3.1.13.5: ribonuclease D

This is an abbreviated version!
For detailed information about ribonuclease D, go to the full flat file.

Word Map on EC 3.1.13.5

3.1.13.5

rnase

antiproliferative

transposon

trna

deadenylases

ccr4-associated

Reaction

exonucleolytic cleavage that removes extra residues from the 3'-terminus of tRNA to produce 5'-mononucleotides =

Synonyms

RNase D

ECTree

3 Hydrolases

3.1 Acting on ester bonds

3.1.13 Exoribonucleases producing 5′-phosphomonoesters

3.1.13.5 ribonuclease D

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Results	in table
1	Activating Compound
11321	AA Sequence
1	CAS Registry Number
2	Cloned(Commentary)
1	Crystallization (Commentary)
2	Expression
6	General Information
6	Inhibitors
2	Localization
6	Metals/Ions
2	Molecular Weight [Da]
6	Natural Substrates/ Products (Substrates)
9	Organism
1	Pathway
8	PDB ID
2	pH Optimum
1	pH Range
1	pI Value
1	Posttranslational Modification
2	Protein Variants
5	Purification (Commentary)
1	Reaction
9	Reference
2	Specific Activity [micromol/min/mg]
1	Storage Stability
12	Substrates and Products (Substrate)
1	Subunits
3	Synonyms
1	Temperature Optimum [°C]
2	Temperature Stability [°C]

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Reference on EC 3.1.13.5 - ribonuclease D

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662077

Ghosh, R.K.; Deutscher, M.P.

Identification of an Escherichia coli nuclease acting on structurally altered transfer RNA molecules

J. Biol. Chem.

253

997-1000

1978

Escherichia coli

342522

662078

Cudny, H.; Zaniewski, R.; Deutscher, M.P.

Escherichia coli RNase D. Purification and structural characterization of a putative processing nuclease

J. Biol. Chem.

256

5627-5632

1981

Escherichia coli

6263885

662079

Cudny, H.; Zaniewski, R.; Deutscher, M.P.

Escherichia coli RNase D. Catalytic properties and substrate specificity

J. Biol. Chem.

256

5633-5637

1981

Escherichia coli

6263886

662081

Blouin, R.T.; Zaniewski, R.; Deutscher, M.P.

Ribonuclease D is not essential for the normal growth of Escherichia coli or bacteriophage T4 or for the biosynthesis of a T4 suppressor tRNA

J. Biol. Chem.

258

1423-1426

1983

Escherichia coli

6337139

662086

Zhang, J.R.; Deutscher, M.P.

Transfer RNA is a substrate for RNase D in vivo

J. Biol. Chem.

263

17909-17912

1988

Escherichia coli

3056931

662965

Zhang, J.R.; Deutscher, M.P.

Escherichia coli RNase D: sequencing of the rnd structural gene and purification of the overexpressed protein

Nucleic Acids Res.

6265-6278

1988

Escherichia coli

3041371

663415

Zuo, Y.; Wang, Y.; Malhotra, A.

Crystal structure of Escherichia coli RNase D, an exoribonuclease involved in structured RNA processing

Structure

973-984

2005

Escherichia coli

16004870

715578

Zimmer, S.L.; McEvoy, S.M.; Li, J.; Qu, J.; Read, L.K.

A novel member of the RNase D exoribonuclease family functions in mitochondrial guide RNA metabolism in Trypanosoma brucei

J. Biol. Chem.

286

10329-10340

2011

Trypanosoma brucei (Q38DE2), Trypanosoma brucei 29-13 (Q38DE2)

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