Information on EC 2.4.1.25 - 4-alpha-glucanotransferase

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The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea

EC NUMBER
COMMENTARY hide
2.4.1.25
-
RECOMMENDED NAME
GeneOntology No.
4-alpha-glucanotransferase
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
Transfers a segment of a (1->4)-alpha-D-glucan to a new position in an acceptor, which may be glucose or a (1->4)-alpha-D-glucan
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hexosyl group transfer
-
-
-
-
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
glycogen degradation I
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-
glycogen degradation II
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Metabolic pathways
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Starch and sucrose metabolism
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starch degradation II
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starch degradation V
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sucrose biosynthesis II
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glycogen metabolism
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starch degradation
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SYSTEMATIC NAME
IUBMB Comments
(1->4)-alpha-D-glucan:(1->4)-alpha-D-glucan 4-alpha-D-glycosyltransferase
This entry covers the former separate entry for EC 2.4.1.3 (amylomaltase). The plant enzyme has been termed D-enzyme. An enzymic activity of this nature forms part of the mammalian and yeast glycogen debranching system (see EC 3.2.1.33 amylo-alpha-1,6-glucosidase).
CAS REGISTRY NUMBER
COMMENTARY hide
9032-09-1
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
strains CBS 513.88, NRRL3122, and N402, isozymes AgtA and AgtB encoded by genes agtA and agtB
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-
Manually annotated by BRENDA team
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-
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Manually annotated by BRENDA team
bovine
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-
Manually annotated by BRENDA team
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-
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Manually annotated by BRENDA team
carrot
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-
Manually annotated by BRENDA team
strain ML 30
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-
Manually annotated by BRENDA team
chicken
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-
Manually annotated by BRENDA team
barley
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-
Manually annotated by BRENDA team
sweet potato
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-
Manually annotated by BRENDA team
cultivar KU50
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-
Manually annotated by BRENDA team
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-
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Manually annotated by BRENDA team
NRRL B3389
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-
Manually annotated by BRENDA team
KOD1
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-
Manually annotated by BRENDA team
KOD1
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-
Manually annotated by BRENDA team
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-
-
Manually annotated by BRENDA team
tomato
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Manually annotated by BRENDA team
spinach
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-
Manually annotated by BRENDA team
dogfish
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-
Manually annotated by BRENDA team
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-
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Manually annotated by BRENDA team
strain P2, gene treX
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Manually annotated by BRENDA team
strain YT-1
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Manually annotated by BRENDA team
broad bean, L.major
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Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
MQ-01 fails to exhibit mutagenic activity and does not display clastogenic properties in Chinese hamster lung fibroblast cells. In a 13-week subchronic toxicity study in rats, oral administration of MQ-01 at doses of up to 15 ml/kg body weight/day do not produce compound-related clinical signs or toxicity, changes in body weight gain, food consumption, hematology, clinical chemistry, urinalysis, organ weights, or in any gross and microscopic findings, overview
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
(alpha-1,4 glucan)m + (alpha-1,4 glucan)n
(alpha-1,4 glucan)m-x + (alpha-1,4 glucan)n+x
show the reaction diagram
-
-
-
-
r
(alpha-1,4-D-glucan)m + (alpha-1,4-D-glucan)m
cyclic(alpha-1,4-glucan)x + (alpha-1,4-D-glucan)m-x
show the reaction diagram
(alpha-1,4-D-glucan)m + (alpha-1,4-D-glucan)n
(alpha-1,4-D-glucan)m-x + (alpha-1,4-D-glucan)n+x
show the reaction diagram
(alpha-1,4-D-glucan)m + H2O
(alpha-1,4-D-glucan)x + (alpha-1,4-D-glucan)m-x
show the reaction diagram
1,4-alpha-D-glucan + 1,4-alpha-D-glucan
maltooligosaccharide
show the reaction diagram
1,4-alpha-D-glucan + 1,4-alpha-D-glucan
maltooligosaccharides
show the reaction diagram
1,4-alpha-D-glucan + glucose
maltooligosaccharides
show the reaction diagram
2-chloro-4-nitrophenyl 4'''',6''''-O-(3-oxobutylidene)maltopentaoside + D-glucose
?
show the reaction diagram
-
the disproportionation reaction of the enzyme involves a ping-pong bi-bi mechanism. On the basis of this reaction mechanism, the glycosyl-enzyme intermediate, in which a donor substrate is covalently bound to the catalytic nucleophile, is trapped by treating the enzyme with 3-ketobutylidene-beta-2-chloro-4-nitrophenyl maltopentaoside in the absence of an acceptor and is detected by matrix-assisted laser desorption ionization time-of-flight mass spectrometry after peptic digestion
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-
?
6-O-alpha-D-glucosyl-cyclodextrins + H2O
D-glucose + cyclodextrins
show the reaction diagram
-
-
-
?
6-O-alpha-D-glucosyl-cyclomalto-octaose + H2O
glucose + cyclodextrins
show the reaction diagram
-
-
-
?
