Reference on EC 1.1.1.95 - phosphoglycerate dehydrogenase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Uhr, M.L.; Sneddon, M.K.
Glycine and serine inhibition of D-glycerate dehydrogenase and 3-phosphoglycerate dehydrogenase of rat brain
FEBS Lett.
17
137-140
1971
Rattus norvegicus
Manually annotated by BRENDA team
Sugimoto, E.; Pizer, L.I.
The mechanism of end product inhibition of serine biosynthesis. I. purification and kinetics of phosphoglycerate dehydrogenase
J. Biol. Chem.
243
2081-2089
1968
Escherichia coli
Manually annotated by BRENDA team
Willis, J.E.; Sallach, H.J.
The occurence of D-3-phosphoglycerate dehydrogenase in animal tissues
Biochim. Biophys. Acta
81
39-54
1964
Bos taurus, Canis lupus familiaris, Frog, Gallus gallus, Oryctolagus cuniculus, Pigeon, Rattus norvegicus, Sus scrofa
-
Manually annotated by BRENDA team
Slaughter, J.C.; Davies, D.D.
3-Phosphoglycerate dehydrogenase from seedlings of Pisum sativum
Methods Enzymol.
41
278-281
1975
Pisum sativum
Manually annotated by BRENDA team
Feld, R.D.; Sallach, H.J.
D-3-Phosphoglycerate dehydrogenase from hog spinal cord-1
Methods Enzymol.
41
282-285
1975
Sus scrofa
Manually annotated by BRENDA team
Rosenblum, I.Y.; Sallach, H.J.
D-3-Phosphoglycerate dehydrogenase from wheat germ-1
Methods Enzymol.
41
285-289
1975
Triticum aestivum
Manually annotated by BRENDA team
Pizer, L.I.; Sugimoto, E.
3-Phosphoglycerate dehydrogenase (Escherichia coli)
Methods Enzymol.
17B
325-331
1971
Escherichia coli
-
Manually annotated by BRENDA team
Sojka, G.A.; Garner, H.R.
The serine biosynthetic pathway in Neurospora crassa
Biochim. Biophys. Acta
148
42-47
1967
Neurospora crassa
Manually annotated by BRENDA team
Umbarger, H.E.; Umbarger, M.A.
Biosynthetic pathway of serine in Salmonella typhimurium
Biochim. Biophys. Acta
62
193-195
1962
Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Pizer, L.I.; Ponce-de-Leon, M.; Michalka, J.
Serine biosynthesis and regulation in Haemophilus influenzae
J. Bacteriol.
97
1357-1361
1969
Haemophilus influenzae
Manually annotated by BRENDA team
Winicov, I.
Stereospecificity of hydrogen transfer by phosphoglycerate dehydrogenase
Biochim. Biophys. Acta
397
288-293
1975
Escherichia coli
Manually annotated by BRENDA team
Slaughter, J.C.
Inhibition of 3-phosphoglycerate dehydrogenase from Pisum sativum by purine nucleotides
Biochem. J.
135
563-565
1973
Pisum sativum
Manually annotated by BRENDA team
Saski, R.; Pizer, L.I.
Regulatory properties of purified 3-phosphoglycerate dehydrogenase from Bacillus subtilis
Eur. J. Biochem.
51
415-427
1975
Bacillus subtilis
Manually annotated by BRENDA team
Tobey, K.L.; Grant, G.A.
The nucleotide sequence of the serA gene of Escherichia coli and the amino acid sequence of the encoded protein, D-3-phosphoglycerate dehydrogenase
J. Biol. Chem.
261
12179-12183
1986
Escherichia coli
Manually annotated by BRENDA team
Lund, K.; Merrill, D.K.; Guynn, R.W.
Purification and subunit structure of phosphoglycerate dehydrogenase from rabbit liver
Biochem. J.
238
919-922
1986
Oryctolagus cuniculus
Manually annotated by BRENDA team
Boland, M.J.; Schubert, K.R.
