5.1.3.13: dTDP-4-dehydrorhamnose 3,5-epimerase

This is an abbreviated version!
For detailed information about dTDP-4-dehydrorhamnose 3,5-epimerase, go to the full flat file.

Word Map on EC 5.1.3.13

5.1.3.13

4,6-dehydratase

o-antigen

deoxysugars

glucose-1-phosphate

dtdp-d-glucose

dtmp

medicine

dtdp-rhamnose

synthesis

Reaction

Synonyms

3,5-epimerase, Agl13, bifunctional UDP-4-keto-6-deoxy-D-glucose epimerase/reductase, C14F11.6, deoxythymidine diphosphate-4-dehydrorhamnose 3,5-epimerase, deoxythymidine diphospho-4-keto-6-deoxyglucose 3,5-epimerase, DnmU, dTDP-4-dehydro-6-deoxy-glucose-3,5-epimerase, dTDP-4-dehydrorhamnose 3,5-epimerase, dTDP-4-keto-6-deoxy-D-hexulose 3,5-epimerase, dTDP-4-keto-6-deoxyglucose 3,5-epimerase, dTDP-4-keto-L-rhamnose 3,5-epimerase, dTDP-6-deoxy-D-xylo-4-hexulose 3',5'-epimerase, dTDP-L-rhamnose synthetase, Epimerase, thymidine diphospho-4-ketorhamnose 3,5-, NovW gene product, RfbC, RmbC, rml-3, RmlC, TDP-4-keto-6-deoxy-D-glucose 3,5-epimerase, TDP-4-keto-L-rhamnose-3,5-epimerase, TDP-4-ketorhamnose 3,5-epimerase, TDP-6-deoxy-D-xylo-4-hexopyranosid-4-ulose 3,5-epimerase, Thymidine diphospho-4-ketorhamnose 3,5-epimerase, UGER

ECTree

5 Isomerases

5.1 Racemases and epimerases

5.1.3 Acting on carbohydrates and derivatives

5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase

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Results	in table
29027	AA Sequence
6	Application
1	CAS Registry Number
12	Cloned(Commentary)
5	Cofactor
6	Crystallization (Commentary)
27	General Information
9	IC50 Value
10	Inhibitors
7	KM Value [mM]
1	Localization
2	Metals/Ions
8	Molecular Weight [Da]
21	Natural Substrates/ Products (Substrates)
221	Organism
11	Pathway
90	PDB ID
5	pH Optimum
6	Protein Variants
8	Purification (Commentary)
3	Reaction
5	Reaction Type
29	Reference
6	Source Tissue
32	Substrates and Products (Substrate)
6	Subunits
55	Synonyms
1	Systematic Name
4	Temperature Optimum [°C]
1	Temperature Stability [°C]
6	Turnover Number [1/s]

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Cloned on EC 5.1.3.13 - dTDP-4-dehydrorhamnose 3,5-epimerase

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cloned into pET23a(+) with an N-terminal 6× His tag and a linker consisting of Gly-Ser-Met-Ala, overexpression in Escherichia coli

Pseudomonas aeruginosa

675420

cloned into pET23b using the Ligation Independent Clone system

Mycobacterium tuberculosis

675420

expression in Escherichia coli

3 entries

gene agl13, organized in a rmlABCD type cluster, sequence comparisons, functional recombinant expression of cellulose-bound CBD-Agl13 in Haloferax volcanii strain WR536

Haloferax volcanii

D4GU69

749151

gene dnmU, DNA and amino acid sequence determination, analysis, and comparison, genetic organization, overview. Recombinant expression in Escherichia coli

Streptomyces peucetius

C5J048, O33707

726772

gene L780, transcription profiling of UGER, phylogenetic analysis

Acanthamoeba polyphaga Mimivirus

E3VXL5

716065

gene rmbC, DNA and amino acid sequence determination, analysis, and comparison, genetic organization, overview. Recombinant expression in Escherichia coli

Streptomyces peucetius

C5J048, O33707

726772

gene rml-3, sequence comparisons and phyylogenetic analysis of rml genes, recombinant expression in Escherichia coli strain BL21(DE3), coexpression with genes rml-1, rml-2, and rml-4

Caenorhabditis elegans

Q17993

747027

recombinant His-tagged enzyme expression in Escherichia coli strain BL21(DE3) Magic

Bacillus anthracis

Q81TP1

746670