
show the reaction diagram
-
the 3-A4-amyloid protein precursor protein peptide TENEGSGLTNIK is an acceptor substrate for XylT1
-
-
?
UDP-D-xylose + TENEGSGLTNIK
UDP + TENEGS(-D-xylose)GLTNIK
show the reaction diagram
-
synthetic leukocyte-derived beta-A4-amyloid protein precursor homologous peptide
-
?
UDP-D-xylose + testican-2
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + thrombomodulin
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + VCRSGSGLVGK
UDP + VCRSGSGLVGK
show the reaction diagram
-
derived from apolipoprotein J
D-xylose bound to a serine residue
?
UDP-D-xylose + versican-beta
UDP + ?
show the reaction diagram
-
-
-
-
?
UDP-D-xylose + WAGGDASGE
UDP + WAGGDAS(-D-xylose)GE
show the reaction diagram
-
-
-
?
UDP-D-xylose + [Val36,Val38]delta1[Gly92,Ile94]delta2bikunin
UDP + ?
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
UDP-D-xylose + proteoglycan core protein
UDP + proteoglycan core protein with xyloserine
show the reaction diagram
the xylosyltransferases I and II catalyze the transfer of xylose from UDP-xylose to selected serine residues in the proteoglycan core protein, which is the initial and rate limiting step in glycosaminoglycan biosynthesis
-
-
?
UDP-alpha-D-xylose + [protein]-L-serine
UDP + [protein]-3-O-(beta-D-xylosyl)-L-serine
show the reaction diagram
UDP-D-xylose + proteoglycan core protein
UDP + proteoglycan core protein with xylosylserine
show the reaction diagram
the xylosyltransferases I and II catalyze the transfer of xylose from UDP-xylose to selected serine residues in the proteoglycan core protein, which is the initial and rate limiting step in glycosaminoglycan biosynthesis
-
-
?
additional information
?
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Ca2+
activates
Mg2+
necessity for Mg2+ or Mn2+ ions for enzymatic activity
Mn2+
necessity for Mg2+ or Mn2+ ions for enzymatic activity
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Cu2+
enzyme activity is abolished by Cu2+
N-Phenylmaleimide
treatment shows no effect on wild-type XT-I but strongly inactivaets the cysteine mutants C461A and C574A
Ni2+
enzyme activity is abolished by Ni2+
Zn2+
enzyme activity is abolished by Zn2+
beta-mercaptoethanol
XT-II activity is completely abolished at a concentration 1% (v/v) beta-mercaptoethanol
CDP
23% residual activity at 10 mg/ml
CMP
45% residual activity at 10 mg/ml
Co2+
Co2+ reduces activity by more than 60% at 5 mM
CTP
8% residual activity at 10 mg/ml
Cu2+
complete inhibition at 5 mM
dithiothreitol
XT-II activity is completely abolished at a concentration of 1 mM dithiothreitol
Glycosaminoglycans
-
associate with the enzyme
-
heparin
Ni2+
complete inhibition at 5 mM
protamine
adding protamine to a final concentration of 10 mg/ml decreases XT-II activity 4fold
UDP
5% residual activity at 10 mg/ml
UMP
25% residual activity at 10 mg/ml
UTP
4% residual activity at 10 mg/ml
Zn2+
complete inhibition at 5 mM
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
transforming growth factor beta1
0.5-10 ng/ml transforming growth factor beta1 induce expression of isozyme XT-I
-
EDTA
84% activation at 25 mM
histone protein
activity gains 1.5fold when histone protein is added at a concentration of 0.1 mg/ml
-
protamine
adding protamine to a final concentration of 0.1 mg/ml stimulates XT-II activity at least 2fold
Sodium citrate
72% activation at 25 mM
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0009 - 0.0119
bikunin
-
0.0188
Aggrecan
-
isoenzyme XT-I
-
0.0179 - 0.0222
bamcan
-
0.0208
betaglycan-1
-
isoenzyme XT-I
-
0.0093 - 0.0137
bFGF-peptide
-
0.0097
biglycan
-
isoenzyme XT-I
-
0.0006 - 0.0656
bikunin
-
0.022
bikunin-derived aminoterminus homologous peptide
-
-
-
0.0019
Bio-QEEEGSGGGQKK-F
-
0.0025 - 0.0061
biotin-NH-QEEEGSGGGQKK(5-fluorescein)-CONH2
0.0052
biotin-NHQEEEGSGGGQKK(5-fluorescein)-CONH2
recombinant enzyme
0.155 - 0.19
cartilage chondroitin sulfate proteoglycan
-
0.0146
CD44
-
isoenzyme XT-I
-
0.0034
collagen alpha2(IX)
-
isoenzyme XT-I
-
0.062
fibroblast growth factor 2
recombinant enzyme
-
0.0191
fibroblast growth factor 2 fragment 1-24
-
-
0.0208 - 0.0223
