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Information on EC 2.4.1.13 - sucrose synthase and Organism(s) Glycine max and UniProt Accession P13708

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EC Tree
     2 Transferases
         2.4 Glycosyltransferases
             2.4.1 Hexosyltransferases
                2.4.1.13 sucrose synthase
IUBMB Comments
Although UDP is generally considered to be the preferred nucleoside diphosphate for sucrose synthase, numerous studies have shown that ADP serves as an effective acceptor molecule to produce ADP-glucose [3-9]. Sucrose synthase has a dual role in producing both UDP-glucose (necessary for cell wall and glycoprotein biosynthesis) and ADP-glucose (necessary for starch biosynthesis) .
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This record set is specific for:
Glycine max
UNIPROT: P13708
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Word Map
The taxonomic range for the selected organisms is: Glycine max
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
sucrose synthase, sucrose synthetase, susy1, mtsucs1, rsus3, sucrose synthase 1, psnsusy2, susy2, sucrose synthase 2, sucrose synthase 3, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glucosyltransferase, uridine diphosphoglucose-fructose
-
-
-
-
sucrose synthetase
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-
-
-
sucrose-UDP glucosyltransferase
-
-
-
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sucrose-uridine diphosphate glucosyltransferase
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-
-
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Sus
-
-
-
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SuSy
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-
-
-
UDP-glucose-fructose glucosyltransferase
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-
-
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UDP-glucose:D-fructose 2-alpha-D-glucosyltransferase
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-
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uridine diphosphoglucose-fructose glucosyltransferase
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-
-
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REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hexosyl group transfer
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-
-
-
SYSTEMATIC NAME
IUBMB Comments
NDP-glucose:D-fructose 2-alpha-D-glucosyltransferase
Although UDP is generally considered to be the preferred nucleoside diphosphate for sucrose synthase, numerous studies have shown that ADP serves as an effective acceptor molecule to produce ADP-glucose [3-9]. Sucrose synthase has a dual role in producing both UDP-glucose (necessary for cell wall and glycoprotein biosynthesis) and ADP-glucose (necessary for starch biosynthesis) [10].
CAS REGISTRY NUMBER
COMMENTARY hide
9030-05-1
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
ADP + sucrose
ADP-alpha-D-glucose + D-fructose
show the reaction diagram
-
-
-
r
ADP-alpha-D-glucose + D-fructose
ADP + sucrose
show the reaction diagram
-
-
-
r
CDP + sucrose
CDP-alpha-D-glucose + D-fructose
show the reaction diagram
-
-
-
r
CDP-alpha-D-glucose + D-fructose
CDP + sucrose
show the reaction diagram
-
-
-
r
dTDP + sucrose
dTDP-alpha-D-glucose + D-fructose
show the reaction diagram
-
-
-
r
dTDP-alpha-D-glucose + D-fructose
dTDP + sucrose
show the reaction diagram
-
-
-
r
dUDP + sucrose
dUDP-alpha-D-glucose + D-fructose
show the reaction diagram
-
-
-
r
dUDP-alpha-D-glucose + D-fructose
dUDP + sucrose
show the reaction diagram
-
-
-
r
GDP + sucrose
GDP-alpha-D-glucose + D-fructose
show the reaction diagram
-
-
-
r
GDP-alpha-D-glucose + D-fructose
GDP + sucrose
show the reaction diagram
-
-
-
r
NDP + sucrose
NDP-alpha-D-glucose + D-fructose
show the reaction diagram
the reaction is catalyzed at low pH values
-
-
r
NDP-alpha-D-glucose + D-fructose
NDP + sucrose
show the reaction diagram
UDP + sucrose
UDP-alpha-D-glucose + D-fructose
show the reaction diagram
UDP + sucrose
UDP-glucose + D-fructose
show the reaction diagram
-
-
-
?
UDP-alpha-D-glucose + D-fructose
UDP + sucrose
show the reaction diagram
-
-
-
r
UDP-glucose + D-fructose
UDP + sucrose
show the reaction diagram
-
-
-
?