Phosphoglycerate dehydrogenase from soybean nodules
Plant Physiol.
71
658-661
1983
Glycine max
Manually annotated by BRENDA team
Anderson, B.M.; Dubler, R.E.
Inactivation of chicken liver D-3 phosphoglycerate dehydrogenase by N-alkylmaleimides
Arch. Biochem. Biophys.
200
583-589
1980
Gallus gallus
Manually annotated by BRENDA team
Slaughter, J.C.
The amino acid sequence of yeast phosphoglycerate mutase
Biochem. Soc. Trans.
3
1058-1061
1975
Pisum sativum
-
Manually annotated by BRENDA team
Grant, G.A.; Keefer, L.M.; Bradshaw, R.A.
D-3-Phosphoglycerate dehydrogenase from chicken liver. I. Purification
J. Biol. Chem.
253
2724-2726
1978
Gallus gallus
Manually annotated by BRENDA team
Grant, G.A.; Bradshaw, R.A.
D-3-phosphoglycerate dehydrogenase from chicken liver. II. Chemical and physical properties
J. Biol. Chem.
253
2727-2731
1978
Gallus gallus
Manually annotated by BRENDA team
Schuller, D.J.; Grant, G.A.; Banaszak, L.J.
The allosteric ligand site in the Vmax-type cooperative enzyme phosphoglycerate dehydrogenase
Nat. Struct. Biol.
2
69-76
1995
Escherichia coli
Manually annotated by BRENDA team
Zhao, G.; Winkler, M.E.
A novel alpha-ketoglutarate reductase activity of the serA-encoded 3-phosphoglycerate dehydrogenase of Escherichia coli K-12, and its possible implications for human 2-hydroxyglutaric aciduria
J. Bacteriol.
178
232-239
1996
Escherichia coli
Manually annotated by BRENDA team
Grant, G.A.; Schuller, D.J.; Banaszak, L.J.
A model for the regulation of D-3-phosphoglycerate dehydrogenase, a Vmax-type allosteric enzyme
Protein Sci.
5
34-41
1996
Escherichia coli
Manually annotated by BRENDA team
Al-Rabiee, R.; Zhang, Y.; Grant, G.A.
The mechanism of velocity modulated allosteric regulation in D-3-phosphoglycerate dehydrogenase
J. Biol. Chem.
271
23235-23238
1996
Escherichia coli
Manually annotated by BRENDA team
Ho, C.L.; Noji, M.; Saito, M.; Saito, K.
Regulation of serine biosynthesis in Arabidopsis
J. Biol. Chem.
274
397-402
1999
Arabidopsis thaliana
Manually annotated by BRENDA team
Grant, G.A.; Hu, Z.; Xu, X.L.
Amino acid residue mutations uncouple cooperative effects in Escherichia coli D-3-phosphoglycerate dehydrogenase
J. Biol. Chem.
276
17844-17850
2001
Escherichia coli
Manually annotated by BRENDA team
Grant, G.A.; Kim, S.J.; Xu, X.L.; Hu, Z.
The contribution of adjacent subunits to the active sites of D-3-phosphoglycerate dehydrogenase
J. Biol. Chem.
274
5357-5361
1999
Escherichia coli
Manually annotated by BRENDA team
Peters-Wendisch, P.; Netzer, R.; Eggeling, L.; Sahm, H.
3-Phosphoglycerate dehydrogenase from Corynebacterium glutamicum: the C-terminal domain is not essential for activity but is required for inhibition by L-serine
Appl. Microbiol. Biotechnol.
60
437-441
2002
Corynebacterium glutamicum
Manually annotated by BRENDA team
Konno, A.; Oota, Y.; Hashimoto, Y.; Kon, Y.; Iwanaga, T.
Localization of 3-phosphoglycerate dehydrogenase, an enzyme involved in de novo L-serine biosynthesis, in the peripheral nervous system and non-neuronal tissues of mice
Biomed. Res.