fragment(1-24) of human basic fibroblast growth factor
-
0.0109 - 0.0171
glypican-1
-
2.67
GVEGSADFLK
-
-
0.0572
human basic fibroblast growth factor
-
native XT-I
-
8.27
KKDSGPY
-
-
3.625
KTKGSGFFVF
-
-
0.0104 - 0.0134
L-APLP2
0.0131
L-APP
-
XT-I
0.0032 - 0.0236
neuroglycan C
-
0.13
NFDEIDRSGFGFN
-
-
0.0133
perlecan-1
-
isoenzyme XT-I
-
0.0102 - 0.0145
perlecan-2
-
0.0094 - 0.0187
perlecan-3
-
0.0166
phosphacan
-
isoenzyme XT-I
-
0.39
PLVSSGEDEPK
-
-
0.022
QEEEGSGGGOK
-
-
0.022
QEEEGSGGGQK
-
-
0.019
SENEGSGMAEQK
-
-
0.019
SENEGSGMAQQK
-
-
0.0023 - 0.0111
serglycin
-
0.545 - 0.677
silk fibroin
-
0.0122 - 0.0178
syndecan
-
0.0074 - 0.0198
syndecan-1
-
0.0035 - 0.0141
syndecan-4
-
0.02
TENEGSGLTNIK
-
-
0.0082 - 0.0103
testican-2
-
0.0029 - 0.0182
Thrombomodulin
-
0.25
UDP-D-xylose
about
0.94
VCRSGSGLVGK
-
-
0.0127 - 0.0146
versican-beta
-
0.42
WAGGDASGE
-
-
0.0008
[Val36,Val38]delta1[Gly92,Ile94]delta2bikunin
-
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0363
biotin-NH-QEEEGSGGGQKK(5-fluorescein)-CONH2
-
XylT-I or XylT-II
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
5.95 - 14.52
biotin-NH-QEEEGSGGGQKK(5-fluorescein)-CONH2
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00007 - 0.00015
heparin
0.0019 - 0.0246
UDP
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.0000003
-
XylT-II, concentrated culture supernatant
0.002333
-
7087fold purified XylT-II
0.0285
-
purified enzyme
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7
-
assay at
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.5 - 9
pH 6.5: about 60% of maximal activity, pH 9.0: about 60% of maximal activity
6.5 - 8.5
pH 6.5: about 70% of maximal activity, pH 8.5: about 60% of maximal activity
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
34
-
assay at
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
15 - 37
15Ā°C: about 40% of maximal activity, 37Ā°C: maximal activity
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
cardiac fibroblast
Manually annotated by BRENDA team
mesenchymal stem cell. Xylosyltransferase 1 is the predominant xylosyltransferase in the early phase of chondrogenic stem cell differentiation and xylosyltransferase 2 is upregulated 7 days after induction
Manually annotated by BRENDA team
mesenchymal stem cell
Manually annotated by BRENDA team
-
XT-I mRNA is not expressed but XT-II mRNA
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I. Very low XT-I mRNA expression
Manually annotated by BRENDA team
-
unactivated platelets harbor significant XylT activity that is released upon activation with thrombin
Manually annotated by BRENDA team
-
XT-I mRNA is not expressed but XT-II mRNA
Manually annotated by BRENDA team
-
highest XT-II expression levels, low XT-I mRNA expression
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I
Manually annotated by BRENDA team
-
XT-I mRNA is not expressed but XT-II mRNA
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I. Very low XT-I mRNA expression
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I. Very low XT-I mRNA expression
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I. Very low XT-I mRNA expression
Manually annotated by BRENDA team
cardiac fibroblast
Manually annotated by BRENDA team
-
cell culture
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I. Very low XT-I mRNA expression
Manually annotated by BRENDA team
-
XT-I mRNA is not expressed but XT-II mRNA
Manually annotated by BRENDA team
-
XT-I mRNA is not expressed but XT-II mRNA
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I
Manually annotated by BRENDA team
mesenchymal stem cell. Xylosyltransferase 1 is the predominant xylosyltransferase in the early phase of chondrogenic stem cell differentiation and xylosyltransferase 2 is upregulated 7 days after induction
Manually annotated by BRENDA team
mesenchymal stem cell. Xylosyltransferase 1 is the predominant xylosyltransferase in the early phase of chondrogenic stem cell differentiation and xylosyltransferase 2 is upregulated 7 days after induction
Manually annotated by BRENDA team
-
isoforms XT-I and XT-II
Manually annotated by BRENDA team
-
isoform XT-I and XT-II
