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Information on EC 2.3.1.37 - 5-aminolevulinate synthase and Organism(s) Homo sapiens and UniProt Accession P13196

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     2 Transferases
         2.3 Acyltransferases
             2.3.1 Transferring groups other than aminoacyl groups
                2.3.1.37 5-aminolevulinate synthase
IUBMB Comments
A pyridoxal-phosphate protein. The enzyme in erythrocytes is genetically distinct from that in other tissues.
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This record set is specific for:
Homo sapiens
UNIPROT: P13196
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Word Map
The taxonomic range for the selected organisms is: Homo sapiens
The enzyme appears in selected viruses and cellular organisms
Synonyms
alas2, ala synthase, 5-aminolevulinate synthase, ala-s, delta-aminolevulinate synthase, delta-aminolevulinic acid synthase, delta-aminolevulinic acid synthetase, 5-aminolevulinic acid synthase, aminolevulinate synthase, delta-aminolevulinate synthetase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5-aminolevulinate synthase
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-
5-aminolevulinate synthetase
-
-
-
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5-aminolevulinic acid synthetase
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-
-
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ALA synthase
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-
-
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ALA synthetase
-
-
-
-
ALA-S
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ALAS2
alpha-aminolevulinic acid synthase
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-
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aminolevulinate synthase
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-
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aminolevulinate synthetase
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-
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aminolevulinic acid synthase
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-
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aminolevulinic acid synthase 2
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aminolevulinic acid synthetase
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-
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aminolevulinic synthetase
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-
-
-
delta-aminolevulinate synthase
delta-aminolevulinate synthetase
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-
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delta-aminolevulinic acid synthase
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-
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delta-aminolevulinic acid synthase 2
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delta-aminolevulinic acid synthetase
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delta-aminolevulinic synthetase
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erythroid-specific 5-aminolevulinate synthase
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sigma-aminolevulinate synthase
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synthase, aminolevulinate
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-
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synthetase, aminolevulinate
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-
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-
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2
show the reaction diagram
mechanism
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
condensation
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-
Acyl group transfer
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-
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-
SYSTEMATIC NAME
IUBMB Comments
succinyl-CoA:glycine C-succinyltransferase (decarboxylating)
A pyridoxal-phosphate protein. The enzyme in erythrocytes is genetically distinct from that in other tissues.
CAS REGISTRY NUMBER
COMMENTARY hide
9037-14-3
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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
acetyl-CoA + glycine
?
show the reaction diagram
-
at 2% the rate of the reaction with succinyl-CoA
-
-
?
alpha-glutamyl-CoA + glycine
6-amino-5-oxohexanoate + CoA + CO2
show the reaction diagram
-
at 9% the rate of the reaction with succinyl-CoA
-
-
?
succinyl-CoA + glycine
5-aminolevulinate + CoA + CO2
show the reaction diagram
succinyl-CoA-monomethyl ester + glycine
5-aminolevulinic acid methyl ester + CoA + CO2
show the reaction diagram
-
at 80% the rate of the reaction with succinyl-CoA
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-
?
additional information
?
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-
enzyme deficiency causes X-linked sideroblastic anemia
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-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
succinyl-CoA + glycine
5-aminolevulinate + CoA + CO2
show the reaction diagram
additional information
?
-
-
enzyme deficiency causes X-linked sideroblastic anemia
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-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
pyridoxal 5'-phosphate
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Iron
-
regulation of erythroid-specific isoform ALAS-2 via 5'-iron responsive element, i.e. IRE
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1,1-Dimethylhydrazine
about 75% residual activity at 0.01 mM
2-oxoglutarate
-
-
Aminomethylphosphonate
-
-
ferroheme
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-
hemin
hemoglobin
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-
-
isoniazid
about 25% residual activity at 0.01 mM. Isoniazid directly inhibits the enzyme, noncompetitively or uncompetitively. about 0.4 mM pyridoxal 5'-phosphate and PMP reduce the effect of isoniazid on isoform ALAS2 inhibition
metalloporphyrins
-
containing Co2+, Zn2+ or Mg2+
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myoglobin
-
-
-
protoheme
-
feed-back inhibition, non-specific isoform ALAS-1
Pyrazinamide
about 85% residual activity at 0.01 mM
pyruvate
-
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
ClpX
-
the mitochondrial AAA+ unfoldase ClpX participates in both heme-dependent degradation of the enzyme and its activation
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KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
7.5 - 13.5
glycine
0.0357 - 52.4
succinyl-CoA
