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Information on EC 2.4.1.25 - 4-alpha-glucanotransferase and Organism(s) Arabidopsis thaliana and UniProt Accession Q9LV91

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EC Tree
     2 Transferases
         2.4 Glycosyltransferases
             2.4.1 Hexosyltransferases
                2.4.1.25 4-alpha-glucanotransferase
IUBMB Comments
This entry covers the former separate entry for EC 2.4.1.3 (amylomaltase). The plant enzyme has been termed D-enzyme. An enzymic activity of this nature forms part of the mammalian and yeast glycogen debranching system (see EC 3.2.1.33 amylo-alpha-1,6-glucosidase).
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This record set is specific for:
Arabidopsis thaliana
UNIPROT: Q9LV91
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Word Map
The taxonomic range for the selected organisms is: Arabidopsis thaliana
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
amylomaltase, d-enzyme, 4-alpha-glucanotransferase, disproportionating enzyme, amase, maltosyltransferase, alphagt, mq-01, alphagtase, alpha-1,4-glucanotransferase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
amylomaltase
D-enzyme
-
-
-
-
debranching enzyme maltodextrin glycosyltransferase
-
-
-
-
dextrin glycosyltransferase
-
-
-
-
dextrin glycosyltransferase,
-
-
-
-
dextrin transglycosylase
-
-
-
-
disproportionating enzyme
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
Transfers a segment of a (1->4)-alpha-D-glucan to a new position in an acceptor, which may be glucose or a (1->4)-alpha-D-glucan
show the reaction diagram
catalytic mechanism and domain structure and function
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hexosyl group transfer
-
-
-
-
PATHWAY SOURCE
PATHWAYS
-
-, -, -, -, -
SYSTEMATIC NAME
IUBMB Comments
(1->4)-alpha-D-glucan:(1->4)-alpha-D-glucan 4-alpha-D-glycosyltransferase
This entry covers the former separate entry for EC 2.4.1.3 (amylomaltase). The plant enzyme has been termed D-enzyme. An enzymic activity of this nature forms part of the mammalian and yeast glycogen debranching system (see EC 3.2.1.33 amylo-alpha-1,6-glucosidase).
CAS REGISTRY NUMBER
COMMENTARY hide
9032-09-1
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
maltotriose + maltotriose
maltooligosaccharides
show the reaction diagram
-
-
-
?
potato amylose + glycosyl acceptor
cycloamylose
show the reaction diagram
-
the enzyme can produce cycloamyloses in the range 16–50 glucose residues
-
?
1,4-alpha-D-glucan + 1,4-alpha-D-glucan
maltooligosaccharide
show the reaction diagram
-
-
-
?
1,4-alpha-D-glucan + 1,4-alpha-D-glucan
maltooligosaccharides
show the reaction diagram
it is proposed that a soluble heteroglycan is the in vivo substrate for DPE2. An alternative route to metabolize the glucan residues in soluble heteroglycane exists in Arabidopsis thaliana
-
-
?
maltodextrin + D-glucose
maltooligosaccharides
show the reaction diagram
-
-
-
?
maltoheptaose + maltopentaose
maltooligosaccharides
show the reaction diagram
maltotetraose + maltopentaose
maltooligosaccharides
show the reaction diagram
maltotriose + maltotriose
maltopentaose + D-glucose
show the reaction diagram
starch + glucose
maltotriose + ?
show the reaction diagram
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
1,4-alpha-D-glucan + 1,4-alpha-D-glucan
maltooligosaccharides
show the reaction diagram
it is proposed that a soluble heteroglycan is the in vivo substrate for DPE2. An alternative route to metabolize the glucan residues in soluble heteroglycane exists in Arabidopsis thaliana
-
-
?
additional information
?
-
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
aplanin
-
Bay e 4609, pseudooligosaccharide resembling amylose with a hydroxymethylconduritol unit and a 4-amino-4-deoxy-D-chinorose residue linked to a varying number of alpha-D-glucose units from 7-30
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
27.5
maltotriose
at pH 7.0 and 37 °C
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
580
maltotriose
at pH 7.0 and 37 °C
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
21.6
maltotriose
at pH 7.0 and 37 °C
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.1
calculated from amino acid sequence
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
DPE1_ARATH
576
0
64412
Swiss-Prot
Chloroplast (Reliability: 3)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
123000
gel filtration
66000
2 * 66000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
homodimer
2 * 66000, SDS-PAGE
additional information
DPE2 is a modular protein consisting of a family 77 glycosyl hydrolase domain, similar to DPE1, but unlike DPE1 the domain is interrupted by an insertion of about 150 amino acids as well as an N-terminal extension that consists of two carbohydrate binding modules, domain structure and functiosn, overview
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
the glycosyl hydrolase domain alone provides disproportionating activity with a much higher affinity for short maltodextrins than the complete wild-type enzyme, while absence of the carbohydrate binding modules completely abolishes activity with large complex carbohydrates, reflecting the presumed function of DPE2 in vivo
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4
-
no activity detected
489000
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
60
-
loses activity when incubated for 10 min
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
4°C, stable in 20 mM bis-Tris-propane buffer, pH 6.5, containing 10% glycerol, no loss of activity over 6 months
-
4°C, very stable over long periods
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Ni HiTrap column chromatography and Superdex 75 gel filtration
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21 Star (DE3) One Shot cells
DPE2, phylogenetic analysis
expression in Escherichia coli
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Lin, T.P.; Preiss, J.
Characterization of D-enzyme (4-alpha-glucanotransferase) in Arabidopsis leaf
Plant Physiol.