Manually annotated by BRENDA team
-
XT-II mRNA expression is higher than for XT-I. Very low XT-I mRNA expression
Manually annotated by BRENDA team
-
equal expression levels of XT-I and XT-II
Manually annotated by BRENDA team
-
of healthy and infertile men with oligo-, astheno- or teratozoospermia, and of men after vasectomy
Manually annotated by BRENDA team
-
highest activity
Manually annotated by BRENDA team
-
isoform XT-II, low content
Manually annotated by BRENDA team
-
equal expression levels of XT-I and XT-II
Manually annotated by BRENDA team
XT-I is highly expressed in testes
Manually annotated by BRENDA team
-
XT-I mRNA expression is higher than for XT-II
Manually annotated by BRENDA team
-
equal expression levels of XT-I and XT-II
Manually annotated by BRENDA team
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
isoform XT-II, type II transmembrane protein
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
the role of XT-I in osteoarthritis disease is examined. XT-I regulates glycosaminoglycan synthesis in human cartilage during early onset and late stage of osteoarthritis disease. Expression of XT-I gene is regulated by IL-1beta and by TGF-beta1. Forced expression of this enzyme by gene transfer in late stage osteoarthritis cartilage enhances glycosaminoglycan synthesis and stimulates cartilage repair
malfunction
-
LARGE gene silencing in Hep-G2 and HEK-EBNA cells does not affect SERPINC1 mRNA levels but significantly reduces the secretion of antithrombin with moderate intracellular retention
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
XYLT1_HUMAN
959
1
107569
Swiss-Prot
Secretory Pathway (Reliability: 4)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
120000
90000
1 * 90000, SDS-PAGE under reducing conditions
110000
gel filtration
120000
-
gel filtration, amino acid sequence determination
91000
-
x * 91000, isoform XT-I, amino acid sequence determination
95800
-
XylT-II, gel filtration
97000
additional information
-
enzyme activity is also detected in a peak of MW 500000
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
monomer
1 * 90000, SDS-PAGE under reducing conditions
monomer
-
1 * 120000, SDS-PAGE
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glycoprotein
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
C257A
2.3fold decrease in the ratio of Vmax to KM-value as compared to wild-type enzyme
C285A
5.4fold decrease in the ratio of Vmax to KM-value as compared to wild-type enzyme
C301A
2.3fold decrease in the ratio of Vmax to KM-value as compared to wild-type enzyme
C471A
complete loss of catalytic activity. N-phenylmaleimide treatment shows no effect on wild-type XT-I but strongly inactivates the cysteine mutant
C542A
2.9fold decrease in the ratio of Vmax to KM-value as compared to wild-type enzyme
C561A
UDP inhibition is significantly reduced
C563A
2fold decrease in the ratio of Vmax to KM-value as compared to wild-type enzyme
C574A
complete loss of catalytic activity. N-phenylmaleimide treatment shows no effect on wild-type XT-I but strongly inactivates the cysteine mutant
C675A
1.5fold increase in the ratio of Vmax to KM-value as compared to wild-type enzyme
C902A
1.5fold increase in the ratio of Vmax to KM-value as compared to wild-type enzyme
C927A
1.4fold decrease in the ratio of Vmax to KM-value as compared to wild-type enzyme
C933A
1.36fold increase in the ratio of Vmax to KM-value as compared to wild-type enzyme
D314G
80% of the activity of wild-type enzyme,Km-value for bikunin is 1.2fold higher than wild-type value
D316G
as active as wild-type enzyme, Km-value for bikunin is identical to wild-type value
D745E
mutant retains full activity, Km-value for bikunin is 1.2fold higher than wild-type value
D745G
loss of activity
D747E
reduced substrate affinity, about 35% of the wild-type activity, Km-value for bikunin is 4.4fold higher than wild-type value
D747G
reduced substrate affinity, about 35% of the wild-type activity, Km-value for bikunin is 7.7fold higher than wild-type value
W746D
about 25% of wild-type activity, Km-value for bikunin is 1.3fold higher than wild-type value
W746G
