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Information on EC 1.14.11.4 - procollagen-lysine 5-dioxygenase and Organism(s) Mus musculus and UniProt Accession Q9R0E2

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IUBMB Comments
Requires Fe2+ and ascorbate.
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This record set is specific for:
Mus musculus
UNIPROT: Q9R0E2
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Word Map
The taxonomic range for the selected organisms is: Mus musculus
The enzyme appears in selected viruses and cellular organisms
Synonyms
jmjd6, plod2, lysyl hydroxylase, plod1, plod3, lysyl hydroxylase 2, lysyl hydroxylase 3, lysyl hydroxylase 1, procollagen-lysine 2-oxoglutarate 5-dioxygenase 2, procollagen-lysine, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
lysyl-hydroxylase 1
-
collagen lysine hydroxylase
-
-
-
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lysine hydroxylase
-
-
-
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lysine, 2-oxoglutarate 5-dioxygenase
-
-
-
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lysine-2-oxoglutarate dioxygenase
-
-
-
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lysyl hydroxylase
-
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lysyl hydroxylase 2
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lysyl hydroxylase 3
Lysyl hydroxylase-2b
-
-
lysylprotocollagen dioxygenase
-
-
-
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oxygenase, protocollagen lysine, di-
-
-
-
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peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase
-
-
-
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peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase
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-
-
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PLOD2iso1
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PLOD2iso2
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procollagen-lysine, 2-oxoglutarate 5-dioxygenase
-
protocollagen lysine hydroxylase
-
-
-
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protocollagen lysyl hydroxylase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
decarboxylation
-
-
-
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redox reaction
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-
-
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hydroxylation
PATHWAY SOURCE
PATHWAYS
-
-
SYSTEMATIC NAME
IUBMB Comments
L-lysine-[procollagen],2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating)
Requires Fe2+ and ascorbate.
CAS REGISTRY NUMBER
COMMENTARY hide
9059-25-0
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
[procollagen]-L-lysine + 2-oxoglutarate + O2
[procollagen]-(2S,5R)-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
adiponectin-L-lysine + 2-oxoglutarate + O2
adiponectin-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
-
-
-
?
collagen + 2-oxoglutarate + O2
5-hydroxylysyl-collagen + succinate + CO2
show the reaction diagram
-
-
-
-
?
L-lysine-[collagen] + 2-oxoglutarate + O2
5-hydroxy-L-lysine-[collagen] + succinate + CO2
show the reaction diagram
-
-
-
-
?
mannan-binding lectin-A-L-lysine + 2-oxoglutarate + O2
mannan-binding lectin-A-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
procollagen L-lysine + 2-oxoglutarate + O2
procollagen 5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
[procollagen]-L-lysine + 2-oxoglutarate + O2
[procollagen]-(2S,5R)-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
[procollagen]-L-lysine + 2-oxoglutarate + O2
[procollagen]-(2S,5R)-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
adiponectin-L-lysine + 2-oxoglutarate + O2
adiponectin-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
-
-
-
?
L-lysine-[collagen] + 2-oxoglutarate + O2
5-hydroxy-L-lysine-[collagen] + succinate + CO2
show the reaction diagram
-
-
-
-
?
mannan-binding lectin-A-L-lysine + 2-oxoglutarate + O2
mannan-binding lectin-A-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
C-terminally FLAG-tagged rat MBL-A
-
-
?
procollagen L-lysine + 2-oxoglutarate + O2
procollagen 5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
-
isozyme LH2b directs the collagen cross-linking pathways, lysine hydroxylation as post-translational modification critical for collagen cross-linking and glycosylation, isozyme LH2 modulates the cross-linking pattern
-
-
?
[procollagen]-L-lysine + 2-oxoglutarate + O2
[procollagen]-(2S,5R)-5-hydroxy-L-lysine + succinate + CO2
show the reaction diagram
additional information
?
-
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
ascorbate
-
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Fe2+
-
-
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
dipyridyl
a non-specific hydroxylase inhibitor
minoxidil
specific inhibition of lysyl hydroxylases
SC65
directly interacts with lysyl-hydroxylase 1, LH1
-
dipyridyl
a non-specific hydroxylase inhibitor
minoxidil
specific inhibition of lysyl hydroxylases
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
FKBP65
FKBP65 interacts with LH2 through its peptidyl prolyl isomerase (PPIase) domains, FKBP65 forms a complex with LH2. Reconstitution with wild-type FKBP65 increases the enzyme activity by 7fold
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SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
skin and embryonic
Manually annotated by BRENDA team
primary calvarial
Manually annotated by BRENDA team
lysyl hydroxylases are expressed in white-adipose tissue of ob/ob mice, wherein LH3 levels are increased compared with C57/BL controls. Expression levels of mRNAs corresponding to LH1 (Plod1) and LH3 (Plod3) are both altered in ob/ob mice, in the same direction as the changes in serum levels of adiponectin and the HMW isoforms
Manually annotated by BRENDA team
p21-deficient (KC) and -replete (K) murine lung adenocarcinoma cells, increased LH2 enzyme activity
Manually annotated by BRENDA team
-
-
Manually annotated by BRENDA team
4 lung adenocarcinoma cell lines (KC1–KC4) from lung tumors in KC mice and 2 lung adenocarcinoma cell lines (K1 and K2) from Cdkn1aWT K-rasLA1 mice. Expression levels of the third gene of interest, LH2, are 10-30 times higher in the highly metastatic KC cells and include both LH2 isoforms, full-length (LH2b) and spliced at exon 13 (LH2a)
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
malfunction
metabolism
physiological function
malfunction
metabolism
essential roles of insulin, AMPK signaling and lysyl and prolyl hydroxylases in the biosynthesis and multimerization of adiponectin, pathway regulation, detailed overview
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PLOD1_MOUSE
728
0
83595
Swiss-Prot
Secretory Pathway (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
86000
89000
-
LH2, SDS-PAGE
97000
-
SDS-PAGE, V5-tagged LH2b
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D669A
additional information
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
recombinant V5/His-tagged LH3 protein from HEK-293 cells by nickel affinity chromatography, dialysis, and ultrafiltration
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
gene Plod1, quantitative RT-PCR enzyme expression analysis
transient transfection of HA-tagged LH1 in 714 mouse embryonic fibroblasts
expression of active LH2b and of antisense construct in MC3T3-E1 cells, the latter suppresses the endogenous enzyme
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gene Plod3, expression of recombinant V5/His-tagged LH3 protein in HEK-293 cells
gene Plod3, quantitative RT-PCR enzyme expression analysis
genes Plod2a and Plod2b, quantitative RT-PCR enzyme expression analysis
quantitative LH gene expression analysis by realtime PCR, genes LH2a and LH2b DNA and amino acid sequence analysis using RT-PCR
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
gene expressions of isozymes LH1, LH2b and LOXL2 are significantly upregulated by 1,25(OH)2D3, the active form of vitamin D
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Pornprasertsuk, S.; Duarte, W.R.; Mochida, Y.; Yamauchi, M.
Lysyl hydroxylase-2b directs collagen cross-linking pathways in MC3T3-E1 cells
J. Bone Miner. Res.
19
1349-1355
2004
Mus musculus
Manually annotated by BRENDA team
Pornprasertsuk, S.; Duarte, W.R.; Mochida, Y.; Yamauchi, M.
Overexpression of lysyl hydroxylase-2b leads to defective collagen fibrillogenesis and matrix mineralization
J. Bone Miner. Res.
20
81-87
2005
Mus musculus
Manually annotated by BRENDA team
Ruotsalainen, H.; Sipilae, L.; Vapola, M.; Sormunen, R.; Salo, A.M.; Uitto, L.; Mercer, D.K.; Robins, S.P.; Risteli, M.; Aszodi, A.; Faessler, R.; Myllylae, R.
Glycosylation catalyzed by lysyl hydroxylase 3 is essential for basement membranes
J. Cell Sci.
119
625-635
2006
Mus musculus
Manually annotated by BRENDA team
Salo, A.M.; Wang, C.; Sipilae, L.; Sormunen, R.; Vapola, M.; Kervinen, P.; Ruotsalainen, H.; Heikkinen, J.; Myllylae, R.
Lysyl hydroxylase 3 (LH3) modifies proteins in the extracellular space, a novel mechanism for matrix remodeling
J. Cell. Physiol.
207
644-653
2006
Mus musculus
Manually annotated by BRENDA team
Salo, A.M.; Sipilae, L.; Sormunen, R.; Ruotsalainen, H.; Vainio, S.; Myllylae, R.
The lysyl hydroxylase isoforms are widely expressed during mouse embryogenesis, but obtain tissue- and cell-specific patterns in the adult
Matrix Biol.
25
475-483
2006
Mus musculus
Manually annotated by BRENDA team
Takaluoma, K.; Hyry, M.; Lantto, J.; Sormunen, R.; Bank, R.A.; Kivirikko, K.I.; Myllyharju, J.; Soininen, R.
Tissue-specific changes in the hydroxylysine content and cross-links of collagens and alterations in fibril morphology in lysyl hydroxylase 1 knock-out mice
J. Biol. Chem.
282
6588-6596
2007
Mus musculus (Q9R0E2)
Manually annotated by BRENDA team
Nagaoka, H.; Mochida, Y.; Atsawasuwan, P.; Kaku, M.; Kondoh, T.; Yamauchi, M.
1,25(OH)2D3 regulates collagen quality in an osteoblastic cell culture system
Biochem. Biophys. Res. Commun.
377
674-678
2008
Mus musculus
Manually annotated by BRENDA team
Sricholpech, M.; Perdivara, I.; Nagaoka, H.; Yokoyama, M.; Tomer, K.B.; Yamauchi, M.
Lysyl hydroxylase 3 glucosylates galactosylhydroxylysine residues in type I collagen in osteoblast culture
J. Biol. Chem.
286
8846-8856
2011
Mus musculus (Q9R0E1), Mus musculus, Mus musculus CRL-2593 (Q9R0E1)
Manually annotated by BRENDA team
Ruotsalainen, H.; Risteli, M.; Wang, C.; Wang, Y.; Karppinen, M.; Bergmann, U.; Kvist, A.P.; Pospiech, H.; Herzig, K.H.; Myllylae, R.
The activities of lysyl hydroxylase 3 (LH3) regulate the amount and oligomerization status of adiponectin
PLoS ONE
7
e50045
2012
Mus musculus, Mus musculus C57BL/6
Manually annotated by BRENDA team
Chen, Y.; Terajima, M.; Yang, Y.; Sun, L.; Ahn, Y.H.; Pankova, D.; Puperi, D.S.; Watanabe, T.; Kim, M.P.; Blackmon, S.H.; Rodriguez, J.; Liu, H.; Behrens, C.; Wistuba, I.I.; Minelli, R.; Scott, K.L.; Sanchez-Adams, J.; Guilak, F.; Pati, D.; Thilaganathan, N.; Burns, A.R.; Creighton, C.J.; Martinez, E.D.; Zal, T.; Allen, K.; Yamauchi, M.; Kurie, J.M.
Lysyl hydroxylase 2 induces a collagen cross-link switch in tumor stroma
J. Clin. Invest.
125
1147-1162
2015
Homo sapiens (O00469), Homo sapiens, Mus musculus (Q9R0B9), Mus musculus
Manually annotated by BRENDA team
Zhang, L.; Li, M.M.; Corcoran, M.; Zhang, S.; Cooper, G.J.
Essential roles of insulin, AMPK signaling and lysyl and prolyl hydroxylases in the biosynthesis and multimerization of adiponectin
Mol. Cell. Endocrinol.
399
164-177
2015
Mus musculus (Q9R0B9), Mus musculus (Q9R0E1), Mus musculus (Q9R0E2)
Manually annotated by BRENDA team
Heard, M.E.; Besio, R.; Weis, M.; Rai, J.; Hudson, D.M.; Dimori, M.; Zimmerman, S.M.; Kamykowski, J.A.; Hogue, W.R.; Swain, F.L.; Burdine, M.S.; Mackintosh, S.G.; Tackett, A.J.; Suva, L.J.; Eyre, D.R.; Morello, R.
Sc65-null mice provide evidence for a novel endoplasmic reticulum complex regulating collagen lysyl hydroxylation
PLoS Genet.
12
e1006002
2016
Mus musculus (Q9R0E2), Mus musculus, Mus musculus 714 (Q9R0E2)
Manually annotated by BRENDA team
Risteli, M.; Ruotsalainen, H.; Bergmann, U.; Venkatraman Girija, U.; Wallis, R.; Myllylae, R.
Lysyl hydroxylase 3 modifies lysine residues to facilitate oligomerization of mannan-binding lectin
PLoS ONE
9
e113498
2014
Mus musculus (Q9R0E1), Mus musculus, Mus musculus C57BL/6 (Q9R0E1)
Manually annotated by BRENDA team
Chen, Y.; Terajima, M.; Banerjee, P.; Guo, H.; Liu, X.; Yu, J.; Yamauchi, M.; Kurie, J.M.
FKBP65-dependent peptidyl-prolyl isomerase activity potentiates the lysyl hydroxylase 2-driven collagen cross-link switch
Sci. Rep.
7
46021
2017
Mus musculus (Q9R0B9), Mus musculus
Manually annotated by BRENDA team