6-O-alpha-D-glucosyl-cyclomaltoheptaose + H2O
D-glucose + cyclodextrins
show the reaction diagram
64-O-alpha-maltooligosyl-pyridylamino-maltooctaose + maltohexaose
64-O-alpha-D-glucosyl-pyridylamino-maltooctaose + ?
show the reaction diagram
-
4-alpha-glucanotransferase action of porcine liver GDE on four 64-O-alpha-maltooligosyl-pyridylamino-maltooctaoses, in the presence or absence of an acceptor, maltohexaose, overview
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-
?
amylomaize V + glycosyl acceptor
cycloamylose + ?
show the reaction diagram
-
-
-
-
?
amylopectin + D-glucose
small oligosaccharides
show the reaction diagram
-
without maltose
?
amylopectin + maltopentaose
maltooligosaccharides
show the reaction diagram
amylopectin + maltose
?
show the reaction diagram
-
Gtase
-
-
?
amylose
?
show the reaction diagram
amylose
cycloamylose
show the reaction diagram
-
the enzyme produces a cycloamylose with a minimum degree of polymerization of 16
-
-
?
amylose + ?
cycloamylose + ?
show the reaction diagram
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-
-
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?
amylose + D-glucose
low molecular mass oligosaccharides
show the reaction diagram
amylose + glycosyl acceptor
?
show the reaction diagram
-
-
-
?
amylose + maltopentaose
cyclic alpha-1,4-glucan
show the reaction diagram
amylose + maltopentaose
maltooligosaccharides
show the reaction diagram
amylose + maltose
?
show the reaction diagram
-
Gtase
-
-
?
cassava starch + glycosyl acceptor
maltooligosaccharides
show the reaction diagram
-
-
-
-
?
corn starch + glycosyl acceptor
?
show the reaction diagram
-
-
-
?
corn starch + glycosyl acceptor
large-ring cyclodextrins
show the reaction diagram
cycloamylose + D-glucose
?
show the reaction diagram
-
-
-
-
?
dodecyl-beta-maltoside + alpha-cyclodextrin
dodecyl-beta-maltooctaoside + ?
show the reaction diagram
-
-
-
-
?
dodecyl-beta-maltoside + starch
dodecyl-beta-maltooctaoside + ?
show the reaction diagram
-
when starch is used as glycosyl donor in the CGTase catalyzed alkyl glycoside elongation reaction, it is important to choose reaction conditions under which the cyclization of starch to alpha-cyclodextrin is efficient, since alpha-cyclodextrin may form low reactivity complexes with dodecyl-beta-maltoside
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-
?
Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha(1,4)(Glc-alpha-(1,4)-Glc-alpha-(1,4)Glc-alpha-(1,4)-Glc-alpha-(1,6))Glc-alpha-(1,4)-Glc-alpha(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-(1-deoxy-1-[(2-pyridyl)amino]-D-glucitol)
Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)(Glc-alpha-(1,6))Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-(1-deoxy-1-[(2-pyridyl)amino]-D-glucitol) + Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-Glc-alpha-(1,4)-(1-deoxy-1-[(2-pyridyl)amino]-D-glucitol)
show the reaction diagram
-
i.e. B5/84 + G6PA
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-
?
Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)(Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,6))Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)Glc-pyridylamine + H2O
maltotriose + Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)(Glcalpha(1,6))Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)Glcalpha(1,4)Glc-pyridylamine
show the reaction diagram
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-
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?
glutinous-rice starch + glycosyl acceptor
large-ring cyclodextrins
show the reaction diagram
glycogen + glycosyl acceptor
maltooligosaccharides
show the reaction diagram
-
-
-
-
?
glycogen + maltooligosaccharides
D-glucose + ?
show the reaction diagram
-
-
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?
linear maltooligosaccharides + starch
?
show the reaction diagram
maltheptaose + maltoheptaose
?
show the reaction diagram
maltodextrin + D-glucose
maltooligosaccharides
show the reaction diagram
-
-
-
?
maltodextrin + maltodextrin
maltooligosaccharides
show the reaction diagram
maltodextrin + maltose
maltooligosaccharides + D-glucose
show the reaction diagram
-
-
-
?
maltodextrin + maltose
maltooligosaccharides + H2O
show the reaction diagram
maltoheptaose + maltoheptaose
?
show the reaction diagram
-
-
-
?
maltoheptaose + maltoheptaose
D-glucose + maltooligosaccharides
show the reaction diagram
maltoheptaose + maltoheptaose
maltooligosaccharides
show the reaction diagram
-
-
-
-
?
maltoheptaose + maltopentaose
maltooligosaccharides
show the reaction diagram
maltoheptaose + maltotriose
maltononaose + D-glucose
show the reaction diagram
-
D-enzyme
-
?
maltohexaose + maltodextrin
D-glucose + maltopentaose
show the reaction diagram
-
only amylomaltase, no polymers larger than the initial maltodextrin substrate, maltohexaose is a good donor substrate, but unable to function as an acceptor
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?
maltohexaose + maltohexaose
?
show the reaction diagram
-
-
-
?