about 25% of wild-type activity, Km-value for bikunin is 1.3fold higher than wild-type value
W746N
about 25% of wild-type activity, Km-value for bikunin is 1.4fold higher than wild-type value
C276A
-
mutation results in a nearly inactive enzyme
DELTA1-184
-
KM-value for bikunin is identical to wild-type value, Vmax is 1.2fold higher than wild-type value
DELTA1-213
-
KM-value for bikunin is 1.6fold higher than wild-type value, Vmax is 1.1fold higher than wild-type value
DELTA1-260
-
KM-value for bikunin is 1.6fold higher than wild-type value, Vmax is identical to wild-type value
DELTA1-266
-
KM-value for bikunin is 5.6fold higher than wild-type value, Vmax is 1.6fold lower than wild-type value
DELTA1-272
-
KM-value for bikunin is 6fold higher than wild-type value, Vmax is 1.3fold lower than wild-type value
DELTA1-273
-
more than 98% of activity
DELTA261-272
-
inactive mutant enzyme
DELTA721-726
-
inactive mutant enzyme
E263A
-
KM-value for bikunin is 1.4fold higher than wild-type value, Vmax is 2fold higher than wild-type value
K262A
-
KM-value for bikunin is 1.2fold higher than wild-type value, Vmax is 1.7fold higher than wild-type value
K272A
-
KM-value for bikunin is 1.4fold higher than wild-type value, Vmax is 1.7fold higher than wild-type value
R270A
-
KM-value for bikunin is 1.2fold higher than wild-type value, Vmax is 1.4fold higher than wild-type value
S266A
-
KM-value for bikunin is 1.4fold higher than wild-type value, Vmax is 1.3fold higher than wild-type value
S269A
-
KM-value for bikunin is 1.3fold higher than wild-type value, Vmax is 1.1fold higher than wild-type value
additional information
-
truncation of 266, 272 and 273 amino acids in the N-terminal region results in a 70, 90 and above 98% loss in catalytic activity. Deletion of the single 12 amino acid motif G261KEAISALSRAK272 leads to a loss-of-function xylosyltransferase I mutant. Heparin binding is slightly altered in mutants lacking 289 or 568 amino acids, but deletion of the potential heparin-binding motif P721KKVFKI727 does not lead to a loss of heparin binding capacity
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
reaching a temperature of 37Ā°C, XT-II has 66% of the activity compared with 30Ā°C
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-80Ā°C, -20Ā°C or 4Ā°C, 3-4 weeks, no loss of activity
25Ā°C, 2 weeks, no loss of activity
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
by affinity chromatography
-
from cell culture supernatant
-
full-length XylT-II purified to homogeneity as inclusion bodies, by maltose binding protein affinity chromatography and heparin affinity chromatography
-
recombinant enzyme expressed in High Five insect cells
-
wild-type, and recombinant from CHO-K1 cells
-
XylT-II purified by fractionated ammonium sulfate precipitation, heparin affinity and ion exchange chromatography, 7087fold with a final yield of 2.6%
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in CHO cells, high five insect cells, HEK293 cells, and SaOS-2 cells, and in Pichia pastoris
expressed in the xylosyltransferase-deficient pgsA-745 (S745) CHO cell line and in Pichia pastoris
expression in Pichia pastoris
expression in Pichia pastoris. Soluble form of human XT-II is expressed in the xylosyltransferase-deficient pgsA-745 (S745) Chinese hamster ovary cell line
expression of XT-I-GFP and various GFP-tagged XT-I mutants with C-terminal truncations and deletions in HEK-293 and SaOS-2 cells
soluble active form of human XT-I is expressed in High Five insect cells, Trichoplusia ni
5' and 3' deletion constructs expressed in SW1353 cells
-
DNA sequence determination and analysis, chromosome mapping, functional expression of isoforms XT-I and XT-II in CHO-K1 cells, no activity when XT-II is expressed fused to the aminoterminal peptide tag, 8% of the recombinant activity is located in the cytosol and membranes, 92% recombinant activity is secreted into the medium
-
expressed as glutathione-S-transferase fusion proteins containing putative or known GAG attachment sites of in vivo proteoglycans. Cloned into the XhoI and EcoRI digested pGEX-6P-1 vector and ligated by T4 DNA ligase. Expressed in Escherichia coli BL21 DE3 cells
