4.3.1.12: ornithine cyclodeaminase

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For detailed information about ornithine cyclodeaminase, go to the full flat file.

Reaction

Synonyms

AtOCD, cyclase, ornithine (deaminating), deaminase, ornithine cyclo-, OCD, ornithine cyclase, ornithine cyclase (deaminating), ornithine cyclo-deaminase, ornithine cyclodeamidase, ornithine cyclodeaminase, ornithine cyclodeaminase/mucrystaline family protein, SsOCD1

ECTree

     4 Lyases

         4.3 Carbon-nitrogen lyases

             4.3.1 Ammonia-lyases

                4.3.1.12 ornithine cyclodeaminase

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Results	in table
3	Activating Compound
4472	AA Sequence
1	Application
1	CAS Registry Number
6	Cloned(Commentary)
12	Cofactor
2	Crystallization (Commentary)
1	Expression
3	General Information
2	General Stability
5	Inhibitors
14	KM Value [mM]
1	Localization
6	Molecular Weight [Da]
34	Natural Substrates/ Products (Substrates)
45	Organism
3	Oxidation Stability
10	Pathway
28	PDB ID
7	pH Optimum
2	pH Range
1	pI Value
3	Purification (Commentary)
2	Reaction
2	Reaction Type
33	Reference
2	Source Tissue
9	Specific Activity [micromol/min/mg]
6	Storage Stability
59	Substrates and Products (Substrate)
3	Subunits
17	Synonyms
1	Systematic Name
8	Temperature Optimum [°C]
1	Temperature Range [°C]

Crystallization

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Crystallization on EC 4.3.1.12 - ornithine cyclodeaminase

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CRYSTALLIZATION (Commentary)

ORGANISM

UNIPROT

LITERATURE

hanging-drop vapor diffusion method, crystal structure of the enzyme in complex with NADH, refined to 1.8 A resolution, crystal structure of crystals grown in presence of L-ornithine, refined to 1.6 A resolution

Pseudomonas putida

-

661097

vapor-diffusion method, the best diffraction-quality crystals are obtained from solutions of 40%(v/v) 2-methyl-2,4-pentanediol buffered at pH 6.0 with 0.1 M MES and diffracted X-rays to 1.68 A resolution. Crystals belong to space group P2(1)2(1)2(1), with unit-cell parameters a = 70.0, b = 78.3, c = 119.4 A

Pseudomonas putida

-

660605