maltohexaose + maltohexaose
D-glucose + maltooligosaccharides
show the reaction diagram
maltohexaose + maltohexaose
maltooligosaccharides
show the reaction diagram
-
-
-
-
?
maltohexaose + maltopentaose
maltooligosaccharides
show the reaction diagram
maltohexaose + maltotriose
D-glucose + maltooligosaccharides
show the reaction diagram
-
-
-
?
maltohexaose + maltotriose
maltodextrins
show the reaction diagram
maltohexose + maltohexose
maltooligosaccharides
show the reaction diagram
maltononaose + maltotriose
maltoundecaose + D-glucose
show the reaction diagram
-
D-enzyme
-
?
maltooligosaccharides
maltooligosaccharides + D-glucose
show the reaction diagram
-
-
-
?
maltopentaitol
maltohexaitol + ?
show the reaction diagram
maltopentaose + maltodextrin
maltose + higher dextrins
show the reaction diagram
-
-
-
?
maltopentaose + maltopentaose
?
show the reaction diagram
-
-
-
?
maltopentaose + maltopentaose
D-glucose + maltooligosaccharides
show the reaction diagram
maltopentaose + maltopentaose
maltooligosaccharides
show the reaction diagram
maltopentaose + maltopentaose
new oligosaccharides
show the reaction diagram
maltopentaose + maltotriose
D-glucose + maltooligosaccharides
show the reaction diagram
maltopentaose + maltotriose
homologous 1,4-alpha-D-glucans
show the reaction diagram
-
amylomaltose
-
?
maltopentaose + maltotriose
maltodextrins
show the reaction diagram
maltopentaose + maltotriose
maltoheptaose + D-glucose
show the reaction diagram
-
D-enzyme
-
?
maltose + (1,4-alpha-glucan)n+1
D-glucose + (1,4-alpha-glucan)n+1
show the reaction diagram
maltose + beta-cyclodextrin
6-O-alpha-maltosyl-beta-cyclodextrin
show the reaction diagram
maltose + maltose
?
show the reaction diagram
-
worst substrate
-
-
?
maltose + maltose
maltooligosaccharides
show the reaction diagram
maltose + maltose
maltooligosaccharides + D-glucose
show the reaction diagram
-
-
-
?
maltose + maltose
maltotriose + glucose
show the reaction diagram
maltose + maltosyl-beta-cyclodextrin
?
show the reaction diagram
maltosyl-alpha-(1->6)-puerarin
?
show the reaction diagram
-
i.e. maltosyl-daidzein 8-C-glucoside
combined action of maltogenic amylase reactions from Bacillus stearothermophilus and 4-alpha-glucanotransferase from Thermus scotoductus increases the water solubility of puerarin, an isoflavonoid derived from Radix puerariae
-
?
maltosylsucrose
?
show the reaction diagram
maltotetraitol
maltopentaitol + ?
show the reaction diagram
maltotetraose + maltodextrin
maltose + higher dextrins
show the reaction diagram
-
-
-
?
maltotetraose + maltopentaose
maltooligosaccharides
show the reaction diagram
maltotetraose + maltotetraose
?
show the reaction diagram
-
-
-
?
maltotetraose + maltotetraose
D-glucose + maltooligosaccharides
show the reaction diagram
maltotetraose + maltotetraose
maltooligosaccharides
show the reaction diagram
maltotetraose + maltotriose
D-glucose + maltooligosaccharides
show the reaction diagram
maltotetraose + maltotriose
glucose + maltoheptaose + maltodecaose
show the reaction diagram
-
D-enzyme
-
?
maltotetraose + maltotriose
homologous 1,4-alpha-glucans
show the reaction diagram
-
amylomaltose
-
?
maltotetraose + maltotriose
maltodextrins
show the reaction diagram
maltotheptaose + maltotriose
D-glucose + maltooligosaccharides
show the reaction diagram
-
-
-
?
maltotheptaose + maltotriose
maltodextrins
show the reaction diagram
maltotriose
maltooligosaccharides
show the reaction diagram
maltotriose + amylopectin
?
show the reaction diagram
-
-
-
-
?
maltotriose + glycosyl acceptor
D-glucose + maltose + maltotetraose + maltopentaose + maltohexaose
show the reaction diagram
-
-
-
?
maltotriose + maltodextrin
maltopentaose + ?
show the reaction diagram
maltotriose + maltodextrin
maltose + higher dextrins
show the reaction diagram
maltotriose + maltotriose
?
show the reaction diagram
-
-
-
-
-
maltotriose + maltotriose
D-glucose + maltooligosaccharides
show the reaction diagram
maltotriose + maltotriose
D-glucose + maltopentaose
show the reaction diagram
-
-
-
-
?
maltotriose + maltotriose
D-glucose + maltopentaose + maltoheptaose + maltononaose + maltoundecaose
show the reaction diagram
-
D-enzyme
-
?
maltotriose + maltotriose
glucose + maltooligosaccharides
show the reaction diagram
-
-
-
?
maltotriose + maltotriose
homologous alpha-1,4-D-glucans
show the reaction diagram
-
amylomaltose
-
?
maltotriose + maltotriose
maltodextrins
show the reaction diagram
maltotriose + maltotriose
maltooligosaccharides
show the reaction diagram
maltotriose + maltotriose
maltooligosaccharides + D-glucose
show the reaction diagram
-
-
-
?
maltotriose + maltotriose
maltopentaose + D-glucose
show the reaction diagram
maltotriose + maltotriose
maltopentaose + maltotetraose
show the reaction diagram
p-nitrophenyl-beta-D-galactopyranoside + ?
