3.5.1.88: peptide deformylase

This is an abbreviated version!
For detailed information about peptide deformylase, go to the full flat file.

Word Map on EC 3.5.1.88

3.5.1.88

actinonin

medicine

n-formylated

deformylation

eubacteria

hydroxamic

drug development

formyltransferase

oxazolidinone

catarrhalis

linezolid

moraxella

hexxh

biotechnology

synthesis

agriculture

molecular biology

analysis

Reaction

Synonyms

AtDEF1.1, AtDEF1.2, AtDEF2, AtPDF1A, AtPDF1B, AtPDF1Bt, AtPDF2, BbPDF, BcPDF, BcPDF2, DEF, Def1, DEF2, deformylase, peptide N-formylmethionine, EC 3.5.1.27, EcPDF, ECPDF1B, EfPDF, HpPDF, HsPDF, hydrolase, aminoacyl-transfer ribonucleate, LiPDF, mPDF, Ni-peptide deformylase, PDF, PDF-1, PDF-2, PDF1A, PDF1B, PDF2, PdfA, PdfB, PdfC, peptide deformylase, peptide deformylase 1, peptide deformylase 1A, peptide deformylase 1B, peptide deformylase 2, Pf PDF, PfPDF, Polypeptide deformylase, SaPDF, sPDF, TbPDF1, TbPDF2, type I PDF, type II PDF, type II peptide deformylase, Vp 16 PDF1B, Vp16 PDF, Vp16T, XOO1075, XoPDF

ECTree

3 Hydrolases

3.5 Acting on carbon-nitrogen bonds, other than peptide bonds

3.5.1 In linear amides

3.5.1.88 peptide deformylase

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Results	in table
4	Activating Compound
61475	AA Sequence
102	Application
4	CAS Registry Number
79	Cloned(Commentary)
59	Crystallization (Commentary)
157	Disease/ Diagnostics
4	Expression
124	General Information
18	General Stability
565	IC50 Value
1419	Inhibitors
17	kcat/KM [mM/s]
169	Ki Value [mM]
154	KM Value [mM]
25	Localization
199	Metals/Ions
27	Molecular Weight [Da]
95	Natural Substrates/ Products (Substrates)
1	Organic Solvent Stability
471	Organism
16	Oxidation Stability
250	PDB ID
26	pH Optimum
8	pH Range
2	pH Stability
1	pI Value
89	Protein Variants
75	Purification (Commentary)
1	Reaction
38	Reaction Type
252	Reference
3	Renatured (Commentary)
53	Source Tissue
8	Specific Activity [micromol/min/mg]
7	Storage Stability
354	Substrates and Products (Substrate)
44	Subunits
285	Synonyms
1	Systematic Name
21	Temperature Optimum [°C]
3	Temperature Range [°C]
13	Temperature Stability [°C]
130	Turnover Number [1/s]

Molecular Weight

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of the Enzyme Summary Page.

Molecular Weight on EC 3.5.1.88 - peptide deformylase

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17480

19000

19200

20000

20230

Leptospira interrogans

Q93LE9

2 * 20230, mass spectrometry

654420

20970

Helicobacter pylori

Q672W7

x * 20970, mass spectrometry

654454

20973

Helicobacter pylori

Q672W7

x * 20973, calculation from nucleotide sequence

654454

21800

Staphylococcus epidermidis

Q5HPX6, Q5HQ78

1 * 21800, gel filtration

22000

22300

2 * 22300, recombinant enzyme, in solution, mainly, SDS-PAGE

733007

22500

Mycobacterium tuberculosis

x * 22500, calculated from amino acid sequence

719526

22600

2 entries

25000

Arabidopsis thaliana

x * 25000, mature enzyme, SDS-PAGE

721088

29000

Mycobacterium tuberculosis

x * 29000, SDS-PAGE

719526

31000

Mycobacterium tuberculosis

SDS-PAGE, Western blotting using an anti-his tag antibody

671700, 674257

40000

Arabidopsis thaliana

gel filtration

674518

43400

Leptospira interrogans

gel filtration

46100

recombinant enzyme, gel filtration

733007

60000

Borreliella burgdorferi

x * 22000 + X * 60000, SDS-PAGE

684694