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Information on EC 1.11.1.21 - catalase-peroxidase and Organism(s) Escherichia coli and UniProt Accession B1IVD5

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EC Tree
     1 Oxidoreductases
         1.11 Acting on a peroxide as acceptor
             1.11.1 Peroxidases
                1.11.1.21 catalase-peroxidase
IUBMB Comments
Differs from EC 1.11.1.7, peroxidase in having a relatively high catalase (EC 1.11.1.6) activity with H2O2 as donor, releasing O2; both activities use the same heme active site. In Mycobacterium tuberculosis it is responsible for activation of the commonly used antitubercular drug, isoniazid.
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Escherichia coli
UNIPROT: B1IVD5
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Word Map
The taxonomic range for the selected organisms is: Escherichia coli
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria, Archaea
Reaction Schemes
2
=
+
2
2
=
+
2
Synonyms
catalase-peroxidase, catalase peroxidase, catalase/peroxidase, hydroperoxidase i, katg2, katx2, katg1, fvcp02, fvcp01, afkatg, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
catalase/peroxidase
-
-
FeSOD A
-
-
hydroperoxidase I
-
-
SYSTEMATIC NAME
IUBMB Comments
donor:hydrogen-peroxide oxidoreductase
Differs from EC 1.11.1.7, peroxidase in having a relatively high catalase (EC 1.11.1.6) activity with H2O2 as donor, releasing O2; both activities use the same heme active site. In Mycobacterium tuberculosis it is responsible for activation of the commonly used antitubercular drug, isoniazid.
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
3-methoxyphenol + H2O2
? + H2O
show the reaction diagram
about 90% conversion
products are oligomers of different weight, i.g. of 27 monomer units and of 23 monomer units
-
?
aniline + H2O2
? + H2O
show the reaction diagram
about 25% conversion
-
-
?
catechol + H2O2
? + H2O
show the reaction diagram
about 90% conversion
products are oligomers of 7 monomer units
-
?
o-dianisidine + H2O2
? + H2O
show the reaction diagram
-
-
-
?
phenol + H2O2
? + H2O
show the reaction diagram
about 90% conversion
products are oligomers of different weight, i.g. of 27 monomer units and of 23 monomer units
-
?
2 H2O2
O2 + 2 H2O
show the reaction diagram
-
-
-
-
?
2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) + H2O2
? + H2O
show the reaction diagram
-
-
-
-
?
2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) + H2O2
oxidized 2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) + H2O
show the reaction diagram
H2O2
O2 + H2O
show the reaction diagram
isoniazid + H2O2
oxidized isoniazid + H2O
show the reaction diagram
-
-
-
-
?
o-dianisidine + H2O2
oxidized o-dianisidine + H2O
show the reaction diagram
-
-
-
-
?
o-phenylenediamine + H2O2
oxidized o-phenylenediamine + H2O
show the reaction diagram
-
-
-
-
?
pyrogallol + H2O2
? + H2O
show the reaction diagram
-
-
-
-
?