additional information
additional information
-
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0012
isoniazid
apparent value, pH and temperature not specified in the publication
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
various tissues, overview
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7.4
assay at
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
assay at
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
isoform ALAS1
Uniprot
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
sodium butyrate treatment activates ALAS2 gene transcription
Manually annotated by BRENDA team
sodium butyrate treatment activates ALAS2 gene transcription
Manually annotated by BRENDA team
-
rapid stimulation of ALA-s mRNA by ACTH which acts through cyclic AMP
Manually annotated by BRENDA team
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
additional information
-
synthesized in microsomes and then migrates to the mitochondria
-
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
vertebrate genomes encode two highly conserved, but differentially expressed, ALAS genes, a housekeeping gene (ALAS1)5,6 and an erythroid-specific gene (ALAS2)
malfunction
metabolism
the enzyme catalyzes the first and rate-limiting step of heme formation
physiological function
additional information
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
HEM1_HUMAN
640
0
70581
Swiss-Prot
Mitochondrion (Reliability: 3)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
52000
x * 54000, recombinant wild-type enzyme, SDS-PAGE, x * 52000, recombinant mutant F557X, SDS-PAGE
54000
x * 54000, recombinant wild-type enzyme, SDS-PAGE, x * 52000, recombinant mutant F557X, SDS-PAGE
additional information
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
homodimer
tertiary structures of wild-type and mutant enzymes, overview
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
proteolytic modification
-
first 49 amino acids of enzyme pre-protein are mitochondrial targeting sequence
ubiquitinylation
-
ALAS2 appears to be ubiquitinated as rapidly as at is produced
additional information
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
F557X
site-directed mutagenesis, a ALAS2 exon 11, c.1670-1671TC>GA mutation
M567I
-
mutant shows 25% of wild-type activity, while its half-life is longer than that of wild-type
Q548X
S568G
-
mutant shows decreased catalytic activity in vitro (20% compared to wild-type), but a higher half-life compared to those of wild-type ALAS2
V562A
-
mutant shows a higher catalytic activity in vitro, but a shorter half-life in vivo compared to those of wild-type ALAS2
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
45
t1/2 of the wild-type is 11.7 min, and t1/2 of mutant enzymes are between 3.8 and 12.8 min
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
short half-life
-
OXIDATION STABILITY
ORGANISM
UNIPROT
LITERATURE
ALAS2 is broken down under normoxic conditions by the proteasome
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671812
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
nickel affinity chromatography column chromatography
recombinant MBP-fusion wild-type and mutant enzymes 29-114fold by amylose affinity chromatography and gel filtration
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21(DE3) cells
expressed in eukaryotic cells
-
gene ALAS2, expression of N-terminally His-tagged wild-type enzyme, deletion mutants delAT and delAGTG, and mutant Q548X in Escherichia coli strain BL21(DE3), transient expression of the wild-type enzyme in HeLa cells
liver and erythroid enzyme
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recombinant expression of MBP-fusion wild-type and mutant enzymes
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
analysis of the 5' regulatory region of 5-aminolevulinate synthase gene in variegate porphyria patients heterozygous for the causative R59W mutation in the protoporphyrinogen oxidase gene. In the presence of estrogen and ERalpha, the wild-type -853C/-1253T allele induces a 47% increase in transcription, while the -853T/-1253A double mutant allele showed a 35% increase in transcription. The highest induction is observed for the mutant -853T/1253T allele generating an increase of 66%
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elevated mRNA and protein levels of isoform ALAS2 are observed among patients with erythropoietic protoporphyria. Iron deprivation increases the amount of isoform ALAS2 mRNA
HIF1R knockdown by RNA interference decreased the level of ALAS2 expression. In silico analysis reveal three potential hypoxia-response elements (HREs) that are located 611, 621, and 741 bp downstream of the ALAS2 gene
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increased expression of erythroid specific 5-aminolevulinate synthase ALAS2 and gamma-globin mRNAs after 48 h of hypoxia. Exogenous TGF-beta1 induces hemoglobinization and the expression of ALAS2 mRNA in YN-1-0-A cells, but not of c-globin and mitoferrin mRNAs. A specific inhibitor of intracellular TGF-b signaling markedly reduces the degree of the hypoxia-mediated increase in the expression of ALAS2 mRNA in YN-1-0-A cells
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the presence of low-activity mitochondrial AAA+ unfoldase CLPX increases the posttranslational stability of the enzyme, causing increased protein level
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the relative expression of ALAS1 mRNA, the first and rate-limiting enzyme for heme biosynthesis under normal physiological conditions, is significantly reduced by nearly 90% in patients with Alzheimer's disease compared to control. The relative expression of porphobilinogen deaminase mRNA, the third enzyme in the heme synthesis pathway and a secondary rate-limiting enzyme in heme biosynthesis, is also significantly reduced by nearly 60% in brain of patients with Alzheimer's disease and significantly related to apolipoprotein E genotype. The relative expression of aminolevulinate dehydratase mRNA, the second and a non-rate-limiting enzyme for heme biosynthesis, is unchanged between the two groups
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under hypoxic conditions, significantly increased ALAS2 mRNA and protein levels are detected in K562 cells and erythroid induction cultures of CD34+ hematopoietic stem/progenitor cells
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APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
medicine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Bishop, D.F.; Henderson, A.S.; Astrin, K.H.
