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3.5.1.23: ceramidase

This is an abbreviated version!
For detailed information about ceramidase, go to the full flat file.

Word Map on EC 3.5.1.23

Reaction

a ceramide
+
H2O
=
a carboxylate
+
sphingosine

Synonyms

(dihydro)ceramidase, AC, aCDase, ACER, ACER type 3, ACER-2, ACER1, ACER2, ACER3, acid ceramidase, acylsphingosine deacylase, adiponectin receptor, ADIPOR2, alkaline ceramidase, alkaline ceramidase 1, alkaline ceramidase 2, alkaline ceramidase 3, alkCDase, alkCDase-1, alkCDase-2, ASAH-1, ASAH1, asah1b, ASAH2, ASAH2B, ASAH3, AsahA, AtACER, AtNCER1, bwa, CBCDase, CDase, CDase II, CER2, ceramidase, Dacer, Drosophila alkaline ceramidase, glycosphingolipid ceramide deacylase, Golgi alkaline ceramidase, haCER1, intramembrane ceramidase, LsnCer, maCER1, mt-CDase, N-acylsphingosine amidohydrolase, N-acylsphingosine amidohydrolase 2, N-acylsphingosine amidohydrolase-1, N-acylsphingosine aminohydrolase, N-acylsphingosine deacylase, N-CDase, nCDase, ncer1, neutral CDase, neutral ceramidase, neutral ceramidase 2, NlnCDase, OsCDase, PaCD, PaCDase, pan-ceramidase, PHP32, phytoalkaline ceramidase, phytoCDase, Putative 32 KDA heart protein, SCDase, sphingolipid ceramide N-deacylase, Tncer, TOD1, turgor regulation defect 1, Ydc1p, yeast dihydroceramidase 1, yeast phyto-ceramidase 1, Ypc1p, znCD

ECTree

     3 Hydrolases
         3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
             3.5.1 In linear amides
                3.5.1.23 ceramidase