tert-butyl hydroperoxide + H2O2
oxidized tert-butyl hydroperoxide + H2O
show the reaction diagram
-
-
-
-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Fe2+
-
the bacterial manganese-dependent SOD A when bound to iron has peroxidase activity
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid)
-
acts as an inhibitor of peroxidase activity at lower pH (pH 3.8-4.5)
azide
cyanide
H2O2
-
enzyme inhibition is observed at hydrogen peroxide concentrations greater than 1.0 mM
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.012 - 3
2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid)
0.06 - 100
H2O2
0.04 - 0.12
o-Dianisidine
1.1 - 1.6
pyrogallol
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1.1 - 210000
2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid)
0.0061 - 18000
H2O2
24 - 71
o-Dianisidine
27 - 69
pyrogallol
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
26 - 2300
2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid)
5.7 - 3200
H2O2
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.007 - 0.25
azide
0.012 - 0.39
cyanide
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.16
-
catalase activity, mutant enzyme H106Y, at pH 7.0 and 37°C
0.25
-
catalase activity, mutant enzyme H106C, at pH 7.0 and 37°C
0.95
-
catalase activity, mutant enzyme H267Y, at pH 7.0 and 37°C
1.9
-
catalase activity, mutant enzyme W105F, at pH 7.0 and 37°C
10
-
catalase activity, mutant enzyme R102C, at pH 7.0 and 37°C
12
-
peroxidase activity, mutant enzyme H267Y, at pH 7.0 and 37°C
1300
-
peroxidase activity, mutant enzyme W105L, at pH 7.0 and 37°C
18
-
peroxidase activity, mutant enzyme H106Y, at pH 7.0 and 37°C
19
-
catalase activity, mutant enzyme R102L, at pH 7.0 and 37°C
2200
-
catalase specific activity, at pH 7.0 and 37°C
35
-
catalase activity, mutant enzyme R102K, at pH 7.0 and 37°C
5.9
-
catalase activity, mutant enzyme W105L, at pH 7.0 and 37°C
63
-
peroxidase activity, mutant enzyme R102C, at pH 7.0 and 37°C
660
-
peroxidase activity, wild type enzyme, at pH 7.0 and 37°C
8.3
-
peroxidase specific activity, using o-dianisidine as substrate, at pH 4.3 and 25°C
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.5
-
peroxidase pH optimum
4.7
-
maximal peroxidase activity
5.5
-
peroxidase activity of KatG
6.5
-
catalase pH optimum
7.2
-
maximal catalase activity
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
UniProt
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
-
periplasmic catalase-peroxidases contributes to bacterial virulence
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
165000
-
gel filtration
80000
-
about 80000, SDS-PAGE
84000
-
2 * 84000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
homodimer
-
2 * 84000, SDS-PAGE
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
DELTA200-214
-
mutation eliminates catalase activity, but variant is substantially more active as peroxidase
DELTA209-228
-
variant is substantially more active as peroxidase
DELTAL193-N228
-
mutant lacking Large Loop1, mutation eliminates catalase activity, but variant is substantially more active as peroxidase
H106C
H106Y
H257Y
-
the mutant shows 0.05% of wild type catalase activity and 1.8% of wild type peroxidase activity
H267Y
-
the peroxidatic-to-catalatic ratio of the mutant is increased 36fold, the heme content of the mutant is reduced relative to the wild type enzyme
R102C
R102K
R102L
W105F
W105L
Y111A
-
the mutation leads to a 5fold reduction in the apparent kcat for catalase activity and an 8fold decrease in the apparent second-order rate constant. For peroxidase activity, the H2O2- and 2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid)-dependent peroxidatic apparent kcat are reduced by 66% and 40%, respectively. Preparations of this variant yield a mixture of high- and low-spin heme states, thus creating the appearance of a transition between wild type (high-spin) and C-terminal lacking (low-spin) KatG
Y226F
-
mutation eliminates catalase activity, but variant is substantially more active as peroxidase
additional information
-
the heme environment of mutant KatGDELTAFG (lacking its FG insertion) is highly similar to wild type KatG, but the variant retains only 0.2% catalase activity. In contrast, the deletion reduces peroxidase activity by only 50%
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
65
-
the enzyme is completely inactive after less than 1.5 min at 65°C
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, 10 mM phosphate buffer, loss of activtiy
-20°C, Tris-HCl buffer, stable
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
recombinant protein
ammonium sulfate precipitation and DEAE-cellulose column chromatography
-
HisPur Cobalt column chromatography
-
Ni-NTA column chromatography
-
Ni-NTA column chromatography and phenyl-Sepharose column chromatography
-
Ni-NTA column chromatography, gel filtration
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Escherichia coli
expressed in Escherichia coli
-
expressed in Escherichia coli BL-21 DE3 pLysS cells
-
expressed in Escherichia coli BL21(DE3) cells
-
expressed in Escherichia coli Rosetta 2 DE3 cells
-
mutant KatGDELTAFG is expressed in Escherichia coli BL-21 (DE3) pLysS cells
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
addition of 0.5 mM Fe(II)-citrate to culture liquid results in 36% increase in enzyme, substrate o-dianisidine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Varnado, C.L.; Hertwig, K.M.; Thomas, R.; Roberts, J.K.; Goodwin, D.C.