-
expressed in CHO cells, high five insect cells, HEK293 cells, and SaOS-2 cells, and in Pichia pastoris
expressed in Pichia pastoris strain X-33
expressed in the xylosyltransferase-deficient pgsA-745 (S745) CHO cell line and in Pichia pastoris
expressed in xylosyltransferase-deficient pgsA-745 CHO cells
expression in Pichia pastoris. Soluble form of human XT-II is expressed in the xylosyltransferase-deficient pgsA-745 (S745) Chinese hamster ovary cell line
expression in Pichia pastoris. Transfection of the xylosyltransferase-deficient Chinese hamster ovary mutant pgsA-745 with XT-II coding cDNA completely restores glycosaminoglycan biosynthesis
expression of various GFP-tagged XT-II mutants with C-terminal truncations and deletions in HEK-293 and SaOS-2 cells
high-level expression in High Five insect cells
-
into pGEX-6P-1, ligated into the multiple cloning site of the BamHI-digested and shrimp alkaline phosphatase-dephosphorylated pMAL-c4E expression vector, in frame with the N-terminal located maltose binding protein, expressed in Escherichia coli strain BL21(DE3) under the control of the IPTG inducible tac promoter. MBP/XylT-II fusion protein expressed in ER2507 that contains prolonged XylT-II fragments (MBP/XylT-IIF1-3 and MBP/XylT-IIF4-6)
-
soluble mutant enzymes of human XT-I with deletions at the N-terminal domain are expressed in insect cells
-
XylT-II cloned into the multiple cloning site of the pPICZ alphaA expression vector, in frame with the alpha-factor signal sequence and with a C-terminal located myc-epitope and hexa-histidine tag, expressed in Pichia pastoris strain X-33
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
XT-I gene expression is down-regulated by IL-1beta
XT-I gene expression is up-regulated by TGF-beta1
members of the activator protein 1 and specificity protein 1 family of transcription factors are necessary for the transcriptional regulation of the XYLT1 gene. Transcription factors of the specificity protein 1 family, especially specificity protein 3, are very likely involved in the regulation of the XT-I mRNA expression. A 531-bp core promoter element is able to drive the transcription on a basal level. A binding site for transcription factors of the activator protein 1 family, which is essential for full promoter activity is located 730 bp 5' of the translation initiation site. A promoter element containing this binding site is able to drive the transcription to about 79fold above control in SW1353 chondrosarcoma cells
-
SW1353 cells treated with curcumin (0.02 mM) and tanshinone IIA (0.1 mM), respectively, for 6 h show significantly reduced XT-I mRNA expression to 41.8% and 13.8%, respectively. SW1353 cells treated with different concentrations (10 nM to 0.001 mM) of mithramycin A for 24 h show a highly significant decrease of XT-I mRNA levels compared with nontreated cells. mRNA level of both specificity protein 1 and specificity protein 3 is significantly reduced to less than 30% compared with controls treated with a scrambled siRNA for a total of 96 h after transfection. The siRNA-mediated knockdown of specificity protein 1 has no detectable effect on the XT-I mRNA levels, whereas the knockdown of specificity protein 3 leads to a highly significant reduction to ca. 40% compared with controls. Decrease of 51% in the enzyme xylosyltransferase activity in the cell culture supernatant of specificity protein 3 siRNA-transfected cells compared with controls 96 h after transfection
-
XT-I gene expression is down-regulated by IL-1beta
-
XT-I gene expression is up-regulated by TGF-beta1
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
analysis
measurement of fibrosis marker xylosyltransferase I activity by HPLC electrospray ionization tandem mass spectrometry. The simple and robust LC-MS/MS assay permits the rapid and accurate determination of XT-I activity in human serum
medicine
diagnostics
-
the enzyme is a diagnostic marker of an enhanced proteoglycan biosynthesis
medicine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Brinkmann, T.; Weilke, C.; Kleesiek, K.