86
260-265
1988
Arabidopsis thaliana, Vicia faba, Daucus carota, Solanum lycopersicum, Spinacia oleracea
Manually annotated by BRENDA team
Kakefuda, G.; Duke, S.H.
Characterization of pea chloroplast D-enzyme (4-alpha-D-glucanotransferase)
Plant Physiol.
91
136-143
1989
Arabidopsis thaliana, Bacillus subtilis, Paenibacillus macerans, Bos taurus, Daucus carota, Escherichia coli, Solanum lycopersicum, Vigna radiata var. radiata, Pisum sativum, Solanum tuberosum, Spinacia oleracea, Triticum aestivum, Zea mays
Manually annotated by BRENDA team
Jeon, B.S.; Taguchi, H.; Sakai, H.; Ohshima, T.; Wakagi, T.; Matsuzawa, H.
4-alpha-glucanotransferase from the hyperthermophilic archaeon Thermococcus litoralis. Enzyme purification and characterization, and gene cloning, sequencing and expression in Escherichia coli
Eur. J. Biochem.
248
171-178
1997
Arabidopsis thaliana, Dictyoglomus thermophilum, Pyrococcus furiosus, Solanum tuberosum, Streptococcus mitis, Thermococcus litoralis
Manually annotated by BRENDA team
Colleoni, C.; Dauvillee, D.; Mouille, G.; Buleon, A.; Gallant, D.; Bouchet, B.; Morell, M.; Samuel, M.; Delrue, B.; d'Hulst, C.; Bliard, C.; Nuzillard, J.M.; Ball, S.
Genetic and biochemical evidence for the involvement of alpha-1,4 glucanotransferases in amylopectin synthesis
Plant Physiol.
120
993-1003
1999
Synechocystis sp., Arabidopsis thaliana, Chlamydomonas reinhardtii, Oryza sativa, Zea mays, Chlamydomonas reinhardtii 137C
Manually annotated by BRENDA team
Colleoni, C.; Dauvillee, D.; Mouille, G.; Morell, M.; Samuel, M.; Slomiany, M.C.; Lienard, L.; Wattebled, F.; d'Hulst, C.; Ball, S.
Biochemical characterization of the Chlamydomonas reinhardtii alpha-1,4 glucanotransferase supports a direct function in amylopectin biosynthesis
Plant Physiol.
120
1005-1014
1999
Arabidopsis thaliana, Chlamydomonas reinhardtii, Escherichia coli, Solanum tuberosum
Manually annotated by BRENDA team
Wattebled, F.; Ral, J.P.; Dauvillee, D.; Myers, A.M.; James, M.G.; Schlichting, R.; Giersch, C.; Ball, S.G.; D'Hulst, C.
STA11, a Chlamydomonas reinhardtii locus required for normal starch granule biogenesis, encodes disproportionating enzyme. Further evidence for a function of alpha-1,4 glucanotransferases during starch granule biosynthesis in green algae
Plant Physiol.
132
137-145
2003
Arabidopsis thaliana, Borreliella burgdorferi (O51188), Chlamydomonas reinhardtii, Chlamydomonas reinhardtii (Q9FDV9), Chlamydomonas reinhardtii 137C, Clostridium butyricum (Q59266), Escherichia coli, Oryza sativa, Pisum sativum, Saccharomyces cerevisiae, Solanum tuberosum, Solanum tuberosum (Q06801), Streptococcus pneumoniae (P0A4N1), Synechocystis sp., Zea mays
Manually annotated by BRENDA team
Kaper, T.; van der Maarel, M.J.; Euverink, G.J.; Dijkhuizen, L.
Exploring and exploiting starch-modifying amylomaltases from thermophiles
Biochem. Soc. Trans.
32
279-282
2004
Escherichia coli, Thermococcus litoralis, Thermococcus litoralis (O32462), Thermus aquaticus, Thermus aquaticus (B7A9X4), Aquifex aeolicus (O66937), Solanum tuberosum (Q06801), Thermotoga maritima (Q60035), Chlamydomonas reinhardtii (Q9FDV9), Arabidopsis thaliana (Q9LV91), Escherichia coli ML
Manually annotated by BRENDA team
Lu, Y.; Sharkey, T.D.
The role of amylomaltase in maltose metabolism in the cytosol of photosynthetic cells
Planta
218
466-473
2004
Arabidopsis thaliana
Manually annotated by BRENDA team
Lu, Y.; Steichen, J.M.; Yao, J.; Sharkey, T.D.
The role of cytosolic alpha-glucan phosphorylase in maltose metabolism and the comparison of amylomaltase in Arabidopsis and Escherichia coli
Plant Physiol.
142
878-889
2006
Arabidopsis thaliana (Q8RXD9), Escherichia coli
Manually annotated by BRENDA team
Steichen, J.M.; Petty, R.V.; Sharkey, T.D.
Domain characterization of a 4-alpha-glucanotransferase essential for maltose metabolism in photosynthetic leaves
J. Biol. Chem.
283
20797-20804
2008
Arabidopsis thaliana (Q8RXD9)
Manually annotated by BRENDA team
Tantanarat, K.; ONeill, E.; Rejzek, M.; Field, R.; Limpaseni, T.
Expression and characterization of 4-alpha-glucanotransferase genes from Manihot esculenta Crantz and Arabidopsis thaliana and their use for the production of cycloamyloses
Process Biochem.
49
84-89
2014
Manihot esculenta, Arabidopsis thaliana (Q9LV91)
-
Manually annotated by BRENDA team