?
show the reaction diagram
-
-
-
-
?
pea starch + glycosyl acceptor
?
show the reaction diagram
-
-
-
-
?
pea starch + glycosyl acceptor
cycloamylose + ?
show the reaction diagram
-
-
-
-
?
pea starch + glycosyl acceptor
large-ring cyclodextrins
show the reaction diagram
phi-dextrin
?
show the reaction diagram
-
-
-
-
?
potato amylose + glycosyl acceptor
cycloamylose
show the reaction diagram
potato amylose + glycosyl acceptor
cycloamylose + ?
show the reaction diagram
-
-
-
-
?
potato starch + glycosyl acceptor
?
show the reaction diagram
-
-
-
-
?
potato starch + maltose
large-ring cyclodextrins
show the reaction diagram
rice starch + glycosyl acceptor
large-ring cyclodextrins
show the reaction diagram
soluble potato starch + glycosyl acceptor
?
show the reaction diagram
-
-
-
-
?
starch + 2-deoxy-D-glucose
?
show the reaction diagram
starch + cellobiose
?
show the reaction diagram
-
-
-
-
?
starch + D-allose
oligosaccharides terminated by 4-O-alpha-D-glucopyranosyl-D-allose
show the reaction diagram
-
-
-
?
starch + D-glucosamine
?
show the reaction diagram
-
-
-
-
?
starch + D-glucose
low molecular mass oligosaccharides
show the reaction diagram
starch + D-glucose
oligosaccharides
show the reaction diagram
starch + D-mannose
oligosaccharides terminated by 4-O-alpha-D-glucopyranosyl-D-mannose
show the reaction diagram
-
-
-
?
starch + D-sucrose
?
show the reaction diagram
-
-
-
-
?
starch + D-xylose
oligosaccharides terminated by 4-O-alpha-D-glucopyranosyl-D-xylose
show the reaction diagram
-
-
-
?
starch + glucose
maltotriose + ?
show the reaction diagram
starch + glycosyl acceptor
glucose + maltose + other oligosaccharides
show the reaction diagram
-
-
-
?
starch + isomaltose
?
show the reaction diagram
-
-
-
-
?
starch + L-sorbose
?
show the reaction diagram
-
-
-
-
?
starch + maltopentaose
alpha-1,4-D-glucans
show the reaction diagram
starch + maltose
?
show the reaction diagram
-
Gtase
-
-
?
starch + methyl-alpha-D-glucoside
?
show the reaction diagram
starch + methyl-beta-D-glucoside
?
show the reaction diagram
-
-
-
-
?
starch + N-acetyl-D-glucosamine
oligosaccharides terminated by 4-O-alpha-D-glucopyranosyl-N-acetyl-D-glucosamine
show the reaction diagram
-
-
-
?
starch + phenyl-alpha-D-glucoside
?
show the reaction diagram
-
-
-
-
?
starch + phenyl-beta-D-glucoside
?
show the reaction diagram
-
-
-
-
?
tapioca starch + glycosyl acceptor
large-ring cyclodextrins
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATES
NATURAL PRODUCTS
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
1,4-alpha-D-glucan + 1,4-alpha-D-glucan
maltooligosaccharides
show the reaction diagram
maltodextrin + maltose
maltooligosaccharides + D-glucose
show the reaction diagram
P15977
-
-
-
?
maltodextrin + maltose
maltooligosaccharides + H2O
show the reaction diagram
maltopentaose + maltopentaose
maltooligosaccharides
show the reaction diagram
additional information
?