Inhibitors

Inhibitors on EC 3.5.1.23 - ceramidase

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INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
(1R, 2R)-2-(N-tetradecanoylamino)-1-(4-nitrophenyl)-1,3-propanediol
inhibits in vitro
(1R,2R)-2-(N-tetradecanoylamino)-1-(4-nitrophenyl)-1,3-propanediol
(1R,2R)-2-N-(tetradecanoylamino)-1-(4'-nitrophenyl)-propyl-1,3-O,O-(N,N-dimethylamino)acetate dihydrochloride
i.e. LCL521 or Di-DMG-B13, is a lysosomotropic inhibitor of ACDase, inhibition mechanism, overview. Low dose of LCL521 (0.001 mM) effectively inhibits ACDase in cells, but the effects are transient. A higher dose of LCL521 (0.01 mM) causes profound decrease of sphingosine and increase of ceramide, but additionally affects the processing and regeneration of the ACDase protein, with biphasic and reversible effects on the expression of ACDase, which parallels the long term changes of cellular sphingosine and ceramide. Finally, the higher concentrations of LCL521 also inhibit dihydroceramide desaturase (DES-1, EC 1.14.19.17). LCL521 inhibits ACDase specifically among the ceramidases in vitro, which is reinforced by the lysosomal targeting
(1R,2R)-2-N-myristoylamino-1-(4-nitrophenyl)-1,3-propandiol
(1S, 2R)-D-erythro-2-(N-myristoylamino)-1-phenyl-1-propanol
inhibitor of alkaline ceramidase; inhibitor of alkaline ceramidase; inhibitor of neutral ceramidase
(1S,2R)-2-N-myristoylamino-1-phenyl-1-propanol
(1S,2R)-D-erythro-2-(N-myristoylamino)-1-phenyl-1-propanol
(2E,4E)-N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]hexa-2,4-dienamide
-
(2S)-3-keto-dehydrosphingosine
-
mtCDase, weak inhibition
(2S)-3-keto-hexadecanoyl-ceramide
-
mtCDase, IC50: 0.6 mol%
(2S)-3-keto-sphinganine
-
mtCDase, IC50: 0.34 mol%
(E)-4-[(2S,3R)-N-1,3-dihydroxyoctadecan-2-ylamino]4-oxo-2-butenoic acid
-
(E)-N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]but-2-enamide
-
1-ethyl-3-(3-dimethylaminopropyl)carbodiimide
-
modification of carboxyl groups completely inhibits forward and reverse reaction
1-hexylcarbamoyl-5-fluorouracil
1-O-methyl-D-erythro-sphingosine
-
mtCDase, weak inhibition
12-amino-N-[(1R,2R)-1,3-dihydroxy-1-(4-nitrophenyl)propan-2-yl]dodecanamide
-
1R,2R-(2-N-myristoylamino-1-(4-nitrophenyl)-1,3-dihydroxypropane)
1S,2S-(2-N-myristoylamino-1-(4-nitrophenyl)-1,3-dihydroxypropane)
2,3-Butanedione
-
modification of Arg causes about 50% inhibition of forward and reverse reaction
2-bromo-N-[(2S,3R)-1,3-dihydroxynonadecan-2-yl]acetamide
-
2-bromo-N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]acetamide
-
2-bromo-N-[(2S,3R,4Z)-1,3-dihydroxyoctadec-4-en-2-yl]acetamide
-
2-chloro-N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]acetamide
-
2-chloro-N-[(2S,3R,4Z)-1,3-dihydroxyoctadec-4-en-2-yl]acetamide
-
2-mercaptoethanol
2-oxo-N-(4-phenylbutyl)-1,3-benzoxazole-3(2H)-carboxamide
3-(6-phenylhexanoyl)-1,3-oxazolidin-2-one
above, pH and temperature not specified in the publication, 9.4% inhibition at 0.02 mM
3-(cyclopropylmethyl)-5-fluoro-N-hexyl-2,4-dioxopyrimidine-1-carboxamide
-
3-benzoyl-5-fluoro-N-hexyl-2,4-dioxopyrimidine-1-carboxamide
-
3-ethyl-5-fluoro-N-hexyl-2,4-dioxopyrimidine-1-carboxamide
-
3-[4-(cyclohexyloxy)benzoyl]-1,3-oxazolidin-2-one
above, pH and temperature not specified in the publication, 18.3% inhibition at 0.02 mM
3-[6-(3-chlorophenyl)hexanoyl]-1,3-oxazolidin-2-one
above, pH and temperature not specified in the publication, 14.7% inhibition at 0.02 mM
3-[6-(4-hydroxyphenyl)hexanoyl]-1,3-oxazolidin-2-one
above, pH and temperature not specified in the publication, 4.9% inhibition at 0.02 mM
5-(benzyl(methyl)amino)-N-hexyl-2,4-dioxopyrimidine-1-carboxamide
-
5-chloro-N-hexyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
5-chloro-N-hexyl-2,4-dioxo-pyrimidine-1-carboxamide