25
195-200
2004
Mus musculus
-
Manually annotated by BRENDA team
Ali, V.; Hashimoto, T.; Shigeta, Y.; Nozaki, T.
Molecular and biochemical characterization of D-phosphoglycerate dehydrogenase from Entamoeba histolytica. A unique enteric protozoan parasite that possesses both phosphorylated and nonphosphorylated serine metabolic pathways
Eur. J. Biochem.
271
2670-2681
2004
Entamoeba histolytica, Entamoeba histolytica (Q76KF5)
Manually annotated by BRENDA team
Grant, G.A.; Hu, Z.; Xu, X.L.
Cofactor binding to Escherichia coli D-3-phosphoglycerate dehydrogenase induces multiple conformations which alter effector binding
J. Biol. Chem.
277
39548-39553
2002
Escherichia coli
Manually annotated by BRENDA team
Albers, E.; Laize, V.; Blomberg, A.; Hohmann, S.; Gustafsson, L.
Ser3p (Yer081wp) and Ser33p (Yil074cp) are phosphoglycerate dehydrogenases in Saccharomyces cerevisiae
J. Biol. Chem.
278
10264-10272
2003
Saccharomyces cerevisiae
Manually annotated by BRENDA team
Dey, S.; Hu, Z.; Xu, X.L.; Sacchettini, J.C.; Grant, G.A.
D-3-phosphoglycerate dehydrogenase from Mycobacterium tuberculosis is a link between the E. coli and mammalian enzymes
J. Biol. Chem.
280
1484-14891
2005
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Dey, S.; Grant, G.A.; Sacchettini, J.C.
Crystal structure of Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase: extreme asymmetry in a tetramer of identical subunits
J. Biol. Chem.
280
14892-14899
2005
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Peters-Wendisch, P.; Stolz, M.; Etterich, H.; Kennerknecht, N.; Sahm, H.; Eggeling, L.
Metabolic engineering of Corynebacterium glutamicum for L-serine production
Appl. Environ. Microbiol.
71
7139-7144
2005
Corynebacterium glutamicum
Manually annotated by BRENDA team
Liberles, J.S.; Thorolfsson, M.; Martinez, A.
Allosteric mechanisms in ACT domain containing enzymes involved in amino acid metabolism
Amino Acids
28
1-12
2005
Escherichia coli, Escherichia coli (P0A9T0)
Manually annotated by BRENDA team
Grant, G.A.; Hu, Z.; Xu, X.L.
Identification of amino acid residues contributing to the mechanism of cooperativity in Escherichia coli D-3-phosphoglycerate dehydrogenase
Biochemistry
44
16844-16852
2005
Escherichia coli, Escherichia coli (P0A9T0)
Manually annotated by BRENDA team
Thompson, J.R.; Bell, J.K.; Bratt, J.; Grant, G.A.; Banaszak, L.J.
Vmax regulation through domain and subunit changes. The active form of phosphoglycerate dehydrogenase
Biochemistry
44
5763-5773
2005
Escherichia coli, Escherichia coli (P0A9T0)
Manually annotated by BRENDA team
Ida, T.; Kugimiya, M.; Kogure, M.; Takahashi, R.; Tokuyama, T.
Phylogenetic relationships among ammonia-oxidizing bacteria as revealed by gene sequences of glyceraldehyde 3-phosphate dehydrogenase and phosphoglycerate kinase
J. Biosci. Bioeng.
99
569-576
2005
Escherichia coli K-12, Nitrosolobus sp., Nitrosomonas sp., Nitrosospira multiformis (Q4JDI4), Nitrosospira sp., Nitrosovibrio sp.
Manually annotated by BRENDA team
Shimizu, Y.; Sakuraba, H.; Doi, K.; Ohshima, T.
Molecular and functional characterization of D-3-phosphoglycerate dehydrogenase in the serine biosynthetic pathway of the hyperthermophilic archaeon Sulfolobus tokodaii
Arch. Biochem. Biophys.