Human delta-aminolevulinate synthase: assignment of the housekeeping gene to 3p21 and the erythroid-specific gene to the X chromosome
Genomics
7
207-214
1990
Homo sapiens
Manually annotated by BRENDA team
Jordan, P.M.; Shemin, D.
delta-Aminolevulinic acid synthetase
The Enzymes, 3rd Ed. (Boyer, P. D. , ed. )
7
339-356
1972
Saccharomyces cerevisiae, Cavia porcellus, Gallus gallus, Oryctolagus cuniculus, Homo sapiens, no activity in Chromatium sp., Propionibacterium freudenreichii subsp. shermanii, Rattus norvegicus, Cereibacter sphaeroides, Rhodospirillum rubrum, Spinacia oleracea, Novispirillum itersonii
-
Manually annotated by BRENDA team
Ferreira, G.C.; Gong, J.
5-Aminolevulinate synthase and the first step of heme biosynthesis
J. Bioenerg. Biomembr.
27
151-159
1995
Agrobacterium tumefaciens, Aspergillus nidulans, Bradyrhizobium japonicum, Saccharomyces cerevisiae, Gallus gallus, Euglena gracilis, Homo sapiens, Paracoccus denitrificans, Mus musculus, Rattus norvegicus, Sinorhizobium meliloti, Rhodobacter capsulatus, Cereibacter sphaeroides
Manually annotated by BRENDA team
Dailey, H.A.; Dailey, T.A.
Expression and purification of mammalian 5-aminolevulinate synthase
Methods Enzymol.
281
336-340
1997
Gallus gallus, Homo sapiens, Mus musculus, Rattus norvegicus
Manually annotated by BRENDA team
Dailey, T.A.; Woodruff, J.H.; Dailey, H.A.
Examination of mitochondrial protein targeting of haem synthetic enzymes: in vivo identification of three functional haem-responsive motifs in 5-aminolaevulinate synthase
Biochem. J.
386
381-386
2005
Homo sapiens (P13196)
Manually annotated by BRENDA team
Shoolingin-Jordan, P.M.; Al-Daihan, S.; Alexeev, D.; Baxter, R.L.; Bottomley, S.S.; Kahari, I.D.; Roy, I.; Sarwar, M.; Sawyer, L.; Wang, S.F.
5-Aminolevulinic acid synthase: mechanism, mutations and medicine
Biochim. Biophys. Acta
1647
361-366
2003
Homo sapiens, Cereibacter sphaeroides
Manually annotated by BRENDA team
Cox, T.C.; Sadlon, T.J.; Schwarz, Q.P.; Matthews, C.S.; Wise, P.D.; Cox, L.L.; Bottomley, S.S.; May, B.K.
The major splice variant of human 5-aminolevulinate synthase-2 contributes significantly to erythroid heme biosynthesis
Int. J. Biochem. Cell Biol.
36
281-295
2004
Homo sapiens
Manually annotated by BRENDA team
Guberman, A.S.; Scassa, M.E.; Canepa, E.T.
Repression of 5-aminolevulinate synthase gene by the potent tumor promoter, TPA, involves multiple signal transduction pathways
Arch. Biochem. Biophys.
436
285-296
2005
Homo sapiens
Manually annotated by BRENDA team
Abu-Farha, M.; Niles, J.; Willmore, W.G.
Erythroid-specific 5-aminolevulinate synthase protein is stabilized by low oxygen and proteasomal inhibition
Biochem. Cell Biol.
83
620-630
2005
Homo sapiens
Manually annotated by BRENDA team
Han, L.; Zhong, Y.; Huang, B.; Han, L.; Pan, L.; Xu, X.; Wang, X.; Huang, B.; Lu, J.
Sodium butyrate activates erythroid-specific 5-aminolevulinate synthase gene through Sp1 elements at its promoter
Blood Cells Mol. Dis.
41
148-153
2008
Homo sapiens (P22557)
Manually annotated by BRENDA team
Martini, C.N.; Romero, D.G.; Yanes, L.L.; Vila, M.d.e.l..C.
Induction of 5-aminolevulinate synthase by activators of steroid biosynthesis
Life Sci.
