3.1.25.1: deoxyribonuclease (pyrimidine dimer)

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For detailed information about deoxyribonuclease (pyrimidine dimer), go to the full flat file.

Word Map on EC 3.1.25.1

3.1.25.1

glycosylase

strand

comet

thymine

genotoxic

formamidopyrimidine

cyclobutane

formamidopyrimidine-dna

incision

abasic

uv-induced

endonucleases

uv-irradiated

photoproducts

duplex

xeroderma

pigmentosum

dimer-specific

endoiii

8-oxoguanine

beta-elimination

8-oxog

repair-deficient

alkali-labile

apyrimidinic

ultraviolet-irradiated

photolyase

lesion-specific

apurinic

uv-damaged

helix-hairpin-helix

iii-sensitive

dna-glycosylase

7,8-dihydro-8-oxoguanine

fpg-sensitive

8-hydroxyguanine

3-methyladenine-dna

uracil-dna

5-hydroxycytosine

incises

cis-syn

dipyrimidine

medicine

molecular biology

repair-proficient

dimer-containing

enzyme-dna

8-oxo-7,8-dihydroguanine

analysis

mitogenome

excision-repair

photoreactivation

5-hydroxyuracil

Reaction

endonucleolytic cleavage near pyrimidine dimers to products with 5'-phosphate =

Synonyms

ApeI, bacteriophage T4 endodeoxyribonuclease V, bacteriophage T4 endonuclease V, correndonuclease I, correndonuclease II, endodeoxyribonuclease (pyrimidine dimer), endonuclease II, endonuclease III, endonuclease V, Escherichia coli UV endonuclease, excision endonuclease UvrABC, excision nuclease UvrABC, More, nuclease V, bacteriophage T4 endodeoxyribonuclease V, nuclease, Escherichia coli UV-endodeoxyribonuclease, Py-Py-correndonuclease, ribosomal protein S3, rpS3, T4 Endo V, T4 endonuclease V, T4N5, type I AP endonuclease, UvrA, UvrABC nuclease, UvrB, UvrC

ECTree

3 Hydrolases

3.1 Acting on ester bonds

3.1.25 Site-specific endodeoxyribonucleases that are specific for altered bases

3.1.25.1 deoxyribonuclease (pyrimidine dimer)

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Results	in table
5	Activating Compound
35	AA Sequence
4	Application
3	CAS Registry Number
14	Cloned(Commentary)
2	Crystallization (Commentary)
219	Disease/ Diagnostics
2	General Information
1	General Stability
24	Inhibitors
4	KM Value [mM]
1	Localization
17	Metals/Ions
14	Molecular Weight [Da]
36	Natural Substrates/ Products (Substrates)
1	Organic Solvent Stability
38	Organism
6	PDB ID
19	pH Optimum
3	pH Range
1	pH Stability
1	Posttranslational Modification
42	Protein Variants
21	Purification (Commentary)
45	Reaction
4	Reaction Type
38	Reference
1	Renatured (Commentary)
11	Source Tissue
10	Specific Activity [micromol/min/mg]
13	Storage Stability
113	Substrates and Products (Substrate)
4	Subunits
48	Synonyms
8	Temperature Optimum [°C]
8	Temperature Stability [°C]
4	Turnover Number [1/s]

Posttranslational Modification

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Posttranslational Modification on EC 3.1.25.1 - deoxyribonuclease (pyrimidine dimer)

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side-chain modification

Tequatrovirus T4

methylation, after treatment with CH2O and NaCNBH3, N-terminal alpha-amino group is preferentially methylated, glycosylase and endonuclease activity are reduced to 20% if 0.8 methylations are present per enzyme molecule, with 4.4 methyl groups per enzyme both nicking and DNA-binding are abolished

170714