5.4.2.7: phosphopentomutase

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For detailed information about phosphopentomutase, go to the full flat file.

Reaction

Synonyms

alpha-D-Glucose-1,6-bisphosphate:deoxy-D-ribose-1-phosphate phosphotransferase, alpha-D-ribose1,5-phosphomutase, deoB, Deoxyribomutase, Deoxyribose phosphomutase, EC 2.7.5.6, PGM3, Phosphodeoxyribomutase, Phosphomutase, deoxyribose, phosphopentomutase, Phosphoribomutase, PPM, PPMase

ECTree

     5 Isomerases

         5.4 Intramolecular transferases

             5.4.2 Phosphotransferases (phosphomutases)

                5.4.2.7 phosphopentomutase

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Results	in table
16	Activating Compound
14301	AA Sequence
3	Application
1	CAS Registry Number
11	Cloned(Commentary)
4	Crystallization (Commentary)
3	General Information
3	General Stability
8	Inhibitors
2	kcat/KM [mM/s]
13	KM Value [mM]
20	Metals/Ions
15	Molecular Weight [Da]
18	Natural Substrates/ Products (Substrates)
30	Organism
7	Pathway
64	PDB ID
8	pH Optimum
1	pH Range
1	pH Stability
1	pI Value
4	Posttranslational Modification
8	Protein Variants
11	Purification (Commentary)
1	Reaction
5	Reaction Type
29	Reference
2	Source Tissue
10	Specific Activity [micromol/min/mg]
1	Storage Stability
59	Substrates and Products (Substrate)
19	Subunits
29	Synonyms
1	Systematic Name
8	Temperature Optimum [°C]
2	Temperature Range [°C]
8	Temperature Stability [°C]
4	Turnover Number [1/s]

Crystallization

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Crystallization on EC 5.4.2.7 - phosphopentomutase

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CRYSTALLIZATION (Commentary)

ORGANISM

UNIPROT

LITERATURE

enzyme alone, co-crystallized with ribose 5-phosphate, co-crystallized with glucose 1,6-bisphosphate, and following activation with glucose 1,6-bisphosphate, hanging drop vapor diffusion method, using 100 mM Bis-Tris, pH 5.5, 50 mM MnCl2, 14% (w/v) polyethylene glycol 3350, and 75 mM NH4CH3COO

Bacillus cereus

Q818Z9

715660

hanging drop vapor diffusion method, using 100 mM Bis-Tris pH 5.5, 50 mM MnCl2, 13-16% PEG 3350, and 25-100 mM NH4CH3COO

Bacillus cereus

-

713648

hanging drop vapor diffusion method, using 100 mM Bis-Tris pH 5.5, 50 mM MnCl2, 13-16% PEG 3350, and 25–-100 mM NH4CH3COO

Bacillus cereus

-

713648

purified recombinant detagged wild-type and mutant T85Q and T85E enzymes free or in complex with glucose 1,6-bisphosphate, hanging drop vapor diffusion method, for the free enzyme crystals: mixing of 10 mg/ml protein in 25mM Tris-HCl, pH 7.5, and 1 mM MnCl2, with reservoir solution containing 100 mM Bis-Tris, pH 5.5, 50 mM MnCl2, 17% PEG 3350 (wild-type) or 13% PEG 3350 (mutant T85Q), and 75 mM NH4CH3COO, for the complex crystals: mixing of 10 mg/ml protein in 5 mM glucose 1,6-bisphosphate, 25 mM Tris-HCl, pH 7.4, and 1 mM MnCl2 with a reservoir solution containing 100 mM Bis-Tris, pH 5.5, 50 mM MnCl2, 14% PEG 3350, and 50 mM NH4CH3COO, X-ray diffraction structure determination and analysis at 1.8-2.3 A resolution

Bacillus cereus

Q818Z9

726977