Recognition of acceptor proteins by UDP-D-xylose proteoglycan core protein beta-D-xylosyltransferase
J. Biol. Chem.
272
11171-11175
1997
Homo sapiens
Manually annotated by BRENDA team
Götting, C.; Kuhn, J.; Brinkmann, T.; Kleesiek, K.
Xylosylation of alternatively spliced isoforms of Alzheimer APP by xylosyltransferase
J. Protein Chem.
17
295-302
1998
Homo sapiens, Rattus norvegicus, Rattus norvegicus Lewis1WR1
Manually annotated by BRENDA team
Kuhn, J.; Götting, C.; Schnolzer, M.; Kempf, T.; Brinkmann, T.; Kleesiek, K.
First isolation of human UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase secreted from cultured JAR choriocarcinoma cells
J. Biol. Chem.
276
4940-4947
2001
Homo sapiens
Manually annotated by BRENDA team
Götting, C.; Kuhn, J.; Zahn, R.; Brinkmann, T.; Kleesiek, K.
Molecular cloning and expression of human UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase and its first isoform XT-II
J. Mol. Biol.
304
517-528
2000
Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Götting, C.; Kuhn, J.; Brinkmann, T.; Kleesiek, K.
Xylosyltransferase activity in seminal plasma of infertile men
Clin. Chim. Acta
317
199-202
2002
Homo sapiens
Manually annotated by BRENDA team
Götting, C.; Kuhn, J.; Tinneberg, H.R.; Brinkmann, T.; Kleesiek, K.
High xylosyltransferase activities in human follicular fluid and cultured granulosa-lutein cells
Mol. Hum. Reprod.
8
1079-1086
2002
Homo sapiens
Manually annotated by BRENDA team
Meezan, E.; Manzella, S.; Roden, L.
Menage a trois: glycogenin, proteoglycan core protein xylosyltransferase and UDP-xylose
Trends Glycosci. Glycotechnol.
7
303-332
1995
Bos taurus, Gallus gallus, Homo sapiens, Mus musculus, Rattus norvegicus
-
Manually annotated by BRENDA team
Kuhn, J.; Muller, S.; Schnolzer, M.; Kempf, T.; Schon, S.; Brinkmann, T.; Schottler, M.; Gotting, C.; Kleesiek, K.
High-level expression and purification of human xylosyltransferase I in High Five insect cells as biochemically active form
Biochem. Biophys. Res. Commun.
312
537-544
2003
Homo sapiens
Manually annotated by BRENDA team
Kuhn, J.; Schnolzer, M.; Schon, S.; Muller, S.; Prante, C.; Gotting, C.; Kleesiek, K.
Xylosyltransferase I acceptor properties of fibroblast growth factor and its fragment bFGF (1-24)
Biochem. Biophys. Res. Commun.