UDPglucose + D-fructose
UDP + sucrose
show the reaction diagram
-
-
-
r
ADP-glucose + D-fructose
ADP + sucrose
show the reaction diagram
-
-
-
-
r
CDP-glucose + D-fructose
CDP + sucrose
show the reaction diagram
-
-
-
-
r
GDP-glucose + D-fructose
GDP + sucrose
show the reaction diagram
-
-
-
-
r
UDP + sucrose
UDP-glucose + D-fructose
show the reaction diagram
UDPglucose + D-fructose
UDP + sucrose
show the reaction diagram
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
NDP + sucrose
NDP-alpha-D-glucose + D-fructose
show the reaction diagram
the reaction is catalyzed at low pH values
-
-
r
NDP-alpha-D-glucose + D-fructose
NDP + sucrose
show the reaction diagram
UDP-glucose + D-fructose
UDP + sucrose
show the reaction diagram
-
-
-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mg2+
13 mM used in assay conditions
Mn2+
-
activation
additional information
-
no activation by K+, Na+, NH4+, Cl-, Br-, F-, NO3-, phosphate, sulfate, borate, acetate, citrate
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
quercetin
the enzyme is tolerant to quercetin up to a concentration of 1.5 mM
AMP
-
not inhibitory
ATP
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sucrose synthesis
fructose
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-
glucose
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imidazole
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Tris
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sucrose cleavage
UDP
-
strong
UDPglucose
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UTP
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synthesis
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
allantoin
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activation, sucrose synthesis
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.13
ADP
at pH 7.5 and 30°C
1.6
ADP-alpha-D-glucose
at pH 7.5 and 30°C
3.7
D-fructose
with UDP-alpha-D-glucose as cosubstrate, at pH 7.5 and 30°C
31.3
sucrose
with UDP as cosubstrate, at pH 7.5 and 30°C
0.005
UDP
at pH 7.5 and 30°C
0.012
UDP-alpha-D-glucose
at pH 7.5 and 30°C
0.13
ADP
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-
0.98 - 5
fructose
16.9 - 40
sucrose
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0.005
UDP
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0.012 - 0.033
UDPglucose
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TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2.07
ADP
at pH 7.5 and 30°C
2.9
ADP-alpha-D-glucose
at pH 7.5 and 30°C
21.5
D-fructose
with UDP-alpha-D-glucose as cosubstrate, at pH 7.5 and 30°C
20
sucrose
with UDP as cosubstrate, at pH 7.5 and 30°C
20
UDP
at pH 7.5 and 30°C
21.5
UDP-alpha-D-glucose
at pH 7.5 and 30°C
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
15.1
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pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6
-
sucrose cleavage
9.5
-
sucrose synthesis
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5 - 8.2
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about 90% of maximal activity at pH 5.0 and about half-maximal activity at pH 8.2, sucrose cleavage
7.5 - 10
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about half-maximal activity at pH 7.5 and about 90% of maximal activity at pH 10.0, sucrose synthesis
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
SUS_SOYBN
805
0
92244
Swiss-Prot
other Location (Reliability: 5)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
380000
-
SDS-PAGE
412000
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gel filtration
90000
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4 * 90000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
tetramer
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4 * 90000, SDS-PAGE
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
S11A
phosphorylation still occurs, but weakly
S11C
phosphorylation still occurs, but weakly
S11D
phosphorylation still occurs, but weakly
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
2-mercaptoethanol stabilizes
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STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
4°C, 20 mM potassium phosphate buffer, pH 7.0, 5 mM 2-mercaptoethanol, 4 weeks stable
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PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Ni-NTA column chromatography
Strep tag affinity chromatography
Strep-Tactin column chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
DNA and amino acid sequence determination and analysis, phylogenetic analysis
expressed in Escherichia coli BL21(DE3) cells
expressed in Escherichia coli BL21-Gold (DE3) cells
expression in Escherichia coli
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
synthesis
a biocatalytic cascade of polyphosphate kinase and sucrose synthase is developed for synthesis of nucleotide-activated derivatives of glucose
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Morell, M.; Copeland, L.
Sucrose synthase of soybean nodules
Plant Physiol.
78
149-154
1985
Glycine max
Manually annotated by BRENDA team
Thummler, F.; Verma, D.P.S.