5-cyano-N-hexyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
5-ethyl-N-hexyl-2,4-dioxopyrimidine-1-carboxamide
-
5-fluoro-N-hexyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
5-fluoro-N-hexyl-3-(2-methylpropanoyl)-2,4-dioxopyrimidine-1-carboxamide
-
5-fluoro-N-hexyl-3-methyl-2,4-dioxopyrimidine-1-carboxamide
-
5-fluoro-N-octyl-2,4-dioxopyrimidine-1-carboxamide
-
5-trifluoromethyl-N-hexyl-2,4-dioxo-pyrimidine-1-carboxamide
6-(4-fluorophenyl)-2-oxo-N-(4-phenylbutyl)-1,3-benzoxazole-3(2H)-carboxamide
-
6-(4-fluorophenyl)-2-oxo-N-(4-phenylbutyl)-1,3-benzoxazole-3(2H)-carboxamide}
in vivo plasma pharmacokinetic profile in mice, overview
6-bromo-2-oxo-N-(4-phenylbutyl)-1,3-benzoxazole-3(2H)-carboxamide
6-chloro-N-hexyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
ACER2-specific siRNA
-
-
-
beta-D-octyl glucoside
-
almost complete inhibition at 1.5% (v/v)
Bodipy-SOBRAC
-
Bodipy-SOCLAC
-
C16-ceramide
-
ceramide synthesis activity, 10 mol%, 50% inhibition
C18-ceramide
-
mtCDase, competitive inhibition, IC50: 0.62 mol%
C6-urea-ceramide
an nCDase inhibitor
cardiolipin
-
inhibits the ceramide synthesis activity: total inhibition at 2.5-5 mol%, activates the ceramidase activity, mechanism
carmofur
CDase specific RNAi
-
-
Ceranib-1
-
i.e. 3-(3-(4-methoxyphenyl)acryloyl)-6-methyl-4-phenylquinolin-2(1H)-one
Ceranib-2
-
i.e. 3-[3-(4-methoxyphenyl)acryloyl]-4-phenyl-1H-quinolin-2-one
CHAPS
cholesterol
-
0.08 mM or below, decreases the hydrolysis of ceramide by a maximum of two-thirds
cis-D-erythro-sphingosine
-
mtCDase, weak inhibition
CuCl2
-
ceramide synthesis activity, 1 mM, total inhibition
D-erythro-2-(N-myristoylamino)-1-phenyl-1-propanol
D-erythro-dehydrosphingosine
-
mtCDase, IC50: 0.25 mol%
D-erythro-sphinganine
-
mtCDase, IC50: 0.2 mol%
D-erythro-sphingosine
D-erythro-urea-C16-ceramide
-
mtCDase, competitive inhibition, IC50: 0.33 mol%
D-NMAPPD
-
-
D-threo-ceramide
-
mt-CDase, IC50: 0.21 mol%
desipramine
di-isopropyl fluorophosphate
dihydrosphingosine
-
inhibits enzyme activity by up to 40% at 0.25 mM
dithiothreitol
DL-sphinganine
recombinant CDase
ethyl 5-fluoro-3-(hexylcarbamoyl)-2,6-dioxopyrimidine-1-carboxylate
-
fatty acids
-
-
Fe3+
-
almost complete inhibition at 10 mM
gemcitabine
-
-
glycodeoxycholate
isobutyl 5-fluoro-3-(hexylcarbamoyl)-2,6-dioxopyrimidine-1-carboxylate
-
L-erythro-ceramide
-
mt-CDase, IC50: 0.26 mol%
L-erythro-sphingosine
L-threo-ceramide
-
mt-CDase, IC50: 0.11 mol%
laureate
-
at pH 5
LCL385
LCL521
a lysosomotropic prodrug inhibitor of acid ceramidase, inhibition in vivo leads to decreased cell viability
lysophosphatidic acid
-
isoenzyme I only
lysophosphatidylcholine
-
ceramide synthesis activity, 10 mol%, moderate inhibition
methyl 5-fluoro-3-(hexylcarbamoyl)-2,6-dioxopyrimidine-1-carboxylate
-
methyl 5-fluoro-3-(octylcarbamoyl)-2,6-dioxopyrimidine-1-carboxylate
-
myristaldehyde
-
competitively inhibits the ceramide synthesis activity, 2.5-3 mol%, about 50% inhibition
N,N-dimethyl-D-erythro-sphingosine
-
mtCDase, weak inhibition
N-(2-hydroxy-2-phenylethyl)dodecane-1-sulfonamide
-
N-(2-hydroxy-2-phenylethyl)tetradecanamide
N-acetylcysteine
-
-
N-bromosuccinimide
-
modification of Trp completely inhibits forward and reverse reaction
N-butyl-2,4-dioxopyrimidine-1-carboxamide
-
N-heptyl-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
N-hexyl-2,4-dioxo-5-(trifluoromethyl)-3,4-dihydropyrimidine-1(2H)-carboxamide
-
N-hexyl-2,4-dioxo-5-phenylpyrimidine-1-carboxamide
-
N-hexyl-2,4-dioxo-pyrimidine-1-carboxamide
N-hexyl-2,4-dioxohexahydropyrimidine-1-carboxamide
-
N-hexyl-3-methyl-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5,6-dimethyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