333
156-166
2005
Homo sapiens
Manually annotated by BRENDA team
Müller, S.; Schöttler, M.; Schön, S.; Prante, C.; Brinkmann, T.; Kuhn, J.; Götting, C.; Kleesiek, K.
Human xylosyltransferase I: functional and biochemical characterization of cysteine residues required for enzymic activity
Biochem. J.
386
227-236
2005
Homo sapiens (Q86Y38)
Manually annotated by BRENDA team
Götting, C.; Müller, S.; Schöttler, M.; Schön, S.; Prante, C.; Brinkmann, T.; Kuhn, J.; Kleesiek, K.
Analysis of the DXD motifs in human xylosyltransferase I required for enzyme activity
J. Biol. Chem.
279
42566-42573
2004
Homo sapiens (Q86Y38)
Manually annotated by BRENDA team
Mueller, S.; Disse, J.; Schoettler, M.; Schoen, S.; Prante, C.; Brinkmann, T.; Kuhn, J.; Kleesiek, K.; Goetting, C.
Human xylosyltransferase I and N-terminal truncated forms: functional characterization of the core enzyme
Biochem. J.
394
163-171
2006
Homo sapiens
Manually annotated by BRENDA team
Goetting, C.; Kuhn, J.; Kleesiek, K.
Human xylosyltransferases in health and disease
Cell. Mol. Life Sci.
64
1498-1517
2007
Homo sapiens (Q86Y38), Homo sapiens (Q9H1B5), Homo sapiens
Manually annotated by BRENDA team
Kuhn, J.; Prante, C.; Schoen, S.; Goetting, C.; Kleesiek, K.
Measurement of fibrosis marker xylosyltransferase I activity by HPLC electrospray ionization tandem mass spectrometry
Clin. Chem.
52
2243-2249
2006
Homo sapiens (Q86Y38)
Manually annotated by BRENDA team
Brunner, A.; Kolarich, D.; Voglmeir, J.; Paschinger, K.; Wilson, I.B.
Comparative characterisation of recombinant invertebrate and vertebrate peptide O-xylosyltransferases
Glycoconj. J.
23
543-554
2006
Caenorhabditis elegans (Q965Q8), Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens (Q86Y38), Homo sapiens
Manually annotated by BRENDA team
Schoen, S.; Prante, C.; Bahr, C.; Kuhn, J.; Kleesiek, K.; Goetting, C.
Cloning and recombinant expression of active full-length xylosyltransferase I (XT-I) and characterization of subcellular localization of XT-I and XT-II
J. Biol. Chem.
281
14224-14231
2006
Homo sapiens (Q86Y38), Homo sapiens (Q9H1B5), Homo sapiens
Manually annotated by BRENDA team
Poenighaus, C.; Ambrosius, M.; Casanova, J.C.; Prante, C.; Kuhn, J.; Esko, J.D.; Kleesiek, K.; Goetting, C.
Human xylosyltransferase II is involved in the biosynthesis of the uniform tetrasaccharide linkage region in chondroitin sulfate and heparan sulfate proteoglycans
J. Biol. Chem.
282
5201-5206
2007
Homo sapiens, Homo sapiens (Q9H1B5)
Manually annotated by BRENDA team
Voglmeir, J.; Voglauer, R.; Wilson, I.B.
XT-II, the second isoform of human peptide-O-xylosyltransferase, displays enzymatic activity
J. Biol. Chem.
282
5984-5990
2007
Homo sapiens (Q86Y38), Homo sapiens (Q9H1B5), Homo sapiens
Manually annotated by BRENDA team
Goetting, C.; Hendig, D.; Adam, A.; Schoen, S.; Schulz, V.; Szliska, C.; Kuhn, J.; Kleesiek, K.
Elevated xylosyltransferase I activities in Pseudoxanthoma elasticum (PXE) patients as a marker of stimulated proteoglycan biosynthesis
J. Mol. Med.
83
984-992
2005
Homo sapiens (Q86Y38), Homo sapiens
Manually annotated by BRENDA team
Casanova, J.C.; Kuhn, J.; Kleesiek, K.; Goetting, C.
Heterologous expression and biochemical characterization of soluble human xylosyltransferase II
Biochem. Biophys. Res. Commun.