81
19-25
2007
Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Huang, Q.; Li, J.; Feng, W.; Xu, Y.; Huang, Z.; Lv, S.; Zhou, H.; Gao, L.
Erythroid 5-aminolevulinate synthase mediates the upregulation of membrane band 3 protein expression by iron
Cell Biochem. Funct.
28
122-125
2010
Homo sapiens (P22557)
Manually annotated by BRENDA team
du Plessis, N.; Kimberg, M.; Zaahl, M.G.; Sadie, A.; Venter, M.; van der Merwe, L.; Louw, A.; Warnich, L.
Functional analysis of the 5 regulatory region of the 5-aminolevulinate synthase (ALAS1) gene in response to estrogen
Cell. Mol. Biol.
55
20-30
2009
Homo sapiens
Manually annotated by BRENDA team
Kaneko, K.; Furuyama, K.; Aburatani, H.; Shibahara, S.
Hypoxia induces erythroid-specific 5-aminolevulinate synthase expression in human erythroid cells through transforming growth factor-beta signaling
FEBS J.
276
1370-1382
2009
Homo sapiens
Manually annotated by BRENDA team
Dwyer, B.E.; Smith, M.A.; Richardson, S.L.; Perry, G.; Zhu, X.
Down-regulation of aminolevulinate synthase, the rate-limiting enzyme for heme biosynthesis in Alzheimers disease
Neurosci. Lett.
460
180-184
2009
Homo sapiens
Manually annotated by BRENDA team
Zhang, F.L.; Shen, G.M.; Liu, X.L.; Wang, F.; Zhao, H.L.; Yu, J.; Zhang, J.W.
Hypoxic induction of human erythroid-specific sigma-aminolevulinate synthase mediated by hypoxia-inducible factor 1
Biochemistry
50
1194-1202
2011
Homo sapiens
Manually annotated by BRENDA team
Kadirvel, S.; Furuyama, K.; Harigae, H.; Kaneko, K.; Tamai, Y.; Ishida, Y.; Shibahara, S.
The carboxyl-terminal region of erythroid-specific 5-aminolevulinate synthase acts as an intrinsic modifier for its catalytic activity and protein stability
Exp. Hematol.
40
477-486.e1
2012
Homo sapiens
Manually annotated by BRENDA team
Fratz, E.J.; Clayton, J.; Hunter, G.A.; Ducamp, S.; Breydo, L.; Uversky, V.N.; Deybach, J.C.; Gouya, L.; Puy, H.; Ferreira, G.C.
Human erythroid 5-aminolevulinate synthase mutations associated with X-linked protoporphyria disrupt the conformational equilibrium and enhance product release
Biochemistry
54
5617-5631
2015
Homo sapiens (P22557), Homo sapiens
Manually annotated by BRENDA team
Bishop, D.F.; Tchaikovskii, V.; Nazarenko, I.; Desnick, R.J.
Molecular expression and characterization of erythroid-specific 5-aminolevulinate synthase gain-of-function mutations causing X-linked protoporphyria
Mol. Med.
19
18-25
2013
Homo sapiens (P22557)
Manually annotated by BRENDA team
Fratz-Berilla, E.J.; Breydo, L.; Gouya, L.; Puy, H.; Uversky, V.N.; Ferreira, G.C.
Isoniazid inhibits human erythroid 5-aminolevulinate synthase Molecular mechanism and tolerance study with four X-linked protoporphyria patients
Biochim. Biophys. Acta
1863
428-439
2017
Homo sapiens (P22557), Homo sapiens
Manually annotated by BRENDA team
Barman-Aksoezen, J.; Halloy, F.; Iyer, P.S.; Schuemperli, D.; Minder, A.E.; Hall, J.; Minder, E.I.; Schneider-Yin, X.
Delta-aminolevulinic acid synthase 2 expression in combination with iron as modifiers of disease severity in erythropoietic protoporphyria
Mol. Genet. Metab.
128
304-308
2019
Homo sapiens (P22557), Homo sapiens
Manually annotated by BRENDA team
Yien, Y.Y.; Ducamp, S.; van der Vorm, L.N.; Kardon, J.R.; Manceau, H.; Kannengiesser, C.; Bergonia, H.A.; Kafina, M.D.; Karim, Z.; Gouya, L.; Baker, T.A.; Puy, H.; Phillips, J.D.; Nicolas, G.; Paw, B.H.
Mutation in human CLPX elevates levels of delta-aminolevulinate synthase and protoporphyrin IX to promote erythropoietic protoporphyria
Proc. Natl. Acad. Sci. USA
114
E8045-E8052
2017
Homo sapiens
Manually annotated by BRENDA team