N-hexyl-5-(4-methylpiperazin-1-yl)-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5-(hydroxymethyl)-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5-bromo-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5-iodo-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5-methoxy-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5-methyl-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-carboxamide
-
N-hexyl-5-methyl-2,4-dioxo-pyrimidine-1-carboxamide
N-hexyl-5-methylamino-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-5-morpholino-2,4-dioxopyrimidine-1-carboxamide
-
N-hexyl-N-methyl-2,4-dioxopyrimidine-1-carboxamide
-
N-methyl-D-erythro-sphingosine
-
mtCDase, IC50: 0.13 mol%
N-nonyl-2,4-dioxopyrimidine-1-carboxamide
-
N-octyl-2,4-dioxo-5-(trifluoromethyl)pyrimidine-1-carboxamide
-
N-octyl-2,4-dioxopyrimidine-1-carboxamide
-
N-oleoylethanolamine
N-oleylethanolamine
-
-
N-pentyl-2,4-dioxopyrimidine-1-carboxamide
-
N-[(1R,2R)-1,3-dihydroxy-1-(4-nitrophenyl)propan-2-yl]-12-(dimethylamino)dodecanamide
-
N-[(1R,2R)-1,3-dihydroxy-1-(4-nitrophenyl)propan-2-yl]dodecane-1-sulfonamide
-
N-[(1R,2R)-1,3-dihydroxy-1-(4-nitrophenyl)propan-2-yl]tridecan-1-aminium chloride
-
N-[(1R,2R)-1,3-dihydroxy-1-phenylpropan-2-yl]tridecan-1-aminium chloride
-
N-[(1R,2S)-1-hydroxy-1-phenylpropan-2-yl]-12-(1-methylhydrazinyl)dodecanamide
-
N-[(1S,2R)-1-hydroxy-1-(4-nitrophenyl)propan-2-yl]dodecane-1-sulfonamide
-
N-[(2R)-2-hydroxy-2-(4-methylphenyl)ethyl]tetradecanamide
-
N-[(2R)-2-hydroxy-2-(pyridin-3-yl)ethyl]-12-(1-methylhydrazinyl)dodecanamide
-
N-[(2R)-2-hydroxy-2-(pyridin-4-yl)ethyl]-12-(1-methylhydrazinyl)dodecanamide
-
N-[(2S 3R)-1,3-dihydroxyoctadecan-2-yl]3-methyl-2-butenamide.
-
N-[(2S)-2-hydroxy-2-(4-methylphenyl)ethyl]tetradecanamide
-
N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]2,2-dibromoacetamide
strong inhibition
N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]2-bromoacetamide
strong inhibition
N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]2-methylacrylamide
strong inhibition
N-[(2S,3R)-1,3-dihydroxyoctadecan-2-yl]acrylamide
-
N-[(2S,3R,4E)-14-azido-1,3-dihydroxytetradec-4-en-2-yl]-2-bromoacetamide
-
N-[2-(4-butylphenyl)-2-hydroxyethyl]tetradecanamide
-
N-[2-(4-ethylphenyl)-2-hydroxyethyl]tetradecanamide
-
N-[2-(4-fluorophenyl)-2-hydroxyethyl]tetradecanamide
-
N-[2-(4-tert-butylphenyl)-2-hydroxyethyl]tetradecanamide
-
N-[2-hydroxy-2-(3-hydroxyphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(3-methoxyphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(3-methylphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(4-hydroxyphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(4-methoxyphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(4-methylphenyl)ethyl]dodecane-1-sulfonamide
-
N-[2-hydroxy-2-(4-methylphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(4-propylphenyl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(pyridin-3-yl)ethyl]-12-(1-methylhydrazinyl)dodecanamide
-
N-[2-hydroxy-2-(pyridin-3-yl)ethyl]dodecane-1-sulfonamide
-
N-[2-hydroxy-2-(pyridin-3-yl)ethyl]tetradecanamide
-
N-[2-hydroxy-2-(pyridin-4-yl)ethyl]dodecane-1-sulfonamide
-
N-[2-hydroxy-2-(pyridin-4-yl)ethyl]tetradecanamide
NCDase siRNA
-
-
-
oleoylethanolamide
palmitaldehyde
-
ceramide synthesis activity, 2.5-3 mol%, about 50% inhibition
palmitate
-
at pH 5
phorbol myristate acetate
-
phorbol myristate acetate, PMA, decreases the expression of ACER2 in HeLa cells
phosphate
80% inhibition at 100 mM
phosphatidic acid
phosphatidylcholine
phosphatidylglycerol
-
ceramide synthesis activity, 10 mol%, moderate inhibition
phosphatidylserine
phytosphingosine
SABRAC
an acid ceramidase inhibitor
siRNA
-
Sn2+
-
at 10 mM
sodium cholate
-
ceramide synthesis
sphinganine
sphingenine
-
-
sphingomyelin
sphingosine
taurocholate
taurodeoxycholate
Triton X-100
urea-hexanoyl-ceramide
ZnCl2
-
ceramide synthesis activity, 1 mM, total inhibition
additional information
-