470
120-128
2008
Sulfolobus tokodaii
Manually annotated by BRENDA team
Takasaki, C.; Miura, E.; Watanabe, M.
Segmental and complementary expression of L-serine biosynthetic enzyme 3-phosphoglycerate dehydrogenase and neutral amino acid transporter ASCT1 in the mouse kidney
Biomed. Res.
28
61-69
2007
Mus musculus, Mus musculus (Q61753)
Manually annotated by BRENDA team
Jun, d.o..Y.; Park, H.S.; Lee, J.Y.; Baek, J.Y.; Park, H.K.; Fukui, K.; Kim, Y.H.
Positive regulation of promoter activity of human 3-phosphoglycerate dehydrogenase (PHGDH) gene is mediated by transcription factors Sp1 and NF-Y
Gene
414
106-114
2008
Homo sapiens
Manually annotated by BRENDA team
Dey, S.; Hu, Z.; Xu, X.L.; Sacchettini, J.C.; Grant, G.A.
The effect of hinge mutations on effector binding and domain rotation in Escherichia coli D-3-phosphoglycerate dehydrogenase
J. Biol. Chem.
282
18418-18426
2007
Escherichia coli, Escherichia coli (P0A9T0)
Manually annotated by BRENDA team
Burton, R.L.; Chen, S.; Xu, X.L.; Grant, G.A.
A novel mechanism for substrate inhibition in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
J. Biol. Chem.
282
31517-31524
2007
Mycobacterium tuberculosis, Mycobacterium tuberculosis (P9WNX3), Mycobacterium tuberculosis H37Rv (P9WNX3)
Manually annotated by BRENDA team
Waditee, R.; Bhuiyan, N.H.; Hirata, E.; Hibino, T.; Tanaka, Y.; Shikata, M.; Takabe, T.
Metabolic engineering for betaine accumulation in microbes and plants
J. Biol. Chem.
282
34185-34193
2007
Aphanothece halophytica
Manually annotated by BRENDA team
Dey, S.; Burton, R.L.; Grant, G.A.; Sacchettini, J.C.
Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry
47
8271-8282
2008
Mycobacterium tuberculosis, Mycobacterium tuberculosis (P9WNX3), Mycobacterium tuberculosis H37Rv (P9WNX3)
Manually annotated by BRENDA team
Burton, R.L.; Chen, S.; Xu, X.L.; Grant, G.A.
Role of the anion-binding site in catalysis and regulation of Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry
48
4808-4815
2009
Mycobacterium tuberculosis, Mycobacterium tuberculosis (P9WNX3), Mycobacterium tuberculosis H37Rv (P9WNX3)
Manually annotated by BRENDA team
Furuya, S.; Yoshida, K.; Kawakami, Y.; Yang, J.H.; Sayano, T.; Azuma, N.; Tanaka, H.; Kuhara, S.; Hirabayashi, Y.
Inactivation of the 3-phosphoglycerate dehydrogenase gene in mice: changes in gene expression and associated regulatory networks resulting from serine deficiency
Funct. Integr. Genomics
8
235-249
2008
Homo sapiens, Mus musculus
Manually annotated by BRENDA team
Tabatabaie, L.; de Koning, T.J.; Geboers, A.J.; van den Berg, I.E.; Berger, R.; Klomp, L.W.
Novel mutations in 3-phosphoglycerate dehydrogenase (PHGDH) are distributed throughout the protein and result in altered enzyme kinetics
Hum. Mutat.
30
749-756
2009
Homo sapiens, Homo sapiens (O43175)
Manually annotated by BRENDA team
Jeon, G.S.; Choi, D.H.; Lee, H.N.; Kim, D.W.; Chung, C.K.; Cho, S.S.
Expression of L-serine biosynthetic enzyme 3-phosphoglycerate dehydrogenase (Phgdh) and neutral amino acid transporter ASCT1 following an excitotoxic lesion in the mouse hippocampus
Neurochem. Res.