-
INHIBITORS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
-
D-enzyme, slight inhibition
acarbose
aplanin
-
Bay e 4609, pseudooligosaccharide resembling amylose with a hydroxymethylconduritol unit and a 4-amino-4-deoxy-D-chinorose residue linked to a varying number of alpha-D-glucose units from 7-30
beta-cyclodextrin
-
a mixed-type inhibitor
cyclomaltohexaose
-
inhibition 25%
dithiothreitol
-
D-enzyme, slight inhibition
EDTA
-
D-enzyme, slight inhibition
Fe2+
-
D-enzyme, 50% inhibition
methyl-alpha-D-glucoside
-
competitive inhibition
Monoiodoacetic acid
-
-
N-bromosuccinimide
-
51.2% residual activity at 0.1 mM
p-chloromercuribenzoic acid
phenyl-beta-D-glucoside
-
competitive inhibition
Tris
-
D-enzyme, 50 mM, 35% inhibition
Zn2+
-
D-enzyme
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
alpha-cyclodextrin
-
activates GDE in liver
beta-cyclodextrin
-
activates GDE in liver
cyclodextrin
-
the extent of 4-alpha-glucanotransferase activation increases with cyclodextrin concentration before reaching a constant value
-
DMSO
-
increases the enzyme's hydrolytic activity
gamma-cyclodextrin
-
activates GDE in liver
maltoheptaose
-
stimulating effect of maltooligosaccharides on the conversion of amylose, 15 mM, relative activity 124%
maltohexaose
-
stimulating effect of maltooligosaccharides on the conversion of amylose, 15 mM, relative activity 144%
maltopentaose
-
stimulating effect of maltooligosaccharides on the conversion of amylose, 15 mM, relative activity 210%
maltose
-
stimulating effect of maltooligosaccharides on the conversion of amylose, relative activity 259%
maltotetraose
-
stimulating effect of maltooligosaccharides on the conversion of amylose, 15 mM, relative activity 246%
maltotriose
-
stimulating effect of maltooligosaccharides on the conversion of amylose, 15 mM, relative activity 210%
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
10.5 - 11.2
6-O-alpha-D-glucosyl-cyclomaltoheptaose
18
dodecyl-beta-maltoside
-
pH 5.2, 60°C, 300 mM alpha-cyclodextrin
1.5 - 5.7
maltoheptaose
3.2 - 4.5
maltohexaose
4.2 - 6.9
maltopentaose
8.3 - 71
maltose
1.591
maltosyl-beta-cyclodextrin
-
pH 5.5, 75°C
2.1 - 7.1
maltotetraose
2 - 165
maltotriose
2.8 - 3
phi-dextrin
-
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1.99 - 213
maltoheptaose
3.26 - 304
maltohexaose
3.98 - 329
maltopentaose
1.3
maltose
Aquifex aeolicus
-
pH 6.6, 70°C
0.0113
maltosyl-beta-cyclodextrin
Sulfolobus solfataricus
-
pH 5.5, 75°C
0.97 - 425
maltotetraose
0.0017 - 894
maltotriose
additional information
additional information
Pyrococcus furiosus
-
-
-
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00035 - 21.6
maltotriose
188
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.003 - 0.004
acarbose
0.0556
beta-cyclodextrin
-
pH 5.5, 75°C, recombinant His-tagged enzyme
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.0027
mutant E758Q
1.36
-
-
5.19
wild-type enzyme
5.84
-
purified recombinant His-tagged enzyme
6.2
-
mutant Y172A, pH 6.0, 30°C
21.8
-
wild-type, pH 6.0, 30°C
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7
-
recombinant enzyme
7.5 - 8
-
-
7.6 - 7.7
-
both amylomaltase and D-enzyme
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4 - 6
-
-
4 - 7.5
pH dependence of wild-type and mutant enzymes, D293N and E340Q are active below pH 6.5 and pH 5.5, respectively, but precipitate during the necessary prolonged incubation times, wild-type Tt AMase precipitates below pH 5.5 under similar extended incubation times as well, overview
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
70 - 75
-
assay at
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
30 - 55
-
-
60 - 100
-
60°C: about 50% of maximal activity, 100°C: about 30% of maximal activity
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
-
Manually annotated by BRENDA team
-
the enzyme is present in the amyloplast of developing endosperm
Manually annotated by BRENDA team
PDB
SCOP
CATH
ORGANISM
UNIPROT
Aquifex aeolicus (strain VF5)
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Escherichia coli (strain K12)
Escherichia coli (strain K12)
Escherichia coli (strain K12)
Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)
Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)
Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
38000
-
1 * 38000 + 1 * 47000, amylomaltase
47000
-
1 * 38000 + 1 * 47000, amylomaltase
50000
-
2 * 50000, SDS-PAGE
51900
-
SDS-PAGE
52000
-
1 * 52000 + 1 * 63000, D-enzyme
53000
-
SDS-PAGE
54000
-
gel filtration
57000
-
x * 57000, recombinant enzyme, SDS-PAGE
57969
-
x * 57969, calculated from sequence
59337
x * 59337, sequence calculation
59400
-
2 * 59400, calculated from amino acid sequence
59500
native enzyme, SDS-PAGE
63000
-
1 * 52000 + 1 * 63000, D-enzyme
64950
estimated from amino acid sequence, deduced from nucleotide sequence
65000
precursor, SDS-PAGE
66000
-
2 * 66000, SDS-PAGE
70000 - 80000
-
sedimentation equilibrium
76690
-
calculated from cDNA
77880
-
calculated from cDNA
78000
-
2 * 78000, calculated from sequence
78500
x * 78500, calculated from amino acid sequence
79000
-
SDS-PAGE
83000
-
x * 83000, SDS-PAGE
87000
-
gel filtration
93000
-
SDS-PAGE
98000
-
gel filtration
115000
-