365
678-684
2008
Homo sapiens (Q9H1B5), Homo sapiens
Manually annotated by BRENDA team
Prante, C.; Milting, H.; Kassner, A.; Farr, M.; Ambrosius, M.; Schoen, S.; Seidler, D.G.; Banayosy, A.E.; Koerfer, R.; Kuhn, J.; Kleesiek, K.; Goetting, C.
Transforming growth factor beta1-regulated xylosyltransferase I activity in human cardiac fibroblasts and its impact for myocardial remodeling
J. Biol. Chem.
282
26441-26449
2007
Homo sapiens (Q86Y38), Homo sapiens (Q9H1B5), Homo sapiens
Manually annotated by BRENDA team
Casanova, J.C.; Roch, C.; Kuhn, J.; Kleesiek, K.; Goetting, C.
First in-gel detection and purification of human xylosyltransferase II
Biochem. Biophys. Res. Commun.
379
243-248
2009
Homo sapiens
Manually annotated by BRENDA team
Casanova, J.C.; Ambrosius, M.; Kuhn, J.; Kleesiek, K.; Goetting, C.
Analysis of xylosyltransferase II binding to the anticoagulant heparin
Biochem. Biophys. Res. Commun.
383
4-10
2009
Homo sapiens
Manually annotated by BRENDA team
Roch, C.; Kuhn, J.; Kleesiek, K.; Goetting, C.
Differences in gene expression of human xylosyltransferases and determination of acceptor specificities for various proteoglycans
Biochem. Biophys. Res. Commun.
391
685-691
2010
Homo sapiens
Manually annotated by BRENDA team
Ambrosius, M.; Kleesiek, K.; Goetting, C.
The xylosyltransferase I gene polymorphism c.343G-T (p.A115S) is associated with decreased serum glycosaminoglycan levels
Clin. Biochem.
42
1-4
2009
Homo sapiens
Manually annotated by BRENDA team
Condac, E.; Dale, G.L.; Bender-Neal, D.; Ferencz, B.; Towner, R.; Hinsdale, M.E.
Xylosyltransferase II is a significant contributor of circulating xylosyltransferase levels and platelets constitute an important source of xylosyltransferase in serum
Glycobiology
19
829-833
2009
Homo sapiens, Mus musculus
Manually annotated by BRENDA team
Mueller, B.; Prante, C.; Kleesiek, K.; Goetting, C.
Identification and characterization of the human xylosyltransferase I gene promoter region
J. Biol. Chem.
284
30775-30782
2009
Homo sapiens
Manually annotated by BRENDA team
Venkatesan, N.; Barre, L.; Bourhim, M.; Magdalou, J.; Mainard, D.; Netter, P.; Fournel-Gigleux, S.; Ouzzine, M.
Xylosyltransferase-I regulates glycosaminoglycan synthesis during the pathogenic process of human osteoarthritis
PLoS ONE
7
e34020
2012
Homo sapiens (Q86Y38)
Manually annotated by BRENDA team
Takeuchi, H.; Fernandez-Valdivia, R.C.; Caswell, D.S.; Nita-Lazar, A.; Rana, N.A.; Garner, T.P.; Weldeghiorghis, T.K.; Macnaughtan, M.A.; Jafar-Nejad, H.; Haltiwanger, R.S.
Rumi functions as both a protein O-glucosyltransferase and a protein O-xylosyltransferase
Proc. Natl. Acad. Sci. USA
108
16600-16605
2011
Homo sapiens, Mus musculus
Manually annotated by BRENDA team
de la Morena-Barrio, M.; Buil, A.; Anton, A.; Martinez-Martinez, I.; Minano, A.; Gutierrez-Gallego, R.; Navarro-Fernandez, J.; Aguila, S.; Souto, J.; Vicente, V.; Soria, J.; Corral, J.
Identification of antithrombin-modulating genes. Role of LARGE, a gene encoding a bifunctional glycosyltransferase, in the secretion of proteins?
PLoS ONE
8
e64998
2013
Homo sapiens
Manually annotated by BRENDA team