34
827-834
2009
Mus musculus
Manually annotated by BRENDA team
Kinoshita, M.O.; Shinoda, Y.; Sakai, K.; Hashikawa, T.; Watanabe, M.; Machida, T.; Hirabayashi, Y.; Furuya, S.
Selective upregulation of 3-phosphoglycerate dehydrogenase (Phgdh) expression in adult subventricular zone neurogenic niche
Neurosci. Lett.
453
21-26
2009
Mus musculus
Manually annotated by BRENDA team
Du, H.; Vitiello, D.; Sarno, J.; Taylor, H.
3-Phosphoglycerate dehydrogenase (3-PGDH) expression is regulated by HOXA10 in murine endometrium and human endometrial cells
Reproduction
139
237-245
2009
Homo sapiens, Homo sapiens (O43175), Mus musculus, Mus musculus (Q61753)
Manually annotated by BRENDA team
Burton, R.L.; Chen, S.; Xu, X.L.; Grant, G.A.
Transient kinetic analysis of the interaction of L-serine with Escherichia coli D-3-phosphoglycerate dehydrogenase reveals the mechanism of V-type regulation and the order of effector binding
Biochemistry
48
12242-12251
2009
Escherichia coli, Escherichia coli (P0A9T0)
Manually annotated by BRENDA team
Grant, G.A.
Transient kinetic analysis of L-serine interaction with Escherichia coli D-3-phosphoglycerate dehydrogenase containing amino acid mutations in the hinge regions
Biochemistry
50
2900-2906
2011
Escherichia coli
Manually annotated by BRENDA team
Mishra, V.; Kumar, A.; Ali, V.; Nozaki, T.; Zhang, K.Y.; Bhakuni, V.
Glu-108 is essential for subunit assembly and dimer stability of D-phosphoglycerate dehydrogenase from Entamoeba histolytica
Mol. Biochem. Parasitol.
181
117-124
2012
Entamoeba histolytica
Manually annotated by BRENDA team
Kumar, S.M.; Pampa, K.J.; Manjula, M.; Hemantha Kumar, G.; Kunishima, N.; Lokanath, N.K.
Crystal structures of type IIIH NAD-dependent D-3-phosphoglycerate dehydrogenase from two thermophiles
Biochem. Biophys. Res. Commun.
451
126-130
2014
Pyrococcus horikoshii (O58256), Pyrococcus horikoshii, Pyrococcus horikoshii DSM 12428 (O58256), Sulfolobus tokodaii (Q972A9), Sulfolobus tokodaii
Manually annotated by BRENDA team
Fan, J.; Teng, X.; Liu, L.; Mattaini, K.R.; Looper, R.E.; Vander Heiden, M.G.; Rabinowitz, J.D.
Human phosphoglycerate dehydrogenase produces the oncometabolite D-2-hydroxyglutarate
ACS Chem. Biol.
10
510-516
2015
Homo sapiens
Manually annotated by BRENDA team
Xu, G.; Jin, X.; Guo, W.; Dou, W.; Zhang, X.; Xu, Z.
Characterization, modification, and overexpression of 3-phosphoglycerate dehydrogenase in Corynebacterium glutamicum for enhancing L-serine production
Ann. Microbiol.
65
929-935
2015
Corynebacterium glutamicum (F2X354), Corynebacterium glutamicum SYPS-062 (F2X354)
Manually annotated by BRENDA team
Xu, X.L.; Chen, S.; Salinas, N.D.; Tolia, N.H.; Grant, G.A.
Comparison of type 1 D-3-phosphoglycerate dehydrogenases reveals unique regulation in pathogenic Mycobacteria
Arch. Biochem. Biophys.
570
32-39
2015
Bacillus subtilis, Corynebacterium glutamicum, Homo sapiens, Mycobacterium marinum, Mycobacterium smegmatis, Mycobacterium tuberculosis, Streptomyces coelicolor (Q9Z564)
Manually annotated by BRENDA team
Xu, X.L.; Grant, G.A.