D-enzyme, gel filtration
117000
-
gel filtration
120000
-
1 * 120000, PAGE
123000
-
gel filtration
124000
-
strain Ml 30
134000
-
gel filtration
155000
-
sedimentation equilibrium
160000
-
x * 160000, SDS-PAGE
164000
-
high-speed sedimentation equilibrium
165000
-
purified recombinant enzyme, SDS-PAGE
166000
-
SDS-PAGE
168000
-
gel filtration
170000
-
gel filtration
174900
-
estimated from amino acid sequence, deduced from nucleotide sequence
270000
-
approach-to-equilibrium method
370000
-
gel filtration, high molecular weight form
SUBUNITS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer or tetramer
homodimer
monomer
tetramer
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glycolipoprotein
-
the enzyme is cell wall-associated via glycosylphosphatidylinositol anchoring
Crystallization/COMMENTARY
ORGANISM
UNIPROT
LITERATURE
sitting drop vapor diffusion method, using 0.1 M bis-Tris pH 5.5 and 2.0 M ammonium sulfate
-
hanging drop vapor diffusion method, using 20% (w/v) PEG-3350
hanging-drop vapour-diffusion method. Crystal diffracts to 2.0 A resolution and belongs to space group C222(1), with unit-cell parameters a = 69.7, b = 120.3, c = 174.2 A
-
TreX in complex with an acarbose ligand, microbatch method under oil at 18°C, dimeric crystal from 16% PEG 8000, 0.2 M NaCl, and 0.1 M CHES buffer, pH 9.5, tetrameric crystal form from 2.2 M ammonium phosphate and 0.1 M Tris-HCl buffer, pH 8.5. For the acarbose intermediate complex crystal, 0.1% acarbose is added to the protein, followed by incubation for 1 h prior to the setup of the crystal in 8% PEG 3000, 0.2M lithium sulfate, and 0.1 M imidazole buffer, pH 8.0, cyroprotection by 20% glycerol in mother liquor, in both crystal forms, the asymmetric unit consists of one dimer, X-ray diffraction structure determination and analysis at 2.8-3.0 A resolution
crystallized in 2 forms, I and II, form I crystals belongs to hexagonal space group P6(4)22, form II crystals to orthorhombic space group P2(1)2(1)2; hanging drop vapor diffusion method at 25°C, crystal structure of the enzyme with and without an inhibitor, acarbose. The acarbose-bound structure clarifies that Glu123 and Asp214 are the catalytic nucleophile and acid/base catalyst, respectively
-
Gtase, hanging drop method, inhibitor complex,crystals belong to space group I222, unit-cell dimensions a = 92.6 A, b = 180.3 A, c = 199.2 A, free Gtase crystals a = 94.5 A, b = 181.4 A, c = 197.3 A
-
crystals belong to space group P6(4) with cell parameters a = b = 154 A and c = 64 A
-
to 2.3 A resolution. Structure shows a pattern of conformational flexibility in the 250s loop with higher B-factor. The conformational flexibility of the loop may be involved in substrate binding in the GH77 family
purified recombinant enzyme, hanging drop vapour diffusion method, 0.003 ml of protein solution containing 10 mM MES-NaOH, pH 6.5, with 1 mM dithiothreitol is mixed with 0.001-0.003 ml of reservoir solution containing 0.4-0.8 M sodium malonate, pH 5.6, and 1 mM dithiothreitol, equilibration against reservoir solution at room temperature, 1 week, for enzyme-acarbose complexing the crystals are soaked in 0.5 ml of 0.8 M sodium malonate, pH 5.6, with 5 mg/ml acarbose and with or without and 4-deoxyglucose, for 30 min, X-ray diffraction structure determination and analysis at 1.9-2.5 A resolution
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3 - 11
-
stable
662665
3 - 8
-
loses 40% of the activity at pH 3.0, 80% at pH 8.0
488995
4
-
no activity detected
489000
4 - 10
-
489016
4 - 7.5
pH stability of wild-type and mutant enzymes, overview
685153
5 - 9
-
the recombinant enzyme maintains more than 80% of its activity at a temperature range of 50-80°C and a pH range of 5.0-9.0
704054
5.5 - 9
-
stable at 30°C
718654
5.5 - 10
-
completely stable at 4°C for 18 h
489010
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4
-
quite stable at low temperatures
35 - 40
-
at short incubation time for 15 min at 40°C, the remaining activity of the wild type enzyme is 39.5%, whereas for 30 min incubation, the activity remained is 15.2%. At 35°C for a longer incubation time of 3 h, the remaining activity of the wild type enzyme is 45%
37 - 42
-
D-enzyme, activity decreases rapidly above 37°C and is almost completely lost at 42°C
37 - 80
-
stable at 37°C, retains more than 90% of its maximum activity between 55-80°C, half-life of activity of about 3 h at 80°C
45
-
stable up to
50 - 80
-
the recombinant enzyme maintains more than 80% of its activity at a temperature range of 50-80°C and a pH range of 5.0-9.0
60
-
loses activity when incubated for 10 min
70
-
stable below
87
-
half-life: 506 min
89
-
half-life: 114 min
95
-
half-life: 107 min
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
dithiothreitol decreases thermal stability of the enzyme
-
unstable to freezing, glycerol reduces activity and cannot be used to stabilize the enzyme at freezing temperatures
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, stored in purification buffer, activity is stable for over 6 months
-
-80°C, purified recombinant enzyme, 20 mM sodium phosphate buffer containing 15% glycerol, pH 7.0, no decrease in acivity observed for 1 month
-