Nodulin-100 of soybean is the subunit of sucrose synthase regulated by the availability of free heme in nodules
J. Biol. Chem.
262
14730-14736
1987
Glycine max
Manually annotated by BRENDA team
Zhang, X.Q.; Lund, A.A.; Sarath, G.; Cerny, R.L.; Roberts, D.M.; Chollet, R.
Soybean nodule sucrose synthase (nodulin-100): further analysis of its phosphorylation using recombinant and authentic root-nodule enzymes
Arch. Biochem. Biophys.
371
70-82
1999
Glycine max (P13708), Glycine max
Manually annotated by BRENDA team
Abid, G.; Silue, S.; Muhovski, Y.; Jacquemin, J.M.; Toussaint, A.; Baudoin, J.P.
Role of myo-inositol phosphate synthase and sucrose synthase genes in plant seed development
Gene
439
1-10
2009
Arabidopsis thaliana (F4K5W8), Arabidopsis thaliana (P49040), Arabidopsis thaliana (Q00917), Citrus unshiu (Q9SLY2), Citrus x paradisi, Coffea arabica (Q0E7D4), Daucus carota (O49845), Eucalyptus grandis (Q00P15), Eucalyptus grandis (Q00P16), Glycine max (P13708), Glycine max, Gossypium hirsutum (Q9XGB7), Gossypium hirsutum, Oryza sativa (P31924), Pisum sativum (O24301), Pisum sativum (O81610), Pisum sativum (Q9AVR8), Pisum sativum (Q9T0M9), Solanum lycopersicum (P49037), Solanum tuberosum (Q84T18), Vicia faba (P31926), Zea mays
Manually annotated by BRENDA team
Pei, J.; Sun, Q.; Gu, N.; Zhao, L.; Fang, X.; Tang, F.; Cao, F.
Production of isoorientin and isovitexin from luteolin and apigenin using coupled catalysis of glycosyltransferase and sucrose synthase
Appl. Biochem. Biotechnol.
190
601-615
2020
Glycine max (P13708), Glycine max
Manually annotated by BRENDA team
Schmoelzer, K.; Gutmann, A.; Diricks, M.; Desmet, T.; Nidetzky, B.
Sucrose synthase A unique glycosyltransferase for biocatalytic glycosylation process development
Biotechnol. Adv.
34
88-111
2016
Anabaena sp., Arabidopsis thaliana, Beta vulgaris, Vicia faba, Helianthus tuberosus, Hordeum vulgare, Ipomoea batatas, Manihot esculenta, Nitrosomonas europaea, Oryza sativa, Vigna radiata, Pisum sativum, Prunus persica, Pyrus pyrifolia, Saccharum sp., Solanum tuberosum, Zea mays, Thermosynechococcus vestitus, Acidithiobacillus caldus, Solanum chmielewskii, Glycine max (P13708)
Manually annotated by BRENDA team
Gutmann, A.; Lepak, A.; Diricks, M.; Desmet, T.; Nidetzky, B.
Glycosyltransferase cascades for natural product glycosylation Use of plant instead of bacterial sucrose synthases improves the UDP-glucose recycling from sucrose and UDP
Biotechnol. J.
12
1600557
2017
Acidithiobacillus caldus (A0A059ZV61), Acidithiobacillus caldus, Glycine max (P13708), Glycine max, Acidithiobacillus caldus ATCC 51756 (A0A059ZV61)
Manually annotated by BRENDA team
Pei, J.; Chen, A.; Zhao, L.; Cao, F.; Li, X.; Xiao, W.
Synergistic catalysis of glycosyltransferase and sucrose synthase to produce isoquercitrin through glycosylation of quercetin
Chem. Nat. Compd.
55
453-457
2019
Glycine max (P13708)
-
Manually annotated by BRENDA team
Kulmer, S.; Gutmann, A.; Lemmerer, M.; Nidetzky, B.
Biocatalytic cascade of polyphosphate kinase and sucrose synthase for synthesis of nucleotide-activated derivatives of glucose
Adv. Synth. Catal.
359
292-301
2017
Acidithiobacillus caldus (A0A059ZV61), Glycine max (P13708), Acidithiobacillus caldus ATCC 51756 (A0A059ZV61)
-
Manually annotated by BRENDA team