Regulation of Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase by phosphate-modulated quaternary structure dynamics and a potential role for polyphosphate in enzyme regulation
Biochemistry
53
4239-4249
2014
Mycobacterium tuberculosis
Manually annotated by BRENDA team
Deng, H.; Chen, C.; Sun, C.; Wei, C.
Construction and characterization of Escherichia coli D-3-phosphoglycerate dehydrogenase mutants with feedback-inhibition relief
Chin. J. Biotechnol.
32
468-477
2016
Escherichia coli
-
Manually annotated by BRENDA team
Singh, R.K.; Raj, I.; Pujari, R.; Gourinath, S.
Crystal structures and kinetics of Type III 3-phosphoglycerate dehydrogenase reveal catalysis by lysine
FEBS J.
281
5498-5512
2014
Entamoeba histolytica, Entamoeba histolytica (Q76KF5)
Manually annotated by BRENDA team
Mishra, V.; Kumar, A.; Ali, V.; Zhang, K.Y.; Nozaki, T.
Characterization of pH-induced transitions of Entamoeba histolytica D-phosphoglycerate dehydrogenase
Int. J. Biol. Macromol.
79
284-289
2015
Entamoeba histolytica
Manually annotated by BRENDA team
Ehmsen, J.T.; Ma, T.M.; Sason, H.; Rosenberg, D.; Ogo, T.; Furuya, S.; Snyder, S.H.; Wolosker, H.
D-serine in glia and neurons derives from 3-phosphoglycerate dehydrogenase
J. Neurosci.
33
12464-12469
2013
Mus musculus
Manually annotated by BRENDA team
Deng, Y.; Wu, D.; Tachibana, H.; Cheng, X.
Molecular cloning and expression of phosphoglycerate dehydrogenase and phosphoserine aminotransferase in the serine biosynthetic pathway from Acanthamoeba castellanii
Parasitol. Res.
114
1387-1395
2015
Acanthamoeba castellanii, Acanthamoeba castellanii (U3RH61), Acanthamoeba castellanii ATCC 30011 (U3RH61)
Manually annotated by BRENDA team
Benstein, R.M.; Ludewig, K.; Wulfert, S.; Wittek, S.; Gigolashvili, T.; Frerigmann, H.; Gierth, M.; Fluegge, U.I.; Krueger, S.
Arabidopsis phosphoglycerate dehydrogenase1 of the phosphoserine pathway is essential for development and required for ammonium assimilation and tryptophan biosynthesis
Plant Cell
25
5011-5029
2013
Arabidopsis thaliana, Arabidopsis thaliana (O04130), Arabidopsis thaliana (O49485), Arabidopsis thaliana (Q9LT69)
Manually annotated by BRENDA team
Toujani, W.; Munoz-Bertomeu, J.; Flores-Tornero, M.; Rosa-Tellez, S.; Anoman, A.D.; Alseekh, S.; Fernie, A.R.; Ros, R.
Functional characterization of the plastidial 3-phosphoglycerate dehydrogenase family in Arabidopsis
Plant Physiol.
163
1164-1178
2013
Arabidopsis thaliana, Arabidopsis thaliana (Q9LT69)
Manually annotated by BRENDA team
Toujani, W.; Munoz-Bertomeu, J.; Flores-Tornero, M.; Rosa-Tellez, S.; Anoman, A.; Ros, R.
Identification of the phosphoglycerate dehydrogenase isoform EDA9 as the essential gene for embryo and male gametophyte development in Arabidopsis
Plant Signal. Behav.
8
e27207
2013
Arabidopsis thaliana (O49485)
Manually annotated by BRENDA team
Wang, Q.; Qi, Y.; Yin, N.; Lai, L.
Discovery of novel allosteric effectors based on the predicted allosteric sites for Escherichia coli D-3-phosphoglycerate dehydrogenase
PLoS ONE
9
e94829
2014
Escherichia coli, Escherichia coli (P0A9T0)
Manually annotated by BRENDA team