0°C, unstable to freezing
-
4°C, purified enzyme in buffer shows little or no loss of activity in 1 month
-
4°C, relatively stable at low temperatures, may be stored for many months in a cold room with relatively little loss of activity
-
4°C, stable for several months
-
4°C, stable in 20 mM bis-Tris-propane buffer, pH 6.5, containing 10% glycerol, no loss of activity over 6 months
-
4°C, stored as a suspension in 3.2 M ammonium sulfate, no significant loss of activity for at least 1 month
-
4°C, very stable over long periods
-
Purification/COMMENTARY
ORGANISM
UNIPROT
LITERATURE
both amylomaltase and D-enzyme
-
DEAE column chromatography and phenyl column chromatography
-
E. coli ML 30, partially
-
HisTrap affinity column chromatography, and gel filtration
-
HisTrap column chromatography
-
HisTrap column chromatography, and gel filtration
-
iminodiacetic acid-Sepharose column chromatography and Superdex 200 gel filtration
native and recombinant enzyme
Ni HiTrap column chromatography and Superdex 75 gel filtration
Ni-NTA column chromatography
-
Ni-NTA column chromatography, and gel filtration
partial
recombinant enzyme
recombinant His-tagged alpaGTase 2.9fold from Escherichia coli strain BL21 (DE3) by nickel affinity chromatography
-
recombinant His-tagged enzyme by nickel affinity chromatography
-
recombinant His-tagged enzyme from Escherichia coli strain BL21(DE3) by heat treatment and nickel affinity chromatography, removal of the His-tag through cleavage with bovine thrombin
recombinant His-tagged enzyme from Escherichia coli strain MC1061 by nickel affinity chromatography
-
recombinant His-tagged TsalphaGT from Escherichia coli strain MC1061 by nickel affinity chromatography to homogeneity
-
recombinant His6-tagged MalQ from Escherichia coli strain BL21 (DE3) by nickel affinity chromatography
recombinant wild-type and mutant enzymes from Escherichia coli by nickel affinity chromatography
Cloned/COMMENTARY
ORGANISM
UNIPROT
LITERATURE
; cloned and sequenced and overexpressed in Escherichia coli
; STA11, both cDNA and gDNA corresponding to the D-enzyme cloned
cDNA clone isolated and expressed in Escherichia coli
chromosomal gene cloned and expressed in Escherichia coli and Corynebacterium glutamicum
-
cloned and expressed in Escherichia coli
-
cloned into pTrc99A plasmid vector and expressed in Escherichia coli JM105
-
DPE2, phylogenetic analysis
-
expressed in Escherichia coli
-
expressed in Escherichia coli BL21 Star (DE3) One Shot cells
expressed in Escherichia coli BL21(DE3) cells
expressed in Escherichia coli MC1061 as a 6*His tagged protein
-
expression in Escherichia coli
expression in Escherichia coli strain BL21
-
expression of His-tagged alpaGTase in Escherichia coli strain BL21 (DE3)
-
expression of His-tagged enzyme
-
expression of His-tagged enzyme in Escherichia coli strain MC1061
-
expression of His-tagged TsalphaGT in Escherichia coli strain MC1061
-
expression of the His-tagged enzyme in Escherichia coli strain BL21(DE3)
expression of wild-type and mutant enzymes in Escherichia coli, sequence comparison
gene cloned an sequenced
-
gene cloned, sequenced and expressed in Escherichia coli
-
gene gtpK cloned, sequenced and overexpressed in Escherichia coli
-
gene MalQ cloned and expressed in Escherichia coli
-
gene malQ, DNA and amino acid sequence determination and analysis, phylogenetic tree, sequence comparisons, expression of the His6-tagged enzyme in Escherichia coli strain BL21 (DE3)
gene malQ, expression in Bacillus subtilis strain NCIMB12378
-
gene treX, cloning from the trehalose biosynthesis gene cluster, expression of the His-tagged enzyme in Escherichia coli
-
genes agtA and agtB, DNA and amino acid sequence determination and analysis, phylogenetic tree, overexpression in Aspergillus niger strain MGG029, subcloning in Escherichia coli
-
genes for amylomaltase are part of the glycogen operon
genes of wild-type and mutant enzymes are coexpressed in Escherichia coli cells with GroELS, tRNA(AGA), and tRNA(AGG)
-
Gtase gene cloned and expressed in Escherichia coli MV1184
-
human glycogen debrancher gene assigned to chromosome 1p21, cloned and expressed in insect cells
-
malQ gene clone in pET expression vector system
-
MalQ gene encodes amylomaltase
-
molecular cloning, sequencing and analysis of cDNA
-
overexpressed in Escherichia coli BL21
-
putative gene identified in the genome
seuence determined
-
STA11, both cDNA and gDNA corresponding to the D-enzyme cloned
-
YPR1184w gene encodes the glycogen debranching enzyme
-
ENGINEERING
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
A406L
-
the mutant shows higher thermostability at 35-40°C, higher intermolecular transglucosylation activity with an upward shift in the optimum temperature and a slight increase in the optimum pH for disproportionation and cyclization reactions compared to the wild type enzyme. The mutant shows higher specific activities for starch transglucosylation (2.1fold) and disproportionation (1.4fold) than those of the wild type
A406V
-
the mutant shows higher thermostability at 50°C, higher intermolecular transglucosylation activity with an upward shift in the optimum temperature and a slight increase in the optimum pH for disproportionation and cyclization reactions compared to the wild type enzyme. The mutant shows higher specific activities for starch transglucosylation (2.8fold) and disproportionation (2.1fold) than those of the wild type
Y172A
-
mutant exhibits lower disproportionation, cyclization, and hydrolysis activities than the wild-type. The kcat/Km of the disproportionation reaction for the Y172A enzyme is 2.8fold lower than that of wild-type. The Y172A enzyme shows a product pattern different from that of wild-type at a long incubation time. The principal large-ring cyclodextrin products of the Y172A mutant are a cycloamylose mixture with a degree of polymerization of 28 or 29
A406L
-
the mutant shows higher thermostability at 35-40°C, higher intermolecular transglucosylation activity with an upward shift in the optimum temperature and a slight increase in the optimum pH for disproportionation and cyclization reactions compared to the wild type enzyme. The mutant shows higher specific activities for starch transglucosylation (2.1fold) and disproportionation (1.4fold) than those of the wild type
-
A406V
-
the mutant shows higher thermostability at 50°C, higher intermolecular transglucosylation activity with an upward shift in the optimum temperature and a slight increase in the optimum pH for disproportionation and cyclization reactions compared to the wild type enzyme. The mutant shows higher specific activities for starch transglucosylation (2.8fold) and disproportionation (2.1fold) than those of the wild type
-
W229H
-
kcat/KM value of transglycosylation activity significantly decreases to about 15% of wild-type, kcat/Km value of hydrolysis activity changes little
D214N
-
the specific activity of the D214N mutant is decreased about 10000fold as compared with that of the wild-type enzyme
E123Q
-
the specific activity of the mutant enzyme toward maltotriose is about 15000fold lower than the specific activity of the wild-type enzyme
E129Q
-
the specific activity of the mutant enzyme is almost the same as that of the wild-type enzyme
D214N
-
the specific activity of the D214N mutant is decreased about 10000fold as compared with that of the wild-type enzyme
-
F251G
mutation results in significantly lower glucose production but increased maltose production from maltopentose substrates, showing an altered substrate-binding affinity
Q256G
mutation results in increased Km for maltotriose and a sharp decrease of the transglycosylation factor for maltose
W258G
mutant shows neither cyclization nor coupling activity, suggesting that residue Trp258 plays an essential role in all catalytic activities including hydrolysis and transglycosylation activities
D293A
site-directed mutagenesis of the active site nucleophile, the mutant shows reduced activity with malto-oligomers compared to the wild-type enzyme
D293N
site-directed mutagenesis of the active site nucleophile, the D293N mutation reduces the pH stability of the enzyme, the mutant shows reduced activity with malto-oligomers compared to the wild-type enzyme
D294S
site-directed mutagenesis, the mutant shows highly reduced kcat and reduced activity with malto-oligomers compared to the wild-type enzyme
D395A
site-directed mutagenesis of the active site transition stabilizer, the mutant shows reduced activity with malto-oligomers compared to the wild-type enzyme
D395N
site-directed mutagenesis of the active site transition stabilizer, the mutant shows reduced activity with malto-oligomers compared to the wild-type enzyme
E340A
site-directed mutagenesis of the active site general acid/base catalyst, the mutant shows reduced activity with malto-oligomers compared to the wild-type enzyme
E340Q
site-directed mutagenesis of the active site general acid/base catalyst, the mutant shows reduced activity with malto-oligomers compared to the wild-type enzyme
E758Q
the mutant shows highly reduced activity compared to the wild-type enzyme
F366L
site-directed mutagenesis, the mutant shows reduced kcat compared and reduced activity with malto-oligomers compared to the wild-type enzyme
additional information
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
analysis
-
investigation of molecular characteristics, microstructures, and physicochemical properties of modified starch gels prepared from partial enzyme treatments of the corn and rice starch pastes. Unlike the native and partially modified normal starches, the native and partially modified waxy starches can not form gels strong enough for textural analysis after 24 h for gel setting. The partially modified normal starches show specific apparent amylose contents and maximum iodine absorption wavelength, as well as the tri-modal molecular weight profiles and flatter side-chain distributions. The partially modified normal starch gels possess fractured surfaces with discontinuous crystalline fibrous assembly, which result in more brittle, rigid, and resilient gels compared with the native gels
biotechnology
-
industrial production of cycloamylase with mutant enzyme Y54G, which shows high cyclization activity and low hydrolytic activity
food industry
medicine
nutrition
synthesis
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