Properties of a novel periplasmic catalase-peroxidase from Escherichia coli O157:H7
Arch. Biochem. Biophys.
421
166-174
2004
Escherichia coli
Manually annotated by BRENDA team
Moore, R.L.; Powell, L.J.; Goodwin, D.C.
The kinetic properties producing the perfunctory pH profiles of catalase-peroxidases
Biochim. Biophys. Acta
1784
900-907
2008
Escherichia coli
Manually annotated by BRENDA team
Moore, R.L.; Cook, C.O.; Williams, R.; Goodwin, D.C.
Substitution of strictly conserved Y111 in catalase-peroxidases: Impact of remote interdomain contacts on active site structure and catalytic performance
J. Inorg. Biochem.
102
1819-1824
2008
Escherichia coli
Manually annotated by BRENDA team
Singh, R.; Wiseman, B.; Deemagarn, T.; Jha, V.; Switala, J.; Loewen, P.
Comparative study of catalase-peroxidases (KatGs)
Arch. Biochem. Biophys.
471
207-214
2008
Archaeoglobus fulgidus, Burkholderia pseudomallei, Escherichia coli, Geobacillus stearothermophilus, Mycobacterium tuberculosis, Rhodobacter capsulatus, Synechocystis sp.
Manually annotated by BRENDA team
Li, Y.; Goodwin, D.C.
Vital roles of an interhelical insertion in catalase-peroxidase bifunctionality
Biochem. Biophys. Res. Commun.
318
970-976
2004
Escherichia coli
Manually annotated by BRENDA team
Hillar, A.; Peters, B.; Pauls, R.; Loboda, A.; Zhang, H.; Mauk, A.G.; Loewen, P.C.
Modulation of the activities of catalase-peroxidase HPI of Escherichia coli by site-directed mutagenesis
Biochemistry
39
5868-5875
2000
Escherichia coli, Escherichia coli UM262
Manually annotated by BRENDA team
Loewen, P.C.; Triggs, B.L.; George, C.S.; Hrabarchuk, B.E.
Genetic mapping of katG, a locus that affects synthesis of the bifunctional catalase-peroxidase hydroperoxidase I in Escherichia coli
J. Bacteriol.
162
661-667
1985
Escherichia coli
Manually annotated by BRENDA team
Smulevich, G.; Jakopitsch, C.; Droghetti, E.; Obinger, C.
Probing the structure and bifunctionality of catalase-peroxidase (KatG)
J. Inorg. Biochem.
100
568-585
2006
Escherichia coli, Mycobacterium tuberculosis (P9WIE5), Synechococcus sp. (Q31MN3), Burkholderia pseudomallei (Q939D2), Synechococcus sp. PCC 7942 (Q31MN3), Mycobacterium tuberculosis H37Rv (P9WIE5)
Manually annotated by BRENDA team
Di Gennaro, P.; Bargna, A.; Bruno, F.; Sello, G.
Purification of recombinant catalase-peroxidase HPI from E. coli and its application in enzymatic polymerization reactions
Appl. Microbiol. Biotechnol.
98
1119-1126
2014
Escherichia coli (B1IVD5), Escherichia coli, Escherichia coli DSM 1576 (B1IVD5)
Manually annotated by BRENDA team
Kudalkar, S.N.; Campbell, R.A.; Li, Y.; Varnado, C.L.; Prescott, C.; Goodwin, D.C.
Enhancing the peroxidatic activity of KatG by deletion mutagenesis
J. Inorg. Biochem.
116
106-115
2012
Escherichia coli
Manually annotated by BRENDA team
Ganini, D.; Petrovich, R.M.; Edwards, L.L.; Mason, R.P.
Iron incorporation into MnSOD A (bacterial Mn-dependent superoxide dismutase) leads to the formation of a peroxidase/catalase implicated in oxidative damage to bacteria
Biochim. Biophys. Acta
1850
1795-1805
2015
Escherichia coli
Manually